mRNA_Ecto-sp13_S_contig1718.5085.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.710e-38 Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1
Query: 25 NSQQVISVWHDIPLYVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
+SQQVISVWHDIPLYVRDE EKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK
Sbjct: 49 HSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 114
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.100e-26 Identity = 52/67 (77.61%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 25 NSQQVISVWHDIPLYVRDE-TEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
+ +VIS WHDIPLYV DE + K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKK
Sbjct: 31 HDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKK 97
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.600e-23 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 22 TNSQQVISVWHDIPLYVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
+ ++V+S+WHD+PLY DE TG LNFVCEIPRCSRKK+EIAT+E GNPIKQD KKG LR FKK
Sbjct: 88 SEEKRVLSLWHDLPLYCTDEYGLRTGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKK 154
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S3UN01_HETAK (Inorganic diphosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UN01_HETAK) HSP 1 Score: 91.3 bits (225), Expect = 2.530e-21 Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 25 NSQQVISVWHDIPLY-VRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
N +++ S+WHD+PLY ET K TG L F+CEIPR +RKK+EIAT+E GNPIKQD K G LREF K
Sbjct: 2 NKKKIFSLWHDLPLYCTHPETNKPTGKLKFICEIPRTTRKKYEIATDEPGNPIKQDQKNGKLREFMK 68
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A1Z5KHH2_FISSO (Inorganic diphosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHH2_FISSO) HSP 1 Score: 92.8 bits (229), Expect = 6.080e-21 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 1 RLPARAPTNSQQVISVWHDIPLYVRDETEKC-TGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
RL A P ++ IS+WHDI LY D K T +LNFVCEIP+ +RKKFEIAT+E GNPIKQDTKKG LREFKK
Sbjct: 44 RLQAVCPEKKKK-ISLWHDISLYHMDPVTKAETPYLNFVCEIPKFTRKKFEIATDEEGNPIKQDTKKGQLREFKK 117
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.450e-21 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 28 SQQVISVWHDIPLYVRDE-TEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
S + IS WHD+ L+ R+E + TG LNFVCEIP+ SRKKFE+ATNE NPIKQDTKKG+LREFKK
Sbjct: 167 SNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKK 232
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S4JNG1_9STRA (Inorganic diphosphatase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JNG1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.650e-20 Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 22 TNSQQVISVWHDIPL-YVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
T ++ IS+WHDI L ++ T++ T +LNFVCEIP+ SRKK+EIAT+EVGNPIKQD KKG LREFKK
Sbjct: 52 TKGKKEISLWHDITLVHIDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGKLREFKK 119
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S1Y8S7_9STRA (Inorganic diphosphatase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y8S7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.480e-20 Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 22 TNSQQVISVWHDIPL-YVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
+N + IS+WHD+ L ++ ET + T +LNFVCEIP+ +RKK+EIAT+EVGNPIKQDTKKG LREFKK
Sbjct: 54 SNCGKTISLWHDVSLAHLDTETGEPTTNLNFVCEIPKFTRKKYEIATDEVGNPIKQDTKKGKLREFKK 121
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S2EA91_TRICV (Inorganic diphosphatase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EA91_TRICV) HSP 1 Score: 88.6 bits (218), Expect = 3.920e-20 Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 40 ISVWHDIPL-YVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
IS+WHD+ L ++ T++ T +LNFVCEIP+ SRKK+EIAT+EVGNPIKQD KKG LREFKK
Sbjct: 77 ISLWHDVTLVHIDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGKLREFKK 138
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Match: A0A7S0AEZ5_9STRA (Inorganic diphosphatase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEZ5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.970e-20 Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 1
Query: 40 ISVWHDIPL-YVRDETEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKK 222
IS+WHD+ L ++ T++ T +LNFVCEIP+ SRKK+EIAT+EVGNPIKQD KKG LREFKK
Sbjct: 28 ISLWHDVTLVHIDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGKLREFKK 89 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1718.5085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1718.5085.1 >prot_Ecto-sp13_S_contig1718.5085.1 ID=prot_Ecto-sp13_S_contig1718.5085.1|Name=mRNA_Ecto-sp13_S_contig1718.5085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp RLPARAPTNSQQVISVWHDIPLYVRDETEKCTGHLNFVCEIPRCSRKKFEback to top mRNA from alignment at Ecto-sp13_S_contig1718:15615..15836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1718.5085.1 ID=mRNA_Ecto-sp13_S_contig1718.5085.1|Name=mRNA_Ecto-sp13_S_contig1718.5085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1718:15615..15836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1718:15615..15836+ >mRNA_Ecto-sp13_S_contig1718.5085.1 ID=mRNA_Ecto-sp13_S_contig1718.5085.1|Name=mRNA_Ecto-sp13_S_contig1718.5085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1718:15615..15836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |