mRNA_Ecto-sp13_S_contig17182.5088.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17182.5088.1
Unique NamemRNA_Ecto-sp13_S_contig17182.5088.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI)

HSP 1 Score: 820 bits (2118), Expect = 2.010e-293
Identity = 408/436 (93.58%), Postives = 412/436 (94.50%), Query Frame = 1
Query:    1 RKQAAFFGCPRHQGTTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCS-----CELC 1293
            RKQAAFFGCPRHQGTTDRRFP+S ATLGACP AMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVAT TGTVDDFTKEFKDIFRRYIPHRRQYH QRSAF+ETL TLEEGTVV VFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQD+AWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMV DTNGESTNVPVHIEHHYFGSCHGKSSSDSEG NTKGVTR N INQSWVVQSPRHL TLLGESMDF+L EPTE EAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGR YIF AAG ISGAVRSACRSEAKAIKVQ CQAISKTVATETPGVL TYTLSCS     C LC
Sbjct:  298 RKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLCTLLGESMDFMLLEPTEDEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRKYIFQAAGAISGAVRSACRSEAKAIKVQGCQAISKTVATETPGVLATYTLSCSHDPLSCRLC 733          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 568 bits (1465), Expect = 4.760e-185
Identity = 309/495 (62.42%), Postives = 342/495 (69.09%), Query Frame = 1
Query:   43 TTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVW--------GGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
            ++DRRFPAS+A LGA     EGQ G+                         P DDDDGDW PRVASD+SRPKK   +                    P   + ++  +       T      V VFDFQEQL+L+EQDEVQ+QHWQHE VTIFPCPI+ KWKGR               DNAWVQHVMFKI+TEHVPALMRKLGAPAMV AIFFTDNCAKQFKCRFHFGWLAS  VM+RD NG STNVPVH+EHHYFGSCHG S SDSEG NTK  TRQN INQ+WVVQ PRHLSTLLGESMDFIL EPTE+E M FE +RTSSRGGDQLL+TK          GG  +    +     ++PNTLLGR YIF AAGDI  AVRSA RSE+KAIKV+ CQ ISK VATETPGV+ TYTLSC       G+TEKCNLFREGIMEA AEWSRRRS+DDEE  KEREMELMFTRMR+ LPYGSVALMRV PEEY+G D+
Sbjct:  376 SSDRRFPASSAALGAIASTSEGQAGK-------------------------PTDDDDGDWAPRVASDSSRPKKLTIS--------------------PKNSEKYSGDTLLTGGSTTPNGAHSVFVFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGGDQLLVTKTCIIGTEEGVGGRKQMQGEEDFSGHEEPNTLLGRKYIFQAAGDIPPAVRSASRSESKAIKVEGCQVISKIVATETPGVVATYTLSCL-----KGETEKCNLFREGIMEAPAEWSRRRSNDDEETTKEREMELMFTRMRNPLPYGSVALMRVRPEEYRGLDI 805          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 4.700e-160
Identity = 247/341 (72.43%), Postives = 268/341 (78.59%), Query Frame = 1
Query:  511 IYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCS----------CELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
            IYFKWKGRVW+ SFQVLSDDRTQDNAW Q VMFK++TEHVP LMRKLGAPAMV AIFFTDNCAK+FKCR HFGWLAS  V++RD NGESTNVPVH EHHYFGSCHGKS                       VQSPRHL TLLGES+DFIL EPT KE MTFE +RTSS GGDQLL+T VWG ESR  E KT L+TKKPNTLLGR +IF AAGDI  AVRSA RSE KAIKV+ CQA SK VATETPGV+ TYTL  S          CELCR G+TEKCNLFREGIMEA AEWSRRRS+DDEE  K+RE+ELMFTRMR+ LPYGSVALMRV PE+Y+GQD+
Sbjct:  120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKS-----------------------VQSPRHLCTLLGESVDFILEEPT-KEEMTFEASRTSSSGGDQLLVTTVWGSESRCKEGKTFLVTKKPNTLLGRKHIFQAAGDILHAVRSASRSELKAIKVEGCQANSKIVATETPGVVATYTLEVSRRTVGSSCFCCELCRKGETEKCNLFREGIMEAPAEWSRRRSNDDEETTKKREIELMFTRMRNPLPYGSVALMRVRPEQYRGQDI 436          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 1.460e-150
Identity = 253/509 (49.71%), Postives = 325/509 (63.85%), Query Frame = 1
Query:    4 KQAAFFGCPRHQGTTDRRF--PASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDA----RRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGG-DQLLMTKVWGGE-SRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIP-KEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
            KQ  FF CP+++G  DR+    A  A +GA P      PG V+W  FT+VD  G+AT A    RR        +DD D++P +     R ++AVA  TGTVD+F  E KD    +  HRR Y TQR+AF E  LT+EEG V+ + DFQE+LQ+ EQDEVQ+QHW  E+ TIFPCPI+FK  GRVW+YSFQ+LSDD  QDNAWVQ VM K+L E +PAL+RK+GA  M     +TDNCAKQFKCRFHFGW+A   +M  D +GE T + VH+EHHYFG+CHGK+ SD+EG  TK   R+  +N  W V S R L   L ++++F L     +E   F   R    GG +QLL+TK W GE S   +  T L+TK PNT++GR YIF  A D+S  VR A RS AK I+V  CQ IS T AT+TPGVL T   SC C +CR+ K E C L R+GIM    E+SRR + + + +  KE ++E +   M S LP+GS+AL+RV   E+ GQD+
Sbjct:  440 KQERFFDCPKNKGNADRQLNPAAGPAQVGAPP------PGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDP-LGGSKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDRNGREGGTEQLLVTKTWIGEDSDQTQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLLTNQFSCYCAVCRDSKPENCPLIRKGIMSGPQEFSRRANRNTDIVSAKEDDLEELSGWMPSQLPFGSIALLRVDTSEHDGQDI 941          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 1.020e-141
Identity = 237/408 (58.09%), Postives = 264/408 (64.71%), Query Frame = 1
Query:  379 TLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSC---------------------------------SCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALMRVHPEEYQGQDV 1503
            T LTLEEGTVV VFDFQEQ QL+EQDEVQ+QHWQH+SVTIF CPIY KWK R+W+YS+QVLSDDRTQDNAW            +P              +FFTDNCAKQFKCRFHFGWLAS  VM+RD +GESTNVPVH+EHHYFGSCHGKS                       VQ PRHL TLLGESMDFIL EPTE+E + FE +RTSSR GDQLLMTK+                        R +I  AAGDI  AVRSA RSE+KAI+V+ CQ I K VATETPGV+ TYTLSC                                 SCELCR G+TE+CNL REGIME  AEWSRRRS+DDEE  KEREME++ TRMR  LPYGSVALM V PEEY+GQD+
Sbjct:   14 TSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAWA-----------LPPWCE----------LFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKS-----------------------VQGPRHLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRGDQLLMTKII-----------------------RKFILQAAGDILPAVRSASRSESKAIRVEGCQPICKIVATETPGVVATYTLSCLNFHDGPWSVAPIGVFYLLDLVSMSHFPALLSASCELCRKGETEECNLLREGIMEGPAEWSRRRSNDDEEATKEREMEVILTRMRIPLPYGSVALMPVRPEEYRGQDI 354          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 2.560e-121
Identity = 194/296 (65.54%), Postives = 213/296 (71.96%), Query Frame = 1
Query:  427 QEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGK-----------------------------SSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*AAGDISGAVRSACRSEAKAIKVQRCQAISK 1227
            QE+LQL+EQDEVQ QHWQHE+VTIFPCPIYFKWKGRVW+YSFQVLSD R                + V A      AP M+ AIFFTDNCAKQFKCRFHFGWLAS  V++RD NG STNVPVH+EHH+FGSCHGK                             S SD +G NTKG T QN INQ+WVVQ PRHL TLLGE+MDFIL EPTE+E M FE + TSSRGGDQLLMTK+WGGESR  ERKT L+TKKPNTLLGR YIF AAGDI  AVRSA RSE+KAIKV+ CQAISK
Sbjct:   34 QEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG-------------QRVGAAC----APTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGGDQLLMTKLWGGESRCKERKTFLVTKKPNTLLGRKYIFQAAGDILPAVRSASRSESKAIKVEGCQAISK 312          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 4.640e-121
Identity = 205/372 (55.11%), Postives = 249/372 (66.94%), Query Frame = 1
Query:    4 KQAAFFGCPRHQGTTDRRF-PASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFETARTSSRGGDQLLMTKVWG------GESRS--DERKTLLI 1092
            +Q  FFGCPR++G  DR   PAST++    P A     G V+WSMF +VD  GRA    R  G      D              PKK V    GTVD+F +E ++I   Y  HRRQ+H QRS FNETL TLEEG VV V DFQEQLQL EQDEVQ+QHWQHESVTIFP PIYFK +GRVW YSFQVL+DDRTQDN WVQ+VM ++L+ HVP L+RK+GA  M  AI FTDNCAKQFKCRFHFGW+A   VM+RD++G +T++ + +EHHYFGSCHGKS+SDSEG  TK   R N +N SWVV++P HL  LL +   F+L E +  EA  F   ++ SRGG QLL+TKV        G+ R   D+R TL++
Sbjct:  430 RQDRFFGCPRNRGGIDRDLGPASTSSSTIHP-AGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANA-GGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCELLAKEFSFLLQEASPDEADRFYEDKSHSRGGQQLLVTKVCDHQLPPTGKDRPIPDDRSTLVV 799          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.880e-33
Identity = 76/108 (70.37%), Postives = 85/108 (78.70%), Query Frame = 1
Query: 1144 GDISGAVRSACRSEAKAIKVQRCQAISKTVATETPGVLFTYTLSCSCELCRNGKTEKCNLFREGIMEASAEWSRRRSHDDEEIPKEREMELMFTRMRSALPYGSVALM 1467
            G I  A+RSA RSE+KAIKV+ CQ ISK VATETPGV+ TYT          G+TEKCNLFREGIMEA AEWSRRRS+DDEE  +ER+MELMFTR R+ LPYGSVALM
Sbjct:   11 GGILPAIRSASRSESKAIKVEGCQVISKIVATETPGVVATYT-----RRPWKGETEKCNLFREGIMEAPAEWSRRRSNDDEETTRERKMELMFTRTRNPLPYGSVALM 113          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: A0A6H5JW27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW27_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.390e-10
Identity = 41/90 (45.56%), Postives = 47/90 (52.22%), Query Frame = 1
Query:    1 RKQAAFFGCPRHQGTTDRRFPASTATLGACPGAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVA 270
            R+QAAFFGCPRH  +TDRR  AS+A LGA     EGQ G+                         P DDDDGDW  +VASD+ R KK  A
Sbjct:   91 RRQAAFFGCPRHHVSTDRRVLASSAALGAMASTSEGQAGK-------------------------PADDDDGDWATKVASDSPRTKKVNA 155          
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Match: V3ZMP6_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZMP6_LOTGI)

HSP 1 Score: 72.4 bits (176), Expect = 8.000e-10
Identity = 56/213 (26.29%), Postives = 91/213 (42.72%), Query Frame = 1
Query:  220 WEPRVASDTSRPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEEGTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKG--RVWSYSFQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSEG 852
            W      +  + + A+   +GTV     + K+       H      Q++ F          ++V+V DF E    + Q+EVQ+ HW    VT+ P   +++     +    +  ++SDD   D     H +   +   V  L+   G     L I F+D C+ Q+K +  F  L+  A        E   +P+ +EHHYFGS HGK+  D EG
Sbjct:  190 WGQTTYGNEGKKRVALLRSSGTVKQLVDQLKEELISLSTHLFIARWQQNVFYTITKNPPTNSIVMVMDFAENYLCVMQNEVQSAHWYQMQVTLHPMLCFYRCDTCEKTVREAINIISDDMQHD----AHAVRCFVETAVCHLINVRGLNPQRL-IKFSDGCSSQYKSKTPFVDLSFAA--------EDLEIPI-VEHHYFGSRHGKNQCDGEG 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17182.5088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G3S2_ECTSI2.010e-29393.58Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K4U5_9PHAE4.760e-18562.42Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KFD4_9PHAE4.700e-16072.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXZ3_ECTSI1.460e-15049.71Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L1G9_9PHAE1.020e-14158.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXK3_9PHAE2.560e-12165.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS2_ECTSI4.640e-12155.11Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JZH6_9PHAE4.880e-3370.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW27_9PHAE1.390e-1045.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
V3ZMP6_LOTGI8.000e-1026.29Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17182contigEcto-sp13_S_contig17182:2..3745 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop1
Start1
Seed ortholog score84.3
Seed ortholog evalue1.2e-13
Seed eggNOG ortholog6669.EFX77257
Model size1504
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2CNQC@1,2QXFF@2759,39Y03@33154,3BMKX@33208,3D3RP@33213,4227P@6656
Cds size1038
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17182.5088.1prot_Ecto-sp13_S_contig17182.5088.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17182 101..2310 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462898.539849-UTR-Ecto-sp13_S_contig17182:1..1001681462898.539849-UTR-Ecto-sp13_S_contig17182:1..100Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17182 2..100 +
1681462898.5854156-UTR-Ecto-sp13_S_contig17182:2310..24531681462898.5854156-UTR-Ecto-sp13_S_contig17182:2310..2453Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17182 2311..2453 +
1681462898.5992486-UTR-Ecto-sp13_S_contig17182:3521..37451681462898.5992486-UTR-Ecto-sp13_S_contig17182:3521..3745Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17182 3522..3745 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462898.5517404-CDS-Ecto-sp13_S_contig17182:100..2621681462898.5517404-CDS-Ecto-sp13_S_contig17182:100..262Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17182 101..262 +
1681462898.5621977-CDS-Ecto-sp13_S_contig17182:1095..18781681462898.5621977-CDS-Ecto-sp13_S_contig17182:1095..1878Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17182 1096..1878 +
1681462898.573021-CDS-Ecto-sp13_S_contig17182:2217..23101681462898.573021-CDS-Ecto-sp13_S_contig17182:2217..2310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17182 2218..2310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17182.5088.1

>prot_Ecto-sp13_S_contig17182.5088.1 ID=prot_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTS
RPKKAVATMTGTVDDFTKEFKDIFRRYIPHRRQYHTQRSAFNETLLTLEE
GTVVIVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYS
FQVLSDDRTQDNAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCA
KQFKCRFHFGWLASRAVMVRDTNGESTNVPVHIEHHYFGSCHGKSSSDSE
GTNTKGVTRQNTINQSWVVQSPRHLSTLLGESMDFILWEPTEKEAMTFET
ARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRTYIF*
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mRNA from alignment at Ecto-sp13_S_contig17182:2..3745+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17182.5088.1 ID=mRNA_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17182:2..3745+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCAAGCAAGCGGCATTCTTCGGTTGTCCCCGTCATCAGGGCACTACCGA TCGACGTTTCCCTGCTTCTACCGCCACCTTGGGCGCGTGCCCTGGCGCCA TGGAAGGCCAGCCAGGAAGGGTGAAGTGGTCCATGTTTACCTCTGTGGAT GCTGAAGGACGCGCAACGGACGCCCGCCGCCTCGCTGGACCGCAGCCACC CGACGACGATGATGGCGACTGGGAACCAAGAGTGGCGTCAGATACATCTA GGCCGAAAAAGGTGAATGCGAGGTTACCGAAACGATCGCAGTGATGTGCT GGGGTCGGCCGCGTATTATAGAGCCCGCTGGTCTCGAAAATCATGACCGG CTATTCCCACTCGTCTACTTTCCTCAGTTTCCTGACTTTCGGCAAGTAGG TGTGGCATGTACAGAGCTACGGCCGCGGATGTAGGCTCCTCGACCGATCA GCGGCCACCACGTGAAACACGTGAAAATGAGATGCTATCAATGCCTTAAA GCTGTCTATTAAGAACTCGATACGTGGTGATCTACATAGCTTTGGTCACG TAGGCCCTCGCCCACGACAAAGATTTCCACCGGCGCGCTACACCTCGTTG TTGTGACTTTCCTAAGATCGACAAGCAGTACAGCGTGGTAGTTGCGGAAT TAGCTGGCATCGAGTCATCGATCGATTTGTGAAGGGATAACTCTGTACTG GACGCAGCGTTGTACGCAATACTGTTTCTCAGCGTTCGGGTGTTTGATAG TATACGCACATCATAACATCCCTTAATGGTGGTTTAGTGCCTCTCGGCTC TGTAGATTGCATTGCTTAGGCTTGAATCAACAAGCTGGAGCTTGAAAACT CTCAGATAGACTATGGACTACAATTGTAAAAGCTCGTCCAACTGTCCCCT ACCTCCTCGCTGATGGCGCACCTCAAGCTAGTCGATAGAGCAGCTGGTAG CGAGAACTTGCGTGCTTGTCGTGGTTCTGAAGGGCTGTCCCTGATCATCG GAAACAGACAAGAGTGGCGTGTACCCATGTCATCTCGGGGTGAATACGAA CAGCACCACGTCGATGTCTATCATTCGGCCATATCCCGTCCCAGGCTGTT GCTACCATGACGGGGACTGTCGACGATTTCACCAAAGAATTTAAGGACAT ATTCCGGCGATACATTCCTCATCGGAGGCAGTATCACACCCAACGAAGCG CGTTCAACGAAACCCTACTTACCCTGGAGGAAGGTACGGTGGTTATCGTC TTCGACTTCCAGGAGCAGCTTCAGCTCATCGAGCAGGACGAAGTACAAGC CCAGCACTGGCAGCACGAAAGTGTAACGATATTCCCCTGTCCCATCTACT TCAAGTGGAAGGGCCGTGTGTGGTCCTACTCTTTCCAAGTTCTCAGCGAC GATAGAACCCAGGACAATGCGTGGGTGCAGCATGTCATGTTCAAGATTCT GACGGAGCATGTCCCAGCGTTGATGCGGAAACTAGGCGCTCCCGCCATGG TGCTAGCGATCTTCTTCACCGATAACTGCGCCAAGCAGTTCAAGTGCAGG TTTCATTTCGGCTGGCTTGCTTCCCGCGCGGTGATGGTTCGTGACACCAA CGGCGAGTCTACCAACGTACCAGTGCACATTGAGCATCACTACTTTGGGA GCTGCCACGGAAAAAGCTCTTCTGATAGCGAAGGGACCAACACCAAAGGC GTAACGAGGCAAAACACCATCAACCAGTCCTGGGTAGTCCAGAGCCCCAG ACACCTCTCTACCCTCCTCGGTGAATCGATGGACTTCATCCTTTGGGAGC CGACCGAAAAGGAAGCGATGACCTTTGAGACTGCCAGGACAAGCAGCAGA GGTGGAGATCAGTTGCTCATGACCAAGGCGAGTATACGACGGTCCTGACA TGGAGGGTGGTGTGGGGTGTGGATCTTTATTTTCATTTTTTCTGCGTTAT GAAAATAATAGATAGTGGTGATTGCCTACGACCTAACCGTCCAGATGAAA TTGCAAGTATGACGGCATACGTACTTTGAGCTGTAGCCGACAATGCAGTT TGGCAGAATCAGGGACGGATGAAACCTCGGACGGAGCTGGCGATCTATAT CCAACCAAAACACTATCGCCTTTCCACGTGGCCACACCGAAAAACATAGG CATGGGGACACCTGCGTGTCAAACTGACCCGACCACCTTCATATCGCCTG ATGATTCTACCGTTAGGTGTGGGGAGGCGAAAGCAGATCCGACGAGAGAA AGACGCTTCTGATCACGAAGAAGCCGAATACGCTCCTAGGCAGAACGTAC ATTTTCTAAGCCGCAGGGGACATTTCGGGAGCAGTTCGTTCAGCTTGTCG CTCCGAAGCGAAGGCGATCAAGGTTCAAAGATGCCAAGCCATCAGCAAAA CCGTCGCCACCGAAACGCCAGGCGTCCTGTTTACCTACACCTTGTCCTGC AGGTAAGTTCATGGTCATTATCTTTGCCAACATACTCTCACTGAAAATAT ACCCGGTTCGTCCGTCGAATAGCACCCGACCTGCGTTACATCCAAGTGTT TGGTAAACAGCATTTTGTAACTTGGCATTTGTTTTTTGGAATTTACGCTG ATCGGTCGAACAGCCACGACCCACTTTCCTGCATGTTGTGCTGGTAAGTT GCGGGAGGGAAACAAGGTCGTCTCTCTTTCGTCAAGTACAGCTACCATTC AAAACTCCGTAGAGATGTTTGGGTTAGCCTGGTGTTCCTGCGAACACTTA CTACATCCAACTGCTGGTCAGTTGCGGGAGGGAAACAAGGTCGTCTCTCT TTCGTCCAGTACAACTATCATTCCATATTCTGTAGAGATGTTCGGAGCTC CTCGGTCAAATAGCGAGTTAGCCTGGTGTTCCTTCGATCACTTATATCCA AGTCCAAGTGTTGAAATTGTTTGGTGAATAGTAACTTGTGACTTGGCACT TTTTTTTTTGTCTTTGGTATTTACGCTCTTCGGTCGAACAGCCGCCACCA AAATTCCTGCATGTTGTGCTGGTAAGTTGCGCGACGAAAACAACGCCGTC TCTCTTTCGTCCAGTACAACTATCCCCCAATATTCTATACATGTATTTGG AGCTCGTCGGTCGAAGAGCAGGGAGTTAGCTTGGTGTTCCTGCGTTCACT TACATCTCAAATGTTTGGAACAAATTGGCACTTTGGCTTCAAATTGGCAT TTTGGGTTTAGTATTTACGCTGATCGGTCAAAACAATATATACCAATTTC TTGGATGATGTTCGGCTGGTAAGTTTCACCGACGGAACCAGGGTAACTAC TACTTTTGTGCAATACTCACCATTACTCAGTACGCATATTATCTGTGTAT TTGGAGCTGGTCGGTCGAAATGTAGCGAGCTACAGTAGGGTGGTGTTCCT GCGGTCACTCCGCATCGTATTTGGTATCTGATCGGTCGAGTAGCCGCGTC AGAATCGTCCATTCCAGAGGTAATTGTTGTCCCTGGTTCGATTGTTAACC CCTGCACTGATTTCCCACAGTTGTGAGCTCTGCAGAAATGGAAAAACGGA GAAGTGTAATTTGTTCCGTGAAGGCATCATGGAGGCATCTGCAGAGTGGT CCCGGCGACGAAGCCACGACGACGAGGAGATCCCAAAGGAGAGGGAGATG GAACTCATGTTCACTCGAATGAGGAGCGCACTACCATATGGATCAGTCGC TTTGATGCGTGTTCACCCAGAAGAGTACCAAGGCCAGGATGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17182:2..3745+

>mRNA_Ecto-sp13_S_contig17182.5088.1 ID=mRNA_Ecto-sp13_S_contig17182.5088.1|Name=mRNA_Ecto-sp13_S_contig17182.5088.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1038bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17182:2..3745+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGGCCAGCCAGGAAGGGTGAAGTGGTCCATGTTTACCTCTGTGGA
TGCTGAAGGACGCGCAACGGACGCCCGCCGCCTCGCTGGACCGCAGCCAC
CCGACGACGATGATGGCGACTGGGAACCAAGAGTGGCGTCAGATACATCT
AGGCCGAAAAAGGCTGTTGCTACCATGACGGGGACTGTCGACGATTTCAC
CAAAGAATTTAAGGACATATTCCGGCGATACATTCCTCATCGGAGGCAGT
ATCACACCCAACGAAGCGCGTTCAACGAAACCCTACTTACCCTGGAGGAA
GGTACGGTGGTTATCGTCTTCGACTTCCAGGAGCAGCTTCAGCTCATCGA
GCAGGACGAAGTACAAGCCCAGCACTGGCAGCACGAAAGTGTAACGATAT
TCCCCTGTCCCATCTACTTCAAGTGGAAGGGCCGTGTGTGGTCCTACTCT
TTCCAAGTTCTCAGCGACGATAGAACCCAGGACAATGCGTGGGTGCAGCA
TGTCATGTTCAAGATTCTGACGGAGCATGTCCCAGCGTTGATGCGGAAAC
TAGGCGCTCCCGCCATGGTGCTAGCGATCTTCTTCACCGATAACTGCGCC
AAGCAGTTCAAGTGCAGGTTTCATTTCGGCTGGCTTGCTTCCCGCGCGGT
GATGGTTCGTGACACCAACGGCGAGTCTACCAACGTACCAGTGCACATTG
AGCATCACTACTTTGGGAGCTGCCACGGAAAAAGCTCTTCTGATAGCGAA
GGGACCAACACCAAAGGCGTAACGAGGCAAAACACCATCAACCAGTCCTG
GGTAGTCCAGAGCCCCAGACACCTCTCTACCCTCCTCGGTGAATCGATGG
ACTTCATCCTTTGGGAGCCGACCGAAAAGGAAGCGATGACCTTTGAGACT
GCCAGGACAAGCAGCAGAGGTGGAGATCAGTTGCTCATGACCAAGGTGTG
GGGAGGCGAAAGCAGATCCGACGAGAGAAAGACGCTTCTGATCACGAAGA
AGCCGAATACGCTCCTAGGCAGAACGTACATTTTCTAA
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