mRNA_Ecto-sp13_S_contig17150.5075.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.990e-36 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 MASPPAAQRCTPSRYDTDVHTAAFDDDDELMDTLLSNGSSADIDRRRNPQGWTPLMVAAGEGHSKVVGILLNKGADMSVVNDLGSXXXXXXXXXXXXXXXXXXXXXXXNLEAGELNGGW 357
MASPPAAQRC P Y+TD+H AAFD+DDELMDTLLS+GS ADIDRR NP+GWTPLMV AGEGHS+VVGILLNKGAD+SVVNDLGSXXXXXXXXXXXXXXXXXXXXXXX LEA +L GW
Sbjct: 26 MASPPAAQRCIPGGYNTDLHAAAFDNDDELMDTLLSSGS-ADIDRRGNPRGWTPLMVTAGEGHSQVVGILLNKGADLSVVNDLGSXXXXXXXXXXXXXXXXXXXXXXXXLEAADLTAGW 143
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.860e-31 Identity = 99/135 (73.33%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 1 MASPPAAQRCTPSRYDTDVHTAAFDDDDELMDTLLSNGSSADIDRRRNPQGWTPLMVAAGEGHSKVVGILLNKGADMSVVNDLGSXXXXXXXXXXXXXXXXXXXXXXXNLEAGELNGGWNRS*WLPTRATRKFLG 405
MASPPAAQ CTP Y+T +H AA D+DDELM TLLS+GS ADIDRR NP GWTPLMVAAGEGHS+VVGILLNKGAD+SVVND XXXXXXXXXXXXXXXXXXXXXXX LEA EL GW + K LG
Sbjct: 1 MASPPAAQPCTPGGYNTGLHAAALDNDDELMHTLLSSGS-ADIDRRGNPLGWTPLMVAAGEGHSQVVGILLNKGADLSVVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAAELTLGWTPVMMAAYQGHSKVLG 134
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 3.650e-8 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 2
Query: 797 VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSEA**KPLAAATGETHGLG 1024
VR+L+Q+LGI+GCD SAGA+ + +A + DI+ +L +AGV+DTG+ L A G EA K L + G G
Sbjct: 294 VRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCG 369
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 3.160e-7 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 2
Query: 716 ECEPFATCR-DGYSCRWMP---R*SQSTQR*VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSEA 976
+ +P TC D R++P + V +L++Q+GI GC G+S G N +R A + DI+ +L DAGV+DTG L+ A +G EA
Sbjct: 171 KADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEA 261
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: UPI001EE52C1C (probable palmitoyltransferase AKR2 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE52C1C) HSP 1 Score: 59.7 bits (143), Expect = 8.610e-7 Identity = 31/66 (46.97%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 55 VHTAAFDDDDELMDTLLSNGSSADIDRRRNPQGWTPLMVAAGEGHSKVVGILLNKGADMSVVNDLG 252
+H A D++++++ +LS G ADID R N QG TP M AA +G+ KVV +L++KG ++SVV++LG
Sbjct: 100 LHVACLGDNEDIVEDVLSRGI-ADIDSRDN-QGRTPAMYAAAKGYKKVVDLLVSKGCNLSVVDNLG 163
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.100e-6 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query: 797 VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSEA 976
V++LVQQ+ I+GC GAS G + +R A ++ D++ +LAD GV+DTG LI A EA
Sbjct: 203 VQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEA 262
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 1.280e-6 Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 2
Query: 797 VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSE 973
VR+L+QQLG++GC G SAG ++R A + DI+ +L GV+DTGR L+ A ++ E
Sbjct: 196 VRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSRE 254
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 2.950e-6 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 2
Query: 797 VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSEA**KPLAAATGE 1009
R+LVQ+ GI+GC GASAG + + A + D++ +L DAGV+DTG L+ G E K L GE
Sbjct: 197 ARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGE 267
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.820e-6 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query: 797 VRKLVQQLGIQGCDGASAGANTIRWAIQTEQHDIVVMLADAGVIDTGRVLIDATKFGSEA 976
VR+L++Q+ I+GC GAS G +R A ++ D++ +LADAGV+DTG LI A EA
Sbjct: 203 VRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEA 262
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Match: UPI001EE4FC66 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X2 n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4FC66) HSP 1 Score: 58.5 bits (140), Expect = 5.370e-6 Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 55 VHTAAFDDDDELMDTLLSNGSSADIDRRRNPQGWTPLMVAAGEGHSKVVGILLNKGADMSVVNDLG 252
+H A D+ +L++ LLS G ADI+ + + G TP+M AA +GH KVV +L++KG ++SVV+DLG
Sbjct: 98 LHAACLSDNVDLVEDLLSRGI-ADIESK-DKNGATPVMYAAEQGHKKVVDLLVSKGCNLSVVDDLG 161 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17150.5075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17150.5075.1 >prot_Ecto-sp13_S_contig17150.5075.1 ID=prot_Ecto-sp13_S_contig17150.5075.1|Name=mRNA_Ecto-sp13_S_contig17150.5075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp MASPPAAQRCTPSRYDTDVHTAAFDDDDELMDTLLSNGSSADIDRRRNPQback to top mRNA from alignment at Ecto-sp13_S_contig17150:2..1152- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17150.5075.1 ID=mRNA_Ecto-sp13_S_contig17150.5075.1|Name=mRNA_Ecto-sp13_S_contig17150.5075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1151bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17150:2..1152- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17150:2..1152- >mRNA_Ecto-sp13_S_contig17150.5075.1 ID=mRNA_Ecto-sp13_S_contig17150.5075.1|Name=mRNA_Ecto-sp13_S_contig17150.5075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17150:2..1152- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |