mRNA_Ecto-sp13_S_contig17170.5082.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: D7FLK6_ECTSI (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK6_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 2.890e-173 Identity = 234/238 (98.32%), Postives = 237/238 (99.58%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
++AQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLG GNGGSVML+RAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG
Sbjct: 92 KRAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGRGNGGSVMLARAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 329
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE) HSP 1 Score: 497 bits (1279), Expect = 8.300e-168 Identity = 233/238 (97.90%), Postives = 237/238 (99.58%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
++AQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYL+SQGVHGVKVDAQSVVNFLG GNGGSVML+RAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG
Sbjct: 437 KKAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLKSQGVHGVKVDAQSVVNFLGRGNGGSVMLARAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 674
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA) HSP 1 Score: 369 bits (948), Expect = 3.740e-117 Identity = 173/256 (67.58%), Postives = 202/256 (78.91%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEG--GRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQ----------------DWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
++A+ E I YFLVWHAIAGYWAGVD+D+PDL K++P+RA L P IV VDPDMKMFFRV KFLNKRFGVVPPE IR+FYD+YHRYLR GV GVKVDAQS++NF+G NGGSV +SRA+H ALSKSV ++F D D +G G GRIIHCMCHD+EILL LP+CY R+P+IRGSDDFYPRD+ SH H+Y+NAFN+L+I CGLQ DWDMFQT +G SWMHAASRA+SGGPVYISDRPG
Sbjct: 525 QKAKTEHDIKYFLVWHAIAGYWAGVDMDAPDLFKFRPQRARLTAPLDIVAVDPDMKMFFRVCKFLNKRFGVVPPEHIRAFYDEYHRYLRENGVDGVKVDAQSLLNFVGYNNGGSVEMSRAYHYALSKSVTRHFPDGDTARGSGRGGRIIHCMCHDNEILLTLPSCYARRPLIRGSDDFYPRDEASHGSHLYSNAFNALLIGHCGLQAKALDGFTHHALAGLRDWDMFQTTLGPVSWMHAASRAISGGPVYISDRPG 780
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A7S3Y1T0_HETAK (Galactinol--sucrose galactosyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1T0_HETAK) HSP 1 Score: 275 bits (702), Expect = 5.590e-85 Identity = 131/250 (52.40%), Postives = 169/250 (67.60%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGG------------RIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
R+ + +FG+ FLVWHA+AGYWAGV+ +P L KY L + P +++VD D+ +NK+ G+V P+ +FY+DYHRYL QGV G+KVDAQS+VN +G G GGSV ++ A+H AL +S K+FS E EG +IHCMCHDSEILL L Y +P++RGSDD YPRD SH PH+Y NAFN+L++S GLQDWDMFQT +G SW+H A+RAVSGGPVY+SDRPG
Sbjct: 108 REVKRDFGVKEFLVWHALAGYWAGVER-TPALEKYAIVDTLPHSPEKLMQVDRDLWKLTLYLNLMNKKQGMVHPDHAGAFYEDYHRYLAEQGVDGIKVDAQSIVNVMGNGLGGSVKVAAAYHKALQRSSMKHFSGRRKEGVEGXXXXXXXXQPRAPNLIHCMCHDSEILLLLAGLYEHRPLVRGSDDHYPRDPASHGPHLYFNAFNALLVSFVGLQDWDMFQTALGPGSWLHGAARAVSGGPVYVSDRPG 356
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A836CJ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ91_9STRA) HSP 1 Score: 266 bits (680), Expect = 3.190e-83 Identity = 134/252 (53.17%), Postives = 171/252 (67.86%), Query Frame = 1
Query: 7 AQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKR--FGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACY-------------GRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCG-LQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
A+ ++G++ FLVWHA+ GYW GVD+D P+L YK + L P GI E + R S ++ +R FG+VPPE I +FY +YH YLR+ GV GVKVDAQS+++ LG G GG+V L+RA AL+ SVR +F G +IHCMCHDS +LLQLP Y G +P++RGSDDFYPRD SH HIYANAFN+L+++ CG LQDWDMFQT++G MHAA+RA+SGGPVYISDRPG
Sbjct: 21 AKTKYGVENFLVWHAVQGYWQGVDVDRPELASYKAQWRRLVVPEGISERVGSTVL--RRSAYMQRRYGFGLVPPETISAFYQEYHGYLRAHGVDGVKVDAQSILSCLGEGQGGTVALTRASQAALAASVRAHFG--------GPAVIHCMCHDSAMLLQLPVHYPDGRGGXXXXXXSGVRPIVRGSDDFYPRDPASHGTHIYANAFNALLLAYCGALQDWDMFQTSLGAVGAMHAAARAISGGPVYISDRPG 262
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: D8LQ35_ECTSI (Galactinol--sucrose galactosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ35_ECTSI) HSP 1 Score: 243 bits (620), Expect = 4.030e-71 Identity = 117/252 (46.43%), Postives = 163/252 (64.68%), Query Frame = 1
Query: 10 QEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIG-----------------DASWMHAASRAVSGGPVYISDRPG 714
+ +FG++ L WHA+AGYWAGV+ ++ ++V + P A L P GI EVDP+M+ + +KRFG+V + +FY YH YLR GV GVKVDAQS+++ +G GNGG +++A+H L +SV+ F E G +IHCMCH +L + + VIRGSDDFYPR+ SH PH+Y+N+FN+L++S+ G+QDWDMFQT +G +ASW HAA+RA+SGGPVY+SDRPG
Sbjct: 321 KRDFGVERVLAWHAMAGYWAGVEPEASEMVPFDPLVAKLLAPEGIQEVDPEMQ-----PELDHKRFGMVRLGNVEAFYRAYHGYLRDNGVDGVKVDAQSILDCMGGGNGGVPAVTKAYHEGLVQSVQATFK----EGGRPAALIHCMCHAPSVLFHIACVSEDRAVIRGSDDFYPREDLSHGPHLYSNSFNALLLSNLGVQDWDMFQTGLGVQGTGDAAGAAGLSEGANASWFHAAARAISGGPVYVSDRPG 563
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A2I0X2S9_9ASPA (Galactinol--sucrose galactosyltransferase n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X2S9_9ASPA) HSP 1 Score: 191 bits (486), Expect = 1.100e-52 Identity = 97/236 (41.10%), Postives = 140/236 (59.32%), Query Frame = 1
Query: 7 AQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
A+E++G+ + VWHAI GYW GV S ++ +++ N PG+ E +P MK + L G++ P+ + FY++ H YL + G+ GVKVD QS++ LG G+GG V L+R +H AL SV K F D+ I CMCH ++ L C + V+R SDDFYPRD SH+ HI + AFN++ + + DWDMF + + A HA++RA+SGGPVY+SD PG
Sbjct: 334 AKEKYGLKFVYVWHAITGYWGGVQPGSEEMAEFESTIQYPNISPGVAENEPWMKTDILTLQGL----GLINPKSVHKFYNELHSYLATVGIDGVKVDVQSILETLGTGHGGRVQLARQYHDALDASVAKNFPDNG--------CIACMCHHTDALY----CAKQTAVVRASDDFYPRDSMSHTIHIASVAFNNVFLGEFMVPDWDMFHS-LHPAGEYHASARAISGGPVYVSDAPG 552
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A0D9WMF1_9ORYZ (Galactinol--sucrose galactosyltransferase n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WMF1_9ORYZ) HSP 1 Score: 192 bits (487), Expect = 1.340e-52 Identity = 101/238 (42.44%), Postives = 140/238 (58.82%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
+ A++++G+ Y VWHAI GYW GV + +Y+ N PG+VE +P+MK ++ L G+V P + FYD+ H YL + GV GVKVD Q V+ LG G+GG V L+R FH AL S+ K F D+ II CM H+++ L C + V+R SDDFYPRD SH+ HI + A+NS+ + L DWDMF + + A H ++RA+SGGPVY+SD PG
Sbjct: 378 KTAKKKYGLKYVFVWHAITGYWGGVRPGVAGMEEYESTMKFPNVSPGVVENEPNMKTDVLTTQGL----GLVHPRAVYRFYDELHAYLAAAGVDGVKVDVQCVLETLGAGHGGRVSLTRQFHQALDASIAKNFPDNG--------IIACMSHNTDALY----CAKQTAVVRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMLPDWDMFHS-LHPAGDYHGSARAISGGPVYVSDAPG 598
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: J3MBQ0_ORYBR (Galactinol--sucrose galactosyltransferase n=2 Tax=Oryza TaxID=4527 RepID=J3MBQ0_ORYBR) HSP 1 Score: 191 bits (484), Expect = 2.930e-52 Identity = 103/238 (43.28%), Postives = 136/238 (57.14%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
R A+E++G+ Y VWHAI GYW GV + Y N PG+VE +P MK ++ L G+V P + FYD+ H YL + GV GVKVD Q V+ LG G+GG V L+R FH AL S+ K F ++ II CM H ++ L C + V+R SDDFYPRD SH+ HI A A+NS+ + L DWDMF + + A H ++RA+SGGPVY+SD PG
Sbjct: 389 RAAKEKYGLKYVYVWHAITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVLTTQGL----GLVHPRAVYRFYDELHAYLAAAGVDGVKVDVQCVLETLGAGHGGRVSLTRQFHQALDASIAKNFPENG--------IIACMSHHTDALY----CAKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMLPDWDMFHS-LHPAGDYHGSARAISGGPVYVSDAPG 609
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Match: A0A194YHH7_SORBI (Galactinol--sucrose galactosyltransferase n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A194YHH7_SORBI) HSP 1 Score: 190 bits (483), Expect = 3.730e-52 Identity = 100/238 (42.02%), Postives = 136/238 (57.14%), Query Frame = 1
Query: 1 RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEVDPDMKMFFRVSKFLNKRFGVVPPEKIRSFYDDYHRYLRSQGVHGVKVDAQSVVNFLGPGNGGSVMLSRAFHTALSKSVRKYFSDSDGEKGEGGRIIHCMCHDSEILLQLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPG 714
R A+EE+G+ Y VWHAI GYW GV P Y+ PG++E +P MK + L G+V P + FYD+ H YL + GV GVKVD Q ++ LG G+GG V L+R +H AL S+ K F ++ II CM H+++ L C + V+R SDDFYPRD SH+ HI + A+NS+ + L DWDMF + + A H ++RA+SGGPVY+SD PG
Sbjct: 382 RAAKEEYGLKYVYVWHAITGYWGGVRPGEPGTEHYRSSMQFPKVSPGVMENEPGMKTDVLTVQGL----GLVHPRAVYRFYDELHAYLAAAGVDGVKVDVQCILETLGAGHGGRVQLTRQYHQALDASIAKNFPENG--------IIACMSHNTDALY----CSKQTAVVRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMLPDWDMFHS-LHQAGDYHGSARAISGGPVYVSDAPG 602 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17170.5082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17170.5082.1 >prot_Ecto-sp13_S_contig17170.5082.1 ID=prot_Ecto-sp13_S_contig17170.5082.1|Name=mRNA_Ecto-sp13_S_contig17170.5082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp RQAQEEFGIDYFLVWHAIAGYWAGVDLDSPDLVKYKPRRALLNRPPGIVEback to top mRNA from alignment at Ecto-sp13_S_contig17170:416..3650+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17170.5082.1 ID=mRNA_Ecto-sp13_S_contig17170.5082.1|Name=mRNA_Ecto-sp13_S_contig17170.5082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3235bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17170:416..3650+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17170:416..3650+ >mRNA_Ecto-sp13_S_contig17170.5082.1 ID=mRNA_Ecto-sp13_S_contig17170.5082.1|Name=mRNA_Ecto-sp13_S_contig17170.5082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17170:416..3650+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |