mRNA_Ecto-sp13_S_contig17182.5088.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI) HSP 1 Score: 820 bits (2118), Expect = 2.010e-293 Identity = 408/436 (93.58%), Postives = 412/436 (94.50%), Query Frame = 1
Query: 1 RKQAAFFGCPRHQGTTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCS-----CELC 1293
RKQAAFFGCPRHQGTTDRRFP+S ATLGACP AMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVAT TGTVDDFTKEFKDIFRRYIPHRRQYH QRSAF+ETL TLEEGTVV VFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQD+AWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMV DTNGESTNVPVHIEHHYFGSCHGKSSSDSEG NTKGVTR N INQSWVVQSPRHL TLLGESMDF+L EPTE EAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGR YIF AAG ISGAVRSACRSEAKAIKVQ CQAISKTVATETPGVL TYTLSCS C LC
Sbjct: 298 RKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLCTLLGESMDFMLLEPTEDEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRKYIFQAAGAISGAVRSACRSEAKAIKVQGCQAISKTVATETPGVLATYTLSCSHDPLSCRLC 733
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 568 bits (1465), Expect = 4.760e-185 Identity = 309/495 (62.42%), Postives = 342/495 (69.09%), Query Frame = 1
Query: 43 TTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVW--------GGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
++DRRFPAS+A LGA EGQ G+ P DDDDGDW PRVASD+SRPKK + P + ++ + T V VFDFQEQL+L+EQDEVQ+QHWQHE VTIFPCPI+ KWKGR DNAWVQHVMFKI+TEHVPALMRKLGAPAMV AIFFTDNCAKQFKCRFHFGWLAS VM+RD NG STNVPVH+EHHYFGSCHG S SDSEG NTK TRQN INQ+WVVQ PRHLSTLLGESMDFIL EPTE+E M FE +RTSSRGGDQLL+TK GG + + ++PNTLLGR YIF AAGDI AVRSA RSE+KAIKV+ CQ ISK VATETPGV+ TYTLSC G+TEKCNLFREGIMEA AEWSRRRS+DDEE KEREMELMFTRMR+ LPYGSVALMRV PEEY+G D+
Sbjct: 376 SSDRRFPASSAALGAIASTSEGQAGK-------------------------PTDDDDGDWAPRVASDSSRPKKLTIS--------------------PKNSEKYSGDTLLTGGSTTPNGAHSVFVFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGGDQLLVTKTCIIGTEEGVGGRKQMQGEEDFSGHEEPNTLLGRKYIFQAAGDIPPAVRSASRSESKAIKVEGCQVISKIVATETPGVVATYTLSCL-----KGETEKCNLFREGIMEAPAEWSRRRSNDDEETTKEREMELMFTRMRNPLPYGSVALMRVRPEEYRGLDI 805
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 4.700e-160 Identity = 247/341 (72.43%), Postives = 268/341 (78.59%), Query Frame = 1
Query: 511 IYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCS----------CELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
IYFKWKGRVW+ SFQVLSDDRTQDNAW Q VMFK++TEHVP LMRKLGAPAMV AIFFTDNCAK+FKCR HFGWLAS V++RD NGESTNVPVH EHHYFGSCHGKS VQSPRHL TLLGES+DFIL EPT KE MTFE +RTSS GGDQLL+T VWG ESR E KT L+TKKPNTLLGR +IF AAGDI AVRSA RSE KAIKV+ CQA SK VATETPGV+ TYTL S CELCR G+TEKCNLFREGIMEA AEWSRRRS+DDEE K+RE+ELMFTRMR+ LPYGSVALMRV PE+Y+GQD+
Sbjct: 120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKS-----------------------VQSPRHLCTLLGESVDFILEEPT-KEEMTFEASRTSSSGGDQLLVTTVWGSESRCKEGKTFLVTKKPNTLLGRKHIFQAAGDILHAVRSASRSELKAIKVEGCQANSKIVATETPGVVATYTLEVSRRTVGSSCFCCELCRKGETEKCNLFREGIMEAPAEWSRRRSNDDEETTKKREIELMFTRMRNPLPYGSVALMRVRPEQYRGQDI 436
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 1.460e-150 Identity = 253/509 (49.71%), Postives = 325/509 (63.85%), Query Frame = 1
Query: 4 KQAAFFGCPRHQGTTDRRF--PASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDA----RRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGG-DQLLMTKVWGGE-SRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIP-KEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
KQ FF CP+++G DR+ A A +GA P PG V+W FT+VD G+AT A RR +DD D++P + R ++AVA TGTVD+F E KD + HRR Y TQR+AF E LT+EEG V+ + DFQE+LQ+ EQDEVQ+QHW E+ TIFPCPI+FK GRVW+YSFQ+LSDD QDNAWVQ VM K+L E +PAL+RK+GA M +TDNCAKQFKCRFHFGW+A +M D +GE T + VH+EHHYFG+CHGK+ SD+EG TK R+ +N W V S R L L ++++F L +E F R GG +QLL+TK W GE S + T L+TK PNT++GR YIF A D+S VR A RS AK I+V CQ IS T AT+TPGVL T SC C +CR+ K E C L R+GIM E+SRR + + + + KE ++E + M S LP+GS+AL+RV E+ GQD+
Sbjct: 440 KQERFFDCPKNKGNADRQLNPAAGPAQVGAPP------PGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDP-LGGSKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDRNGREGGTEQLLVTKTWIGEDSDQTQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLLTNQFSCYCAVCRDSKPENCPLIRKGIMSGPQEFSRRANRNTDIVSAKEDDLEELSGWMPSQLPFGSIALLRVDTSEHDGQDI 941
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 1.020e-141 Identity = 237/408 (58.09%), Postives = 264/408 (64.71%), Query Frame = 1
Query: 379 TLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSC---------------------------------SCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
T LTLEEGTVV VFDFQEQ QL+EQDEVQ+QHWQH+SVTIF CPIY KWK R+W+YS+QVLSDDRTQDNAW +P +FFTDNCAKQFKCRFHFGWLAS VM+RD +GESTNVPVH+EHHYFGSCHGKS VQ PRHL TLLGESMDFIL EPTE+E + FE +RTSSR GDQLLMTK+ R +I AAGDI AVRSA RSE+KAI+V+ CQ I K VATETPGV+ TYTLSC SCELCR G+TE+CNL REGIME AEWSRRRS+DDEE KEREME++ TRMR LPYGSVALM V PEEY+GQD+
Sbjct: 14 TSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAWA-----------LPPWCE----------LFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKS-----------------------VQGPRHLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRGDQLLMTKII-----------------------RKFILQAAGDILPAVRSASRSESKAIRVEGCQPICKIVATETPGVVATYTLSCLNFHDGPWSVAPIGVFYLLDLVSMSHFPALLSASCELCRKGETEECNLLREGIMEGPAEWSRRRSNDDEEATKEREMEVILTRMRIPLPYGSVALMPVRPEEYRGQDI 354
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE) HSP 1 Score: 369 bits (947), Expect = 2.560e-121 Identity = 194/296 (65.54%), Postives = 213/296 (71.96%), Query Frame = 1
Query: 427 QEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGK-----------------------------SSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISK 1227
QE+LQL+EQDEVQ QHWQHE+VTIFPCPIYFKWKGRVW+YSFQVLSD R + V A AP M+ AIFFTDNCAKQFKCRFHFGWLAS V++RD NG STNVPVH+EHH+FGSCHGK S SD +G NTKG T QN INQ+WVVQ PRHL TLLGE+MDFIL EPTE+E M FE + TSSRGGDQLLMTK+WGGESR ERKT L+TKKPNTLLGR YIF AAGDI AVRSA RSE+KAIKV+ CQAISK
Sbjct: 34 QEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG-------------QRVGAAC----APTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGGDQLLMTKLWGGESRCKERKTFLVTKKPNTLLGRKYIFQAAGDILPAVRSASRSESKAIKVEGCQAISK 312
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI) HSP 1 Score: 382 bits (982), Expect = 4.640e-121 Identity = 205/372 (55.11%), Postives = 249/372 (66.94%), Query Frame = 1
Query: 4 KQAAFFGCPRHQGTTDRRF-PASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWG------GESRS--DERKTLLI 1092
+Q FFGCPR++G DR PAST++ P A G V+WSMF +VD GRA R G D PKK V GTVD+F +E ++I Y HRRQ+H QRS FNETL TLEEG VV V DFQEQLQL EQDEVQ+QHWQHESVTIFP PIYFK +GRVW YSFQVL+DDRTQDN WVQ+VM ++L+ HVP L+RK+GA M AI FTDNCAKQFKCRFHFGW+A VM+RD++G +T++ + +EHHYFGSCHGKS+SDSEG TK R N +N SWVV++P HL LL + F+L E + EA F ++ SRGG QLL+TKV G+ R D+R TL++
Sbjct: 430 RQDRFFGCPRNRGGIDRDLGPASTSSSTIHP-AGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANA-GGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCELLAKEFSFLLQEASPDEADRFYEDKSHSRGGQQLLVTKVCDHQLPPTGKDRPIPDDRSTLVV 799
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE) HSP 1 Score: 137 bits (344), Expect = 4.880e-33 Identity = 76/108 (70.37%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1144 GDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALM 1467
G I A+RSA RSE+KAIKV+ CQ ISK VATETPGV+ TYT G+TEKCNLFREGIMEA AEWSRRRS+DDEE +ER+MELMFTR R+ LPYGSVALM
Sbjct: 11 GGILPAIRSASRSESKAIKVEGCQVISKIVATETPGVVATYT-----RRPWKGETEKCNLFREGIMEAPAEWSRRRSNDDEETTRERKMELMFTRTRNPLPYGSVALM 113
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JW27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW27_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.390e-10 Identity = 41/90 (45.56%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 1 RKQAAFFGCPRHQGTTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVA 270
R+QAAFFGCPRH +TDRR AS+A LGA EGQ G+ P DDDDGDW +VASD+ R KK A
Sbjct: 91 RRQAAFFGCPRHHVSTDRRVLASSAALGAMASTSEGQAGK-------------------------PADDDDGDWATKVASDSPRTKKVNA 155
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: V3ZMP6_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZMP6_LOTGI) HSP 1 Score: 72.4 bits (176), Expect = 8.000e-10 Identity = 56/213 (26.29%), Postives = 91/213 (42.72%), Query Frame = 1
Query: 220 WEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKG--RVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEG 852
W + + + A+ +GTV + K+ H Q++ F ++V+V DF E + Q+EVQ+ HW VT+ P +++ + + ++SDD D H + + V L+ G L I F+D C+ Q+K + F L+ A E +P+ +EHHYFGS HGK+ D EG
Sbjct: 190 WGQTTYGNEGKKRVALLRSSGTVKQLVDQLKEELISLSTHLFIARWQQNVFYTITKNPPTNSIVMVMDFAENYLCVMQNEVQSAHWYQMQVTLHPMLCFYRCDTCEKTVREAINIISDDMQHD----AHAVRCFVETAVCHLINVRGLNPQRL-IKFSDGCSSQYKSKTPFVDLSFAA--------EDLEIPI-VEHHYFGSRHGKNQCDGEG 388 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17182.5088.1 >prot_Ecto-sp13_S_contig17182.5088.1 ID=prot_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp MEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSback to top mRNA from alignment at Ecto-sp13_S_contig17182:2..3745+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17182.5088.1 ID=mRNA_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17182:2..3745+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17182:2..3745+ >mRNA_Ecto-sp13_S_contig17182.5088.1 ID=mRNA_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17182:2..3745+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |