mRNA_Ecto-sp13_S_contig1714.5066.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 747 bits (1928), Expect = 3.480e-264 Identity = 448/627 (71.45%), Postives = 465/627 (74.16%), Query Frame = 1
Query: 1 VPSTRSSSSSSAPPCSSSRAAPYSGRDQFHVQPANSSVSSKSPARHALNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSAPQPSIFNSSASQPGGPVIPVLSVSPSSSAYTAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSG---RVGET-SVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGKRSQGPAAXXXXXXXX-VGSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGTG*GKESSVERGQKPSNQARSTPVAES 1863
VPSTRSSSSS CSSSR PYSG+DQ Q ANSSVSS+SPA H LNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSA QPS GGP + VLS SPSS A+TAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTT+RHGALFRATREGNAFR+LAAATVKSPPP I KG + + R+ T S G SSSSSHPK +TS TRGQVLKR ANR G+SGGHNGGSQSS NRTCLFPGCDARPDYGLPGATRA+YCFAHKK PMVQLFKE PALPNKAG+ATTGKRSQGPAAXXXXXXXX VG+ KTRAPSN DRNGAK+ARRGPQE RLADSSGMAPSVEFLVLRQARE AKTEAEASGLGRRPRAPSRRALEAAGRLKG GAQWMSR KKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVP ATGTEAAGDGIE+RD E RGE GATTPR S GW KVSPEALSAPSSKQHG+G GK SSV R QKPS QARST VAES
Sbjct: 28 VPSTRSSSSSPTSSCSSSRVTPYSGQDQLDAQLANSSVSSESPALHDLNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSASQPSXXXXXXXXXGGPGVRVLSTSPSSPAHTAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKR--------------------------ANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGNATTGKRSQGPAAXXXXXXXXSVGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQHGSGQGKGSSVGRRQKPSKQARSTAVAES 628
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 680 bits (1755), Expect = 5.910e-238 Identity = 417/635 (65.67%), Postives = 438/635 (68.98%), Query Frame = 1
Query: 4 PSTRSSSSSSAPPCSSSRAAPYSGRDQFHVQPANSSVSSKSPARHALNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSAPQPSIFNSSASQPGGPVIPVLSVSPSSSAYTAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSG---RVGET-SVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGK-RSQGPAAXXXXXXXXV----------GSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGTG*GKESSVERGQKPSNQARSTPVAES 1863
PSTRS+S SSA CS SRAAPYSG+DQF QPANSSVSS PA HA+N PGQAAA G KEG GPYPLRPRPTHGAVVKQALS+ KSSA S PG +PVLS SPSSSA+T+VPPAKE PIP+ CQHRGCSNLARYGPLDSPP CQLHKRVGQFTT+RHGALFRATREGNAFR+LAAAT KSPPP I KG + + R+ T S G SSSSHPK KTS TRGQVLKR ANRPG+SGG+N SQSS + CLFPGCDARPDYGLPGATRAVYCF+HKKGPMVQLFKE PALP+ AG ATTGK RSQ P XXXXXX G+KK RAP N DRNGAK ARRG QE RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSR KKAEDLRLKAELRLQRK+YQAAGLKSGVVLEMFVP ATGTEAAGDGIEERD E RGE GATTP S GWQKVSPE LSA S KQH TG +ESSV GQKPS Q R T VAES
Sbjct: 29 PSTRSASLSSASSCSCSRAAPYSGQDQFDAQPANSSVSSNGPALHAINAPGQAAATGAKEGPGPYPLRPRPTHGAVVKQALSVLKSSA----------SHPGRAGMPVLSASPSSSAHTSVPPAKELPIPVRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKR--------------------------ANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRPTTVAES 627
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 3.360e-140 Identity = 263/442 (59.50%), Postives = 271/442 (61.31%), Query Frame = 1
Query: 541 AFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGK-RSQGPAAXXXXXXXXVGSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGTG*GKESSVERGQKPSNQARSTPVAES 1863
AFRELAAATVKSPPP I KG ANRPG+SGGHNGGSQSS NR+CLFPGCDARPDYGLPGATRAVYCF+HKKGPMVQLFKE PALP+ G ATTGK RSQ P VG+K RAPSN DRN AK+ARRG QE RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSR KKAEDLRLKAELR QRKQYQAAGLKSGVVLEMFVP ATGTEAAGDGIEERD E RGE GATT R S GWQKVSPE LSAPSSKQHGTG +E+SV RGQKPS QARST VAES
Sbjct: 11 AFRELAAATVKSPPPCSINKG--------------------------------------------------------------ANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKPRSQAPTEPAAAAAS-VGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETSVGRGQKPSKQARSTAVAES 389
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 405 bits (1041), Expect = 1.200e-133 Identity = 272/502 (54.18%), Postives = 282/502 (56.18%), Query Frame = 1
Query: 394 MHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDA------------TTGKRSQGPAAXXXXXXXXVGSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGTG*GKESSVERGQKPSNQARSTPVAES 1863
M CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPP I KG S G SSSSSHP +TSATRG C+ARPDYGLPGATRAVYCF+HKKGPMVQLFKEPP+LPNKAG A TTGKRSQGPA XXXXXXX VG+KKTRAPS+ DRNG+K+ARRG QE RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSR KKAEDLR+KAELR QRKQYQ KVSPEALSAP SKQHGTG KE+SV RGQKPS QARST VAES
Sbjct: 1 MRCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPCSIFKG----------SSGRSSSSSHPMPGRTSATRG---------------------------------------------------------CEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKENLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQ---------------------------------------------------KVSPEALSAPYSKQHGTGQRKETSVGRGQKPSKQARSTAVAES 384
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.010e-64 Identity = 173/464 (37.28%), Postives = 217/464 (46.77%), Query Frame = 1
Query: 289 SSASQPGGPVIPVLSVSPSSSAYTAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCA----NRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGKRSQGPAAXXXXXXXXVGSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAD---------------SSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFV 1623
SS+ PG V P S+SP ++ T+ P + P C++ GC A+YG D+PP CQ HKR GQ+TT+RHG L ATR+G+AFR A A P P S + GT ++S+ P+ R T +T V K LS +V A +RPG S + S++ +CLFP C ARP YGLPGA RA YCF+HKKG MV LF E PA+ N T P ++ D+ GAK+ARR ++ + S GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+R KKAE R+ +ELR +RK+ + AGLK GVVLE FV
Sbjct: 27 SSSLSPG--VSPASSMSPPPTS-TSSPKTLQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAV---PVPAVTVPPSPASSEI----AGTEAASAQPRRRSTGSTGSSVPSHRKPKAK--------------LSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVT---PAAPTEGKRKKQKKGHEERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 232 bits (591), Expect = 4.770e-64 Identity = 166/438 (37.90%), Postives = 207/438 (47.26%), Query Frame = 1
Query: 385 PIPM--HCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGKRSQGPAAXXXXXXXXVGSKKTRAPSNTDRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAD---------------SSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEA 1647
P+P C++ GC A+YG ++PP CQ HKR GQ+TT+RHG L ATR+G+AFR A A P P S + GT ++S+ P+ R T ++ V K + S V+ + NRPG S + S + NR+CLFPGC ARP +GLPGA RAVYCF+HKKG MV LF E A+ N + T S P ++ D+ GAK+ARR + S GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+R KKAE R+ +ELR +RK+ + AGLK GVVLE FVP A A
Sbjct: 108 PVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAV---PVPAVTVPPSPASSEI----AGTEAASARPRRRSTGSSGSSVPSHRKPKEN------LSSSVHTLKR----KNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVT---SAAPTEGKKKKQTQAKKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDGGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSDGMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRAPSRRA 525
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 216 bits (549), Expect = 1.140e-59 Identity = 180/458 (39.30%), Postives = 222/458 (48.47%), Query Frame = 1
Query: 289 SSASQPGGPVIPVLSVSPSSSAYTAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPVLSCTVCANRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNK------AGDATTGKRSQGPAAXXXXXXXXV-----GSKKTRAPSNT--DRNGAKRARRGPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFV 1623
SS+ PG V P S+SP ++ T+ P P C++ GC A+YG D+PP CQ HKR GQ+TT+RHG L ATR+G+AFR A A P + + G ++S+ P+ R T ++ V K AK S L NRP S + S + NR+CLFPGCDARP YGLPGA RAVYCF+HKKG MV LF + PA+ N A T GKR + XXXXXXX + G+KK R S+ D GA G + S GM+PSVE L+LRQARE AK EAEASG GRR RAPSRRALEA+GRL+G GAQWM+R K+AE R+ ELR +RK+ + AGL GVVLE FV
Sbjct: 27 SSSLSPG--VSPTSSLSPPPTS-TSSPKTLLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAV----PVLAVT---VPPSPASSEIAGMEAASAQPRRRSTGSSGSLVPSHRKPK-------AKLSSSVHTLKRK---NRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAPTEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTN-RPSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.280e-42 Identity = 147/388 (37.89%), Postives = 173/388 (44.59%), Query Frame = 1
Query: 523 ATREGNAFRELAAATVKSPPPYCIKKGKIKSGRVGETSVGTSSSSSHPKLRKTSATRGQVLKREMTKVDGGEGRAKGSVVYPV--LSCTVCA----NRPGMSGGHNGGSQSSGNRTCLFPGCDARPDYGLPGATRAVYCFAHKKGPMVQLFKEPPALPNKAGDATTGKRSQGPAAXXXXXXXXVGSKKTRAPSNTDRNGAKRARRGP---QEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAD------------SSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFV 1623
ATR+G+AFR A A P P S + GT ++S+ P+ R T G G + S P LS +V NRPG S + S + NR CLFPGC ARP YGLPGA AVYCF+HKKG MV LF PA+ N T P XXXX + D+ GAK+ARR ++ AD S GMAPSVE L+LRQARE AKTEAEASG GRR RAPSRRALEA+G+LKG GAQWM+R KKAE R+ ELR +RK+ + AGLK GVVLE FV
Sbjct: 2 ATRDGDAFRTPAVAV---PVPAVTVPLSPASSEI----AGTEAASAQPRRRST----------------GSSGPSVPSQCKPKAKLSSSVHTLKRKNRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVT---PAAPTEGKRKXXXXXXXXRKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 154 bits (388), Expect = 2.820e-38 Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1336 RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGT 1785
R D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+R +KAE+ R+KAELR QR+QY+AAG KSGVVLE FV A GT GDG+ G ATT WQKVSPE L+A + ++ T
Sbjct: 122 RSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQAT 271
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 154 bits (390), Expect = 4.590e-38 Identity = 92/150 (61.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1336 RLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSRGKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPTATGTEAAGDGIEERDVEGRGEWGATTPRRSILGWQKVSPEALSAPSSKQHGT 1785
R D++GMAPSVEF +LRQARE AK EA ASG GRRPRAPSRRALEA+G+LK GAQWM+R +KAE+ R KAELR QR+QY+AAGLKSGVVLE FV A GT AGDG+ G ATT WQKVSP L+A ++ T
Sbjct: 172 RSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQAT 321 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1714.5066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1714.5066.1 >prot_Ecto-sp13_S_contig1714.5066.1 ID=prot_Ecto-sp13_S_contig1714.5066.1|Name=mRNA_Ecto-sp13_S_contig1714.5066.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=466bp MHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAback to top mRNA from alignment at Ecto-sp13_S_contig1714:1..5092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1714.5066.1 ID=mRNA_Ecto-sp13_S_contig1714.5066.1|Name=mRNA_Ecto-sp13_S_contig1714.5066.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1714:1..5092+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1714:1..5092+ >mRNA_Ecto-sp13_S_contig1714.5066.1 ID=mRNA_Ecto-sp13_S_contig1714.5066.1|Name=mRNA_Ecto-sp13_S_contig1714.5066.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1398bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1714:1..5092+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |