mRNA_Ecto-sp13_S_contig17184.5090.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: D7G110_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G110_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 8.460e-157 Identity = 289/319 (90.60%), Postives = 294/319 (92.16%), Query Frame = 1
Query: 1 PLAFTLPPPLRPSLRFADDTRDVRGGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRGRSGRRSSRIEASPAFGTGITAGPRLRAAGSPLKRAFSWGRGRRSREDEVGGVMVDSTXXXXXXXXXXXXXXXXXGGNDKVGGTVGGAMEAEGPASFKLGADLMTDLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
PLAF LPP LRPSLRFADDTRDVRGGRR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SRG GRRSSRIEA PAFGTG AGPRLRA GSPLK+AFSWGRG +SR + VGGV VDS XXXXXXXXXX GG+DKVGG VGGAMEAEGPASFKLGADLMTDLKRRAK YKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAF GQPMTF+GPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE
Sbjct: 58 PLAFALPPSLRPSLRFADDTRDVRGGRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRGMGGRRSSRIEAYPAFGTGTAAGPRLRAVGSPLKKAFSWGRGLQSRGEGVGGVRVDSISSAAXXXXXXXXXXT--GGSDKVGGAVGGAMEAEGPASFKLGADLMTDLKRRAKFYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFGGQPMTFIGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 374
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A0G4H159_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H159_VITBC) HSP 1 Score: 209 bits (532), Expect = 6.190e-58 Identity = 97/154 (62.99%), Postives = 121/154 (78.57%), Query Frame = 1
Query: 496 LMTDLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
L D+ RR YKSDW DG+ KS+PA++F+YFACL PAVAFGGIA +T G++GV E++V+CG GGM Y+ FSGQPMTF+GPTGLTLAF T+LY+F LPF+P+Y+W GLWTS +L LA GA LI++ TQFTDDVFNALL+ NF+YE
Sbjct: 177 LRQDIARRRPFYKSDWLDGLRPKSIPAVLFMYFACLAPAVAFGGIAASITGGSMGVPEFLVACGCGGMAYSVFSGQPMTFIGPTGLTLAFTTALYAFCRQWSLPFMPLYSWTGLWTSLWLMLLAVAGAPELIKYCTQFTDDVFNALLACNFVYE 330
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A836CJA6_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA6_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.060e-57 Identity = 97/150 (64.67%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 508 LKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
L +R LYK DW G KSL F+YFACL+PAVAFGG A QVT G +GV+EY+V+CG G+ Y+ FSGQPMTF GPTGLTLAF+T+L++FTS A LPFLPVY W GLWTSA + LA GASNL+ +ATQFTDDVFNAL+++NF+ E
Sbjct: 27 LLQRLPLYKDDWKTGFRAKSLSTTAFMYFACLMPAVAFGGFAQQVTGGAMGVVEYLVACGGSGVAYSLFSGQPMTFTGPTGLTLAFITALHAFTSAAALPFLPVYTWCGLWTSALMVALAAGGASNLVRYATQFTDDVFNALIALNFLAE 176
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A7S1TE13_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE13_9RHOD) HSP 1 Score: 199 bits (507), Expect = 1.440e-57 Identity = 95/175 (54.29%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 448 GAMEAEGPASFKLGADLMT-----DLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
G +++ G F+ G T DL RR LY SDW +G+ KS+PA+MFLYFACL P +AFGG+ +T G +G++E++VS + GM YAAFSGQP+T +GPTGLTLAF T+LYSF GLPFLP+Y+WVGLWT A L L AS++I + T+FTDDVFN+L++ NF+YE
Sbjct: 56 GEVDSLGGDEFRFGLTRWTEGVRGDLARRVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYE 230
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A7S1TD95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD95_9RHOD) HSP 1 Score: 199 bits (507), Expect = 8.560e-56 Identity = 95/175 (54.29%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 448 GAMEAEGPASFKLGADLMT-----DLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
G +++ G F+ G T DL RR LY SDW +G+ KS+PA+MFLYFACL P +AFGG+ +T G +G++E++VS + GM YAAFSGQP+T +GPTGLTLAF T+LYSF GLPFLP+Y+WVGLWT A L L AS++I + T+FTDDVFN+L++ NF+YE
Sbjct: 56 GEVDSLGGDEFRFGLTRWTEGVRGDLARRVPLYVSDWKEGLTLKSIPAVMFLYFACLAPVIAFGGLTATLTGGAIGLVEFLVSASVAGMAYAAFSGQPLTLIGPTGLTLAFTTALYSFCGRYGLPFLPMYSWVGLWTGAILFFLVIFNASDMIRYCTRFTDDVFNSLIATNFLYE 230
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A7S1FU71_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU71_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.040e-55 Identity = 94/171 (54.97%), Postives = 127/171 (74.27%), Query Frame = 1
Query: 454 MEAEGPASFKL-GADLMTDLKRRAKLYKSDWSDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
+ A+ P F L D+ DL RR LY SDW+DG R ++PA++FLYF+CL PA++FG +A+Q+TQG++G++E++ S G+ GM YA +GQPM F+ PTGLTLAF++ L+ F V+ LPF PVYAWVGLWTS F+ L GAS LI + T+FTD+VFN+LLS+NFIYE
Sbjct: 91 LHAKRPFPFHLISQDMRDDLSRRLPLYASDWTDGFRDKRTTVPAVLFLYFSCLAPAISFGAVASQITQGSIGIVEFLFSSGVAGMAYAILAGQPMAFIAPTGLTLAFISGLFRFCQVSALPFFPVYAWVGLWTSLFMIALGLGGASKLIRYCTRFTDEVFNSLLSMNFIYE 261
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: B7FQY4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQY4_PHATC) HSP 1 Score: 199 bits (507), Expect = 2.830e-55 Identity = 95/157 (60.51%), Postives = 120/157 (76.43%), Query Frame = 1
Query: 493 DLMTDLKRRAKLYKSDWSDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
++ D++RR K+Y SDW DG RK +PAI+FLYFACL PAV+FG IA+++TQG++G++E+++S GL GM YA GQPM F+ PTGLTLAF++ LY F V LPF P+YAWVGLWTS F L G+S LI F T+FTD+VFNALLSVNFIYE
Sbjct: 167 EMRDDIRRRKKVYWSDWEDGFKNKRKVIPAILFLYFACLSPAVSFGTIASEITQGSIGIVEFLLSSGLSGMAYAMMCGQPMAFIAPTGLTLAFISGLYRFCMVKALPFFPIYAWVGLWTSFFFVLLGLGGSSQLIRFCTRFTDEVFNALLSVNFIYE 323
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: W7TSJ0_9STRA (Anion exchanger family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSJ0_9STRA) HSP 1 Score: 199 bits (506), Expect = 4.360e-55 Identity = 94/154 (61.04%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 496 LMTDLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
+ D R LYKSDW DGV K+LP I+FLYFACL PAVAFGGI+ +TQG +GVIE++VSCG+ GM YA FSGQPMTF+GPTGLTL FM +L++F S G+ F+P+Y WVG+WTS L L+ A +L + T+FTD+VFNALL++NFIYE
Sbjct: 170 IREDFSNRLPLYKSDWVDGVKGKTLPTILFLYFACLAPAVAFGGISYGLTQGAMGVIEFLVSCGMSGMLYAIFSGQPMTFIGPTGLTLCFMAALFNFCSSFGVAFMPMYTWVGIWTSLMLGLLSSANACSLTKHCTRFTDEVFNALLALNFIYE 323
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A7S3XU83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU83_HETAK) HSP 1 Score: 195 bits (495), Expect = 1.670e-54 Identity = 95/170 (55.88%), Postives = 127/170 (74.71%), Query Frame = 1
Query: 454 MEAEGPASFKLG--ADLMTDLKRRAKLYKSDWSDGVNRKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
M+ + +FK+ DL DLK R L+ DW DG+ +++ A +FLYFACL PAVAFGG++ +T G LGV+E +++ G GG Y+ SGQPMTF+GPTGLTL F +L+SF ++ GLPFLP+++WVGLWTS FLA L+ GASN I++ TQFTDDVFN+LL+VNF+YE
Sbjct: 24 MQQKTKETFKIQFMKDLKEDLKNRLPLWVQDWRDGLAPQTVAASLFLYFACLAPAVAFGGLSAALTGGQLGVVEVLMATGFGGAAYSFLSGQPMTFIGPTGLTLVFTAALHSFCALRGLPFLPMFSWVGLWTSGFLALLSATGASNGIKYCTQFTDDVFNSLLAVNFVYE 193
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Match: A0A7S2YSC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSC6_9STRA) HSP 1 Score: 189 bits (481), Expect = 9.150e-54 Identity = 90/165 (54.55%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 469 PASFKLGADLMTDLKRRAKLYKSDWSDGVN--RKSLPAIMFLYFACLLPAVAFGGIATQVTQGTLGVIEYVVSCGLGGMTYAAFSGQPMTFVGPTGLTLAFMTSLYSFTSVAGLPFLPVYAWVGLWTSAFLATLAFVGASNLIEFATQFTDDVFNALLSVNFIYE 957
P + + D +D+K R +YKSDW DG +K PAI FLYFACL PAV+FG I++ +T TLG++EY++S L GM Y+ GQPM F+ PTGLTLAF++ LY F + GLPF P+Y+WVG+WTS L GA +LI F T+FTD+VFNALLS+NFIYE
Sbjct: 128 PLDYIVSQDFRSDVKNRRAVYKSDWVDGFKDLKKCFPAISFLYFACLAPAVSFGTISSLITHNTLGIVEYMLSTSLSGMAYSLICGQPMAFIAPTGLTLAFISGLYRFCTQKGLPFFPIYSWVGIWTSVLFIILGLGGAGSLIRFCTRFTDEVFNALLSLNFIYE 292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17184.5090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17184.5090.1 >prot_Ecto-sp13_S_contig17184.5090.1 ID=prot_Ecto-sp13_S_contig17184.5090.1|Name=mRNA_Ecto-sp13_S_contig17184.5090.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp PLAFTLPPPLRPSLRFADDTRDVRGGRRQAGGRRAVAASAASRGGATSMFback to top mRNA from alignment at Ecto-sp13_S_contig17184:423..3743- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17184.5090.1 ID=mRNA_Ecto-sp13_S_contig17184.5090.1|Name=mRNA_Ecto-sp13_S_contig17184.5090.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3321bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17184:423..3743- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17184:423..3743- >mRNA_Ecto-sp13_S_contig17184.5090.1 ID=mRNA_Ecto-sp13_S_contig17184.5090.1|Name=mRNA_Ecto-sp13_S_contig17184.5090.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17184:423..3743- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |