mRNA_Ecto-sp13_S_contig17138.5064.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: D7FX27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX27_ECTSI) HSP 1 Score: 468 bits (1204), Expect = 6.730e-153 Identity = 281/311 (90.35%), Postives = 286/311 (91.96%), Query Frame = 1
Query: 1 GPPTQAQREGILSMVLSTAAGAAELELEPLATALQARPVAGSPADEMSSGKPVVIASRDAPELEPEREPRTVFAHKDDARGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPTWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
GPPTQAQREGILSMVLST AGAAELELEPL+TALQARP+AGSP DEMSSGKPVVIASRDAP+LEPEREPRT+FA KDDARGGRG XXXXXXXXXXXXXXX A EWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRD AGQQTTQPSPPR LMWED MAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXX GPTW SVGGFS+AKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF
Sbjct: 532 GPPTQAQREGILSMVLSTVAGAAELELEPLSTALQARPIAGSPPDEMSSGKPVVIASRDAPDLEPEREPRTIFADKDDARGGRGEGRGSSGRAERKTXXXXXXXXXXXXXXXAIAEEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDLAGQQTTQPSPPRFLMWEDVMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXX-RGPTWRSVGGFSKAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 841
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: A0A7S2GUQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUQ8_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.230e-36 Identity = 81/193 (41.97%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 355 AKRLSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPTWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
A L+ +TPGMV GDL +L A+ ++ R +G + W+ + A+ P+ L+ LDV S + G W S+ G+ K RL+R++ PW +PE + +M + A +G +L GPSGCGKSL AQVLA E ANF+WV+SSELLS++LGE+E +LR+LF RAR AAP ILF
Sbjct: 33 AWELAEMTPGMVIGDLVQLCDAAQMEAMDLERSCSGG----------VEWKHLLRALETVPPQQLRELDVRSGQAMAR-----------EGICWDSIAGYDAVKDRLRRVIAGPWENPELYEQMSLGAVSGVVLTGPSGCGKSLTAQVLAAEIRANFIWVKSSELLSKWLGESERQLRSLFDRARKAAPAILF 204
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: G4THM0_SERID (Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4THM0_SERID) HSP 1 Score: 129 bits (324), Expect = 9.230e-30 Identity = 76/190 (40.00%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 364 LSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPTWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
+S+ T G VG DL+ LVR A +++R DS+ Q V+ + D + A+ P +L+ L V + +WS +GG S + RL+ ++WP LHPE FAR+GV G LLYGP GC K+L A+ LATE NFL V+ ELL++Y+GE+E +R +F++ARA APCI+F
Sbjct: 374 ISAQTHGYVGADLDGLVREAGTLAIKRMLDSSRIQEHG-----VITFADFLHALPSIRPSALRSLIVET-----------------PRVSWSDIGGVSHIRERLREAIEWPLLHPETFARLGVQPTKGLLLYGPPGCSKTLTAKALATESGINFLSVKGPELLNKYVGESERAVREVFAKARAGAPCIIF 541
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: A0A1V9YK99_9STRA (Cell division cycle protein 48 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK99_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.170e-29 Identity = 77/196 (39.29%), Postives = 108/196 (55.10%), Query Frame = 1
Query: 346 AEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPTWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
A+ A+R ++ T G V DL RL R A A S RG ++ W+D + A+ T P LQ L+V S S W+ G+ K RL L+ + + EA A +GV + +G LLYGPSGCGK+ + + LA +C ANF+ V+SS+L+S+Y GETE +R LF+RAR++APCILF
Sbjct: 388 ADVARRAAAATGGYVPKDLARLCRHALAASKHRGA-------------AIVAWQDFVKALGSTSPSQLQSLNVQSPASALA--------------AWTQFAGYVRLKERLLELISYRFERKEALAALGVQSVSGILLYGPSGCGKTTLVRGLAAKCNANFVRVQSSDLMSKYFGETEKAIRDLFARARSSAPCILF 556
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: D7FT73_ECTSI (Similar to spermatogenesis associated factor SPAF n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT73_ECTSI) HSP 1 Score: 127 bits (319), Expect = 5.490e-29 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 358 KRLSSLTPGMVGGDLERLVRTARARSLQRGRDSA------------------GQQTTQPSPPRVLMWEDAMAAVAITVPRSLQ--GLDVASAGSXXXXXXXXXXXXXGSGPTWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
K L++ T G VG DL+ LV+ A ++L+R R G+ T+ P L D AA+ + P L+ ++V S W +GG K+ L+ +V+WP HPEAF RMG+S P G LLYGP GC K+L+A+ LATE NFL V+ ELLS++LGE+E ++ALF RARAAAP I+F
Sbjct: 768 KELAARTHGFVGADLQLLVKEAALQALRRTRGGGNWGSISARAGCSDAGVEEGESTSAEGLP-TLTAADFRAALPLVAPSGLREVAVEVPSV-------------------KWGDIGGMEGVKQSLREVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARAAAPTIIF 959
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: A0A7S3YLE4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YLE4_9EUKA) HSP 1 Score: 117 bits (294), Expect = 8.270e-29 Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 634 WSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
W VGG +AK+ L+ V+WP HPEAF RMGV P G LLYGP GC K+L+A+ LA E NFL V+ EL Y+GE+E +R+LFS+ARAAAP I+F
Sbjct: 42 WKDVGGQVKAKKELKEAVEWPLAHPEAFQRMGVRPPKGVLLYGPPGCSKTLMAKALANESSRNFLAVKGPELFRMYVGESERAVRSLFSKARAAAPAIVF 141
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: F4P3A4_BATDJ (AAA domain-containing protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P3A4_BATDJ) HSP 1 Score: 120 bits (301), Expect = 9.790e-29 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 631 TWSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
+W +GG+ K RL +LV WP +PEAF ++GVS P+G LLYGPSGCGK+++ +ATE NF+ V+S +L S+YLGE+EA +R+LF+ AR PCI+F
Sbjct: 29 SWKKLGGYDHVKSRLFQLVVWPIQYPEAFLKLGVSPPSGLLLYGPSGCGKTMLVHAIATESNMNFITVKSQDLFSKYLGESEANIRSLFASARQLLPCIIF 129
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: J6F2U9_TRIAS (Peroxisome biosynthesis protein PAS1 (Peroxin-1) n=1 Tax=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) TaxID=1186058 RepID=J6F2U9_TRIAS) HSP 1 Score: 125 bits (315), Expect = 1.560e-28 Identity = 73/199 (36.68%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 343 AAEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPT--WSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
+AE +++ T G VG DL LVR + + ++QR + G+ + Q L + D A + P +++ + V + PT WS +GG +E K++L+ V+WP H + FAR+GV AP G LLYGP GC K++ A+ LATE NF+ V+ ELL++Y+GE+E +R +F +ARAA+P I+F
Sbjct: 416 SAEEIASIAARTHGYVGADLGSLVRESASAAIQRWHTAGGEGSPQ------LTYADMQATLPTIRPSAMREVFVET-------------------PTVRWSDIGGQAEVKQKLRECVEWPLTHADTFARLGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAASPSIVF 589
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: A0A7S3HLZ8_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLZ8_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.610e-28 Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 634 WSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
W+ +GG K+ L+ +V+WP LHPE FA +G++ P G LLYGP GC K+L+A+ LATE NFL VR ELLS++LGE+E ++ALF RARAAAP I+F
Sbjct: 73 WTDIGGMEPVKQSLREVVEWPLLHPELFASLGIAPPKGVLLYGPPGCSKTLMAKALATESSMNFLAVRGPELLSKWLGESEKAVQALFRRARAAAPSIVF 172
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Match: K1V6N9_TRIAC (Peroxisome biosynthesis protein PAS1 (Peroxin-1) n=1 Tax=Trichosporon asahii var. asahii (strain CBS 8904) TaxID=1220162 RepID=K1V6N9_TRIAC) HSP 1 Score: 125 bits (315), Expect = 1.970e-28 Identity = 73/199 (36.68%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 343 AAEWAKRLSSLTPGMVGGDLERLVRTARARSLQRGRDSAGQQTTQPSPPRVLMWEDAMAAVAITVPRSLQGLDVASAGSXXXXXXXXXXXXXGSGPT--WSSVGGFSEAKRRLQRLVQWPWLHPEAFARMGVSAPAGALLYGPSGCGKSLVAQVLATECLANFLWVRSSELLSRYLGETEAKLRALFSRARAAAPCILF 933
+AE +++ T G VG DL LVR + + ++QR + G+ + Q L + D A + P +++ + V + PT WS +GG +E K++L+ V+WP H + FAR+GV AP G LLYGP GC K++ A+ LATE NF+ V+ ELL++Y+GE+E +R +F +ARAA+P I+F
Sbjct: 416 SAEEIASIAARTHGYVGADLGSLVRESASAAIQRWHTAGGEGSPQ------LTYADMQATLPTIRPSAMREVFVET-------------------PTVRWSDIGGQAEVKQKLRECVEWPLTHADTFARLGVDAPRGVLLYGPPGCSKTMTAKALATESGINFIAVKGPELLNKYVGESERAVREIFRKARAASPSIVF 589 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17138.5064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17138.5064.1 >prot_Ecto-sp13_S_contig17138.5064.1 ID=prot_Ecto-sp13_S_contig17138.5064.1|Name=mRNA_Ecto-sp13_S_contig17138.5064.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp GPPTQAQREGILSMVLSTAAGAAELELEPLATALQARPVAGSPADEMSSGback to top mRNA from alignment at Ecto-sp13_S_contig17138:2..1506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17138.5064.1 ID=mRNA_Ecto-sp13_S_contig17138.5064.1|Name=mRNA_Ecto-sp13_S_contig17138.5064.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1505bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17138:2..1506+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17138:2..1506+ >mRNA_Ecto-sp13_S_contig17138.5064.1 ID=mRNA_Ecto-sp13_S_contig17138.5064.1|Name=mRNA_Ecto-sp13_S_contig17138.5064.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=933bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17138:2..1506+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |