mRNA_Ecto-sp13_S_contig1713.5059.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1713.5059.1
Unique NamemRNA_Ecto-sp13_S_contig1713.5059.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A6H5JGU6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU6_9PHAE)

HSP 1 Score: 1064 bits (2751), Expect = 0.000e+0
Identity = 566/802 (70.57%), Postives = 577/802 (71.95%), Query Frame = 1 
Query:   73 GFRWDTSTTNAVCDLDAVMVFFDDDAKSLALVDCVQDTYSNVAALIDDSVYNMEGGLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQ--------------------------------------------------------------------ALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVV------------------------------------------FCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEA------------------------------------STPAFFG----------IWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQ-------------------------------------------MVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKG 1881
            GFRWDTSTTNAVCDLDAVMVFFDDD +            +NVAALIDDSVYNME GLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQ                                                                    ALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPV LPGVA CGGGSGCVGGGNDG EDEAT+RSG+MIRSAESGHGPG+AFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVV                                          FCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRK++WEPCFQKLISVGSDNHLYEWEA                                      PA +G          + I    +VGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQ+PTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVT VAQ                                           MVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKG
Sbjct:    9 GFRWDTSTTNAVCDLDAVMVFFDDDVRG----------ENNVAALIDDSVYNMEAGLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQNNVVVLFMLSRLNASSPWIVTAIYDELRCHDTTALKHLMSGYVASPAISAVAMKLPSIPALCAALTSKALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVSLPGVALCGGGSGCVGGGNDGAEDEATVRSGTMIRSAESGHGPGIAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVVALGGARIIAMLIFLALWSCPPRSRSLCMIMDSRQTDLEIMIKFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKIMWEPCFQKLISVGSDNHLYEWEARQKFSGDAPTIRRLERKFESRTLRNTCANNMPSWTDDVPAEYGTAPKRCSELYVSISFFPSVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQMPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTTVAQVQGSFMCIQHLREFPTSALARFAFNVFLSFPTPHVPDGPPLPKMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKG 800
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: D7FLH5_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH5_ECTSI)

HSP 1 Score: 899 bits (2322), Expect = 0.000e+0
Identity = 439/451 (97.34%), Postives = 446/451 (98.89%), Query Frame = 1 
Query:    1 QDPFRELGAAQDTYPLANAPCLLVGFRWDTSTTNAVCDLDAVMVFFDDDAKSLALVDCVQDTYSNVAALIDDSVYNMEGGLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIV 1353
            +DPFRELGAAQDTYPLANAPCLLVGFRWDT+TTNAVCDLDAVMVFFDDDAKSLALVDCVQDTYSNVAALIDDSVYNMEGGLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPV LPG  G GGGSGCVGGG+DGGEDEAT+RSGSMIRSAESGHGPGVAFMTYVPELKQAYYA+KGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKL+WEPCFQKLISVGSDN+LYEWEASTPAFF IWIV
Sbjct:   20 KDPFRELGAAQDTYPLANAPCLLVGFRWDTATTNAVCDLDAVMVFFDDDAKSLALVDCVQDTYSNVAALIDDSVYNMEGGLEEDLEKMMLDLTRVDPRVSTIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRVVSSTRIFGVQHDTHHDQQALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVSLPGAGGSGGGSGCVGGGSDGGEDEATLRSGSMIRSAESGHGPGVAFMTYVPELKQAYYAEKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLMWEPCFQKLISVGSDNYLYEWEASTPAFFVIWIV 470
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: D7FLH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH4_ECTSI)

HSP 1 Score: 836 bits (2160), Expect = 1.010e-281
Identity = 416/432 (96.30%), Postives = 420/432 (97.22%), Query Frame = 1 
Query: 1351 VDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLDRYSIIALGDLTRVCLWHLDMETFKLTCFAKLSVPAGTLGLSLDVLNSIGVLRMEKPTATDSRSAESQPHDGDSAASREAE 2646
            VDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQ+PTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPH PGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHF+SALRRNVHIWDATSGEYVRKL+DVSPSADIVSACFALPFERRLILGTEDGKLLL+NYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLD YSIIALGDLTRVC WHLDMETFKLTCFAKLSVPA TLGLSLDVLNSIGVLRMEK TA DSRSAESQ   G SA  REAE
Sbjct:   32 VDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQMPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHSPGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFLSALRRNVHIWDATSGEYVRKLIDVSPSADIVSACFALPFERRLILGTEDGKLLLVNYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLDGYSIIALGDLTRVCFWHLDMETFKLTCFAKLSVPAETLGLSLDVLNSIGVLRMEKSTANDSRSAESQQQHGGSAGPREAE 463
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A836CMC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC0_9STRA)

HSP 1 Score: 228 bits (580), Expect = 6.100e-58
Identity = 185/621 (29.79%), Postives = 249/621 (40.10%), Query Frame = 1 
Query:  553 GLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVP-----LPGVAGCGGGSGCVG---------------------GGNDGGEDEATI------------------------------RSGSMIRSAESGHG--PGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGR-YLVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPE---HCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMF--------------------------------------------RDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNY-------EDMKAVSADCNHEIRVWDLSGCIAGGNTIP---CLMVFRLPHFPGTMQGPK-QIFLPFDQELSVKGYSNMLVATHN--VISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRK 2058
            GL R  F+  +F  LY+   GL+   DAAR VAML+ELFDQID+NGN+ VDW+EF SF +++   S  GT+++    D+F + Y   P      P VA                                G DG E E                                 R  S  RSA  G     G  FM +VP+    +    G+ +L ALD  G+  H H F D  F +   VAV T AY+P R  L V CSDHSVN M+E  +R                                                     W  ++++ GA+ + L      H +T+TD+V + ++E V T ++D RVCVW +P W LR                                               R H LGV  LSY RG LLS  FDW   AWD  RLE+   + GH A V A                 + ++A++ D +   RVWDL G            C++ F   H  G   GP     LP     SV GYSN+LV      V +   R+ ++ + VP  A YNA+S HFV ALR + H+W AT+G ++R+
Sbjct:  392 GLGRADFISVLFKQLYRQVPGLNDATDAARTVAMLEELFDQIDLNGNESVDWQEFLSFAVDISR-SSAGTSHSNNDLDEFFMSYVEAPHVHIHTPAVAXXXXXXXXXXXXXXXXXXXXAASLDIAAQWRAGLDGNEPEXXXXXXXXXXXXXXXXXXXXXKSDDRACKQRRHRVKSSKRSASDGTSVVSGEPFMVHVPQTGHVFVGTGGAPVLVALDGDGRRRHMHTFRDELFADDMPVAVLTAAYVPSRDVLAVACSDHSVNFMREAHDR-----------------------------------------------------WDTEDLSGGARAVDLADAASWHSDTVTDVVVLGDRESVATCAMDGRVCVWAVPAWTLRGELSNSNKLSVAEGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRAHRLGVLTLSYARGLLLSGAFDWVAAAWDVGRLERRALLQGHTAAVVAXXXXXXXXXXXXXXXAGDPVRALTLDASGWARVWDLGGGXXXXXXXXGSACILCF---HVGGV--GPYWNAILPCHAGASVAGYSNVLVGAGGPAVRALVPRRTRRPYQVPCYAAYNAASGHFVCALRGHFHVWTATTGSHIRR 953
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A8J2WQF6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQF6_9STRA)

HSP 1 Score: 227 bits (579), Expect = 7.630e-58
Identity = 189/667 (28.34%), Postives = 310/667 (46.48%), Query Frame = 1 
Query:  502 QALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHV-KADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPELKQAYYA-DKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVA-----VHTVAYIPGRY-LVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVFRLPHFPGTMQGP-KQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGG-----VVITSEIQC-KLKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLDRYSIIALGDLT-RVCLW 2454
            Q LP++K +F  +    GL    F+HAVF  L      L   + +AA  V ++ ELF QID+NG+  VDWEEFT+F I +G  +G  T+      D+F I Y                          D+  +R+    +S    H            LK   +   K +N  +  D + +   +H+F  P   EG+        VH V ++P +  LVV  SDH+  LM+EV N  G    Y    +V+   +HR L+W    + L ++   N L+ W+            D +        ++  H   +TD+V + +K L+ TSSLD++V +W +     R     H+LGV+ LSY +G L+S  FD      D    E++  + GH+  ++ VA +V  T  E++   + D + + + W +      G     +  F+LP+   +  GP + I  P ++ELS + + ++LV    +      K  K+F  P A  YN +S  +V A+ + + +++AT+G Y R+   +  S  I +A F +P ERR++LGTE+G++L++NY++G ++ + + H+ E+  +A             HGG     V+      C K+ +    G + L  V  A   VG     LA+    S+IA G  + RV LW
Sbjct:  264 QTLPRLKPRFLKQ--MDGLDIDQFIHAVFPALADVEPILKSSEREAANCVRLVGELFRQIDVNGDGKVDWEEFTNFTIAVG--TGSSTSKGGTTADEFEIRYVL------------------------DDGHVRTAQRHKSIHRMH--------CAHALKSRIFVIRKETNGFECWDRLAR--FEHDFYFPKIGEGKEDMQLDGYVHDVHHVPEKKSLVVALSDHTWRLMQEVLNCNGAHRTYKVTGQVVTVSVHRMLIWANTIKALFTICGKNRLHCWDVD----------DALKAQRSENDVNAHHGEVVTDLVFLRDKGLLATSSLDKKVKLWDVDNLMPRGTLCGHSLGVRCLSYAQGLLVSGAFDCXXXXXDVTSHEQVVVLEGHRRAISYVA-LVAETA-ENVHVQTLDDDGDCKYWKVD---RDGGIATQVDNFKLPYLDPS--GPTRNIVRPNNRELSQEDWPDLLVGGAKLFRLIPSKSMKDFQAPAACLYNKTSKDYVLAVGKALVVYEATTGFYARR---IPLSRQISAAAFDVPRERRVVLGTENGEVLVVNYISGEVISKIRAHTGEIVGVA-------------HGGDKARCVISAGRDNCLKVHQETSKGLELLRTVENAQSWVGS----LAYSPVLSLIATGSRSGRVALW 855
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A482S2P4_9ARCH (WD40 repeat domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P4_9ARCH)

HSP 1 Score: 219 bits (557), Expect = 3.250e-55
Identity = 163/652 (25.00%), Postives = 297/652 (45.55%), Query Frame = 1 
Query:  415 AVDLTPAWHQRVVSSTRIFGVQHDTHHDQQALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGT----NNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPE---------LKQAYYADKGSNILKALDSIGKPNHQHEFLDPYF----VEGQH--VAVHTVAYIPGRYLVVF-CSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPT--NYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPC--LMVFRLPHFPGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKM-IISADYHGGVVITSE 2295
            AV     +  R+  S R       +H    +LP++K KF  +    GL    F   +F  LY+T   +   A+AA  VA+L E+F QID NG+   +W+EFT+FC++ G+ S        N++ +  + ++IEY    L                      +  + +  M+  A+  H P    +  +PE          K   Y     + ++ + S+ K N   E  +        EG++    V+ V ++ GR +  +  SDHS+ + +E+ +  G    +    +  H L+H KL W      L S  SD  +Y W   T               A  I     H + ITD + +   ++ +T S+D+R+ +W   + +++ +   H  GV++LS    TLLSAGF+ E   WD    + +  + GH+ P+ A A+++C    + ++ +A++ D + E R+W++         +P   + +F + +    +   + + LP++   S   YSN++  +  ++ +   K  KEF  P A   + ++A  V+A+ +++ ++D   G + +   +V+   DI S C      RR+ LGT  G+++LIN + G  +D+   H+ EVT +   KA ++ + S    G V +  E
Sbjct:  141 AVPALEKFRPRLFGSVREICAALSSH----SLPKLKKKF--QRSEDGLPITQFTEVLFKQLYETHPRIIEDAEAAYTVALLQEMFQQIDYNGDGGTNWDEFTTFCVQTGLSSNSHNRSSGNDSNYSLEQYVIEYGEEVL--------------------HRDHVLSAYRMV--AQMRHVPETRKLLIIPEDSDNILILDEKFRQYTQLYPSKVQVVGSLNKKNEGGEGKEKKANASGKEGKYPRAMVYDVVFLTGREMYAYTASDHSITVCRELSSVNGTKVNFLQHNRFFHNLLHLKLCWSQKHDILCSTASDRVIYGWNIDT---------------ATIIFQVSRHSDIITDFIAVDSLDIFITCSMDKRIVLWSAMSRRVKGVLLGHKRGVRSLSVYENTLLSAGFECEAKTWDLANKDCVAILKGHRHPIVA-AKLMCDRAQSEKEHRAITVDESGEFRLWNIFVRERASEPVPVPTIQIFEMQNGEHPLNQFRFLALPYNSRCSTSYYSNLIACSTKLLHFIPEKNTKEFVPPTAMVCHEAAATLVTAVGKSILMYDLALGSFDQIFENVTMH-DIFSVCMDGERGRRMYLGTSSGEVILINSINGQTIDKVNYHTKEVTCLIQKKALRVSLFSCSMDGHVRVYEE 747
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A6H5JHV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV9_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 4.750e-49
Identity = 103/113 (91.15%), Postives = 108/113 (95.58%), Query Frame = 1 
Query: 2308 LKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLDRYSIIALGDLTRVCLWHLDMETFKLTCFAKLSVPAGTLGLSLDVLNSIGVLRMEKPTATDSRSAESQPHDGDSAASREAE 2646
            +++LQVLGFQHLDYVAAAVQSVGEPSTGL FLDRYSIIALGDLTRVCLWHLDMETFKLTCF KLSVPAGT+GLSLDVLNSIGVLRMEK TATDSRSAESQ +DG SAASREAE
Sbjct:    1 MEQLQVLGFQHLDYVAAAVQSVGEPSTGLVFLDRYSIIALGDLTRVCLWHLDMETFKLTCFVKLSVPAGTMGLSLDVLNSIGVLRMEKSTATDSRSAESQHYDGGSAASREAE 113
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: K3XCG3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCG3_GLOUD)

HSP 1 Score: 167 bits (423), Expect = 1.200e-38
Identity = 149/635 (23.46%), Postives = 278/635 (43.78%), Query Frame = 1 
Query:  526 KFFAEGHSRGLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGP-GVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQ-HVAVHTVAYIPGR-YLVVFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNT------------IPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKGYSNML-VATHNVISYAARKIKK-EFFVPPA-AEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVI--TSEIQCKLKELQVLGFQHLDYVAAAVQS 2370
            ++F E   +G+R+  F   +   + ++   L     A+ +VA+L E+F+QIDING+ +VDWEEFT+FC+ LG+I+                  Q + + G+                    AT     ++  A++ + P  V  +    +LK+    +  S ++   DS    +H    ++     G   +A+  V ++P R  L +  SDHS+ L   V    G    Y   +K++++    +L W    ++L++ G +            +  +W +D   V A+  H    H   I+D + +       TSS D  + VW++ + K+  +   H  GV  +  ++  LLS+GF+++   W       + T+ GH+  +     +   +N     AV+ D +   ++WDLS C+ G  T             P L +FR   F   + G        D   +      +L + T N+  Y  + I + E   PP    +N+ +  F+ ++   + +W+A SG  + + + +   AD+    F LP ER+L + T DG + L N VTG ++ ++Q H   ++ + +C  T  +IS  Y   + +  ++E +  ++ L+ +   H   + A   S
Sbjct:  255 RYFPE---KGIRKDDFARIILFVVMKSRPELQRVGRASALVALLFEMFEQIDINGDAWVDWEEFTTFCMSLGLIATC---------------EQEIGIAGL-------------------RATSYRQELVGGAKARNFPYQVHKIKCFTQLKRIAVIENKSAVILMYDSDLVLHHTMNCVEKLLGNGDVRLAILDVDHVPTRNMLAISSSDHSITLWSIVNATTGA---YVFSSKIVNRYPVARLKWCAPLKRLLASGVE------------YAQLWDIDTQRVDARLNH----HKERISDYLELGNTGFFATSSFDHTIAVWEIASLKVAFVLEGHIQGVLTMDCMQSILLSSGFEYQAYCWSIASRSLLVTLGGHQHRLIGAKFVSNRSNASVAIAVTGDESGHFKLWDLSRCVRGSTTDLTRMMQTFEIRSPSLCLFRT--FSCGLPGSAISASSSDLRKAKATEGELLDIITGNLHLYRFQAITQAEESAPPRYVVFNSVTNTFLGSVDGCITVWNANSGAKMEEPIHIR-DADVCGIVFDLPRERKLFIATSDGSIRLYNPVTGVLMTKSQIHDGIISSLLFCPRTCCLISTGYDRNICVPHSNEGKTDIEVLRTVENAHESCITACTFS 830
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A8K1CF91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF91_PYTOL)

HSP 1 Score: 155 bits (393), Expect = 5.180e-35
Identity = 142/592 (23.99%), Postives = 249/592 (42.06%), Query Frame = 1 
Query:  553 GLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVISGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLVVFCS-DHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGN------------TIPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVIT 2289
            G+ R  F   + + L ++   L        +VA+L E+FDQIDING+  VDWEEFT+FCI +G+++  G      +PD +   Y+                VG  N   +         + R A   +   V  M Y  E+           +L  +D + + + + E           V +  V Y+  R LV   S D+S++L   V    G    Y    K+  +    ++ W     +L++V S+               +W ++   V  +  H    H + +TD + + + ++V T S DR++ +  + T K+  +   H  GV+ L Y+ G LLS+GF+ +   W       I T+ GH+  +     +   +N     AV+ D     R+WD+S C+AG              + P L  FR+      +  P +     +  L +   S  L   H V++ +       F       +N+ S  FV ++   + IW+A SG  +  L+ +   A++    F LP +R+L + T DG + L N +T  I+ +T  H   ++ + +C  +  II+  Y   + ++
Sbjct:  273 GVDRRDFARLILLALLRSRPELQRPTRVTSLVALLYEMFDQIDINGDGAVDWEEFTTFCINMGLLTTNGKEVG--KPDFYGAAYRQK-------------LVGTRNFPYQIHRIRLMAGLRRIAVVENKSSVVLM-YDTEMM----------LLHEMDHVLRLDTRRETA---------VCILDVDYVTSRNLVALSSNDNSISLWSVVNATSGA---YVFAFKIGSRAPIPEIKWCNGLNRLVTVSSEG------------VQLWDLESRRVSTRLSH----HQDRMTDCLELPDLKVVATCSFDRKIAILDIQTLKVEFVLEGHVQGVKQLDYMHGLLLSSGFEHQAYCWSVSSRTLITTLGGHQTSLIGACFVSSRSNIRSAMAVTGDDAGHFRLWDISMCLAGSAKPIISVVQSFDVSSPNLCRFRVFTCGMILNDPNKHRDSDNDLLDIITGSFQLYKFH-VVTRSDDSSPVRFVT-----FNSISNWFVGSVDGCITIWNANSGVKIEDLIFIR-DAEVCGIAFDLPRQRKLFIATSDGAIRLYNPITAMIMSKTVIHDGIISSLIFCPKSLCIITTGYDRRICVS 803
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Match: A0A5D6Y2E8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2E8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.560e-34
Identity = 156/654 (23.85%), Postives = 270/654 (41.28%), Query Frame = 1 
Query:  553 GLRRHPFVHAVFMHLYQTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVI--SGKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIRSGSMIRSAESGHGPGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQHEFLDPYFVEGQHVAVHTVAYIPGRYLV-VFCSDHSVNLMKEVKNRRGCTHGYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWIVDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPV---------TAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNT----------IPCLMVFRLPHFPGTMQGPKQIFLPFDQELSVKG----YSNMLVATHNVISYAARKIKKEFFVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSACFALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPS-TGLAFLDRYSIIALGD 2433
            G+R+  F   V   L      L   A AA +VA+L E+F+QIDING+  VDWEEFT+FCI +G+I  S +    AA   +     Y+ VP+ G A                     +++ S            +A +    +LK+    +  S ++   D+     H+   ++    +    AV  V ++  R L+ +  SDH++ L   V    G    Y   +K++++    +L W    ++L++ G+++              +W +D   V A+  H    H + +TD   +       T S DR + VW++ T ++  +   H  GV AL Y + TLLS+GF++                  H+  +         TA       T      AV+ D +   ++WDLS C+ G  +          +    + RL  F   +  P       D    +K      ++++V    +  + A     E   P    YNA +  FV ++   + +W A SG  V   + +   A++    F +P ER+L + T DG + L N +TG ++ ++Q H   ++ + +C  T  +IS  Y   + I+     K  +++VL           V++  E   T  AF     ++A GD
Sbjct:  867 GVRKDDFARLVLRALVHARPELQHAARAAALVALLFEMFEQIDINGDARVDWEEFTTFCISIGLIATSDQELGGAA---NLHAPSYRQVPVGGGA---------------------VKARSFPYQ--------IARIKSFTQLKRIAVVENKSAVVLMYDADLVLQHEMSGVEKLLGKDSEPAVLDVEHVAARNLLAISSSDHAITLWAIVNLATGA---YVFASKIVNRFPVAQLKWCGPLRRLLAAGAEHAQ------------LWDIDAQRVDARLGH----HRDRVTDYAELGATGYFATCSFDRTIAVWEVATRRVAFVLEGHAQGVLALDYAQNTLLSSGFEYRAYCXXXXXXXXXXXXXXHQHRLIGAKFVSGRTAAGAAAAGTAL----AVTGDESGRFKLWDLSRCVRGSTSDLATLLQSFELRTANLCRLSTFSCGVAAPSAS-ASGDAARKLKSAETELADIVVGNLQLCRFRALAHADESAPPHHVVYNAVANTFVGSVDGCITVWSAHSGVKVEAPIHIR-DAEVCGIVFDVPRERKLFIATSDGCIRLYNPITGMLMTKSQIHDGVISSLLFCPRTCCLISTGYDRNICISHSTAGKT-DVEVL---------RTVENAHESCITACAFSADLDLVATGD 1453
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1713.5059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGU6_9PHAE0.000e+070.57EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLH5_ECTSI0.000e+097.34EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLH4_ECTSI1.010e-28196.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMC0_9STRA6.100e-5829.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2WQF6_9STRA7.630e-5828.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482S2P4_9ARCH3.250e-5525.00WD40 repeat domain-containing protein (Fragment) n... [more]
A0A6H5JHV9_9PHAE4.750e-4991.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3XCG3_GLOUD1.200e-3823.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CF91_PYTOL5.180e-3523.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y2E8_9STRA1.560e-3423.85Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1713contigEcto-sp13_S_contig1713:1229..15822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score174.5
Seed ortholog evalue2.2e-40
Seed eggNOG ortholog65071.PYU1_T014912
Model size2646
Hectar predicted targeting categoryother localisation
Exons21
EggNOG free text desc.protein).. Source PGD
EggNOG OGs1MFF7@121069,KOG0266@1,KOG0266@2759
Cds size2646
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1713.5059.1prot_Ecto-sp13_S_contig1713.5059.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1713 1229..15822 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462896.1169431-CDS-Ecto-sp13_S_contig1713:1228..13001681462896.1169431-CDS-Ecto-sp13_S_contig1713:1228..1300Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 1229..1300 +
1681462896.1285205-CDS-Ecto-sp13_S_contig1713:1738..18131681462896.1285205-CDS-Ecto-sp13_S_contig1713:1738..1813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 1739..1813 +
1681462896.1379597-CDS-Ecto-sp13_S_contig1713:2403..25981681462896.1379597-CDS-Ecto-sp13_S_contig1713:2403..2598Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 2404..2598 +
1681462896.147413-CDS-Ecto-sp13_S_contig1713:3291..34531681462896.147413-CDS-Ecto-sp13_S_contig1713:3291..3453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 3292..3453 +
1681462896.1576047-CDS-Ecto-sp13_S_contig1713:4636..48111681462896.1576047-CDS-Ecto-sp13_S_contig1713:4636..4811Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 4637..4811 +
1681462896.168649-CDS-Ecto-sp13_S_contig1713:5165..52421681462896.168649-CDS-Ecto-sp13_S_contig1713:5165..5242Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 5166..5242 +
1681462896.185868-CDS-Ecto-sp13_S_contig1713:5521..56911681462896.185868-CDS-Ecto-sp13_S_contig1713:5521..5691Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 5522..5691 +
1681462896.1957486-CDS-Ecto-sp13_S_contig1713:6324..64151681462896.1957486-CDS-Ecto-sp13_S_contig1713:6324..6415Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 6325..6415 +
1681462896.2041469-CDS-Ecto-sp13_S_contig1713:6722..68421681462896.2041469-CDS-Ecto-sp13_S_contig1713:6722..6842Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 6723..6842 +
1681462896.212236-CDS-Ecto-sp13_S_contig1713:7526..76041681462896.212236-CDS-Ecto-sp13_S_contig1713:7526..7604Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 7527..7604 +
1681462896.220265-CDS-Ecto-sp13_S_contig1713:8406..85411681462896.220265-CDS-Ecto-sp13_S_contig1713:8406..8541Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 8407..8541 +
1681462896.228358-CDS-Ecto-sp13_S_contig1713:8786..89241681462896.228358-CDS-Ecto-sp13_S_contig1713:8786..8924Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 8787..8924 +
1681462896.236535-CDS-Ecto-sp13_S_contig1713:9465..96511681462896.236535-CDS-Ecto-sp13_S_contig1713:9465..9651Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 9466..9651 +
1681462896.2446196-CDS-Ecto-sp13_S_contig1713:10080..101451681462896.2446196-CDS-Ecto-sp13_S_contig1713:10080..10145Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 10081..10145 +
1681462896.2526183-CDS-Ecto-sp13_S_contig1713:10737..108781681462896.2526183-CDS-Ecto-sp13_S_contig1713:10737..10878Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 10738..10878 +
1681462896.268428-CDS-Ecto-sp13_S_contig1713:11302..113661681462896.268428-CDS-Ecto-sp13_S_contig1713:11302..11366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 11303..11366 +
1681462896.277027-CDS-Ecto-sp13_S_contig1713:11889..120231681462896.277027-CDS-Ecto-sp13_S_contig1713:11889..12023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 11890..12023 +
1681462896.2902913-CDS-Ecto-sp13_S_contig1713:13011..131471681462896.2902913-CDS-Ecto-sp13_S_contig1713:13011..13147Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 13012..13147 +
1681462896.298912-CDS-Ecto-sp13_S_contig1713:13898..140001681462896.298912-CDS-Ecto-sp13_S_contig1713:13898..14000Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 13899..14000 +
1681462896.3131661-CDS-Ecto-sp13_S_contig1713:14797..149231681462896.3131661-CDS-Ecto-sp13_S_contig1713:14797..14923Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 14798..14923 +
1681462896.3242214-CDS-Ecto-sp13_S_contig1713:15618..158221681462896.3242214-CDS-Ecto-sp13_S_contig1713:15618..15822Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1713 15619..15822 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1713.5059.1

>prot_Ecto-sp13_S_contig1713.5059.1 ID=prot_Ecto-sp13_S_contig1713.5059.1|Name=mRNA_Ecto-sp13_S_contig1713.5059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=882bp
QDPFRELGAAQDTYPLANAPCLLVGFRWDTSTTNAVCDLDAVMVFFDDDA
KSLALVDCVQDTYSNVAALIDDSVYNMEGGLEEDLEKMMLDLTRVDPRVS
TIVAGVRSLSMTFQAHAVSSIKCVCASLRFRRFSNEGGAVDLTPAWHQRV
VSSTRIFGVQHDTHHDQQALPQMKNKFFAEGHSRGLRRHPFVHAVFMHLY
QTTKGLHVKADAARVVAMLDELFDQIDINGNDYVDWEEFTSFCIELGVIS
GKGTNNAAFQPDDFIIEYQPVPLPGVAGCGGGSGCVGGGNDGGEDEATIR
SGSMIRSAESGHGPGVAFMTYVPELKQAYYADKGSNILKALDSIGKPNHQ
HEFLDPYFVEGQHVAVHTVAYIPGRYLVVFCSDHSVNLMKEVKNRRGCTH
GYHSEAKVMHQLMHRKLVWEPCFQKLISVGSDNHLYEWEASTPAFFGIWI
VDEIAVGAKRIHLHPEHCNTITDIVCIAEKELVVTSSLDRRVCVWQLPTW
KLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHK
APVTAVAQMVCPTNYEDMKAVSADCNHEIRVWDLSGCIAGGNTIPCLMVF
RLPHFPGTMQGPKQIFLPFDQELSVKGYSNMLVATHNVISYAARKIKKEF
FVPPAAEYNASSAHFVSALRRNVHIWDATSGEYVRKLVDVSPSADIVSAC
FALPFERRLILGTEDGKLLLINYVTGAILDETQPHSAEVTQMAYCKATKM
IISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPSTGLAF
LDRYSIIALGDLTRVCLWHLDMETFKLTCFAKLSVPAGTLGLSLDVLNSI
GVLRMEKPTATDSRSAESQPHDGDSAASREAE
back to top

mRNA from alignment at Ecto-sp13_S_contig1713:1229..15822+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1713.5059.1 ID=mRNA_Ecto-sp13_S_contig1713.5059.1|Name=mRNA_Ecto-sp13_S_contig1713.5059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1713:1229..15822+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGATCCTTTCCGAGAGCTAGGGGCAGCGCAAGACACCTATCCGCTGGC
GAATGCACCCTGCCTGCTTGTGGTAAGTGAACCTATTCTCGAAGCCTCTT
GGCAATCGTGACTATCATCTGGGTAACAGACGTACATGGAGCGTTCGACG
CACAGAGCTGCTCTGGGCGTTGAAACGGATGAGAGTTCATTGACGTACTT
TTCTGACGGCGACTTCAGCATGGTGACTGGTCTTGCGTGGCCAATCCCTA
CGAAAGGTTACGGTCGGCAGTACAGTAGATTGGCCGTAGAAGGGATGGAA
ATTGGGTGCTATCACGAAGGGACATTAGATGGTAGGTGATAAGTACAACG
TATTAGGCAAGCAAAACGTGTGACCTTGAAGTCGAACAGAAGAACCACCA
CAGAACATAACCGTGTGACCGTAAGAAGCGCCTTCTCAGCCCCTTTCTGT
TACCTCCCTAATGCTCTCTCTGTCTCGGTGTACCGAATGCATGCATGTCC
TGTCACACAGGGTTTTCGATGGGATACGTCCACCACGAATGCTGTGTGCG
ATCTTGACGCGGTGATGGTCTTCTTTGACGATGATGTGAGAGGCGAGAAG
CAACCAGCGCATGAGGTTTCGGTTTTCCTTCGAGTACGTTGTCCATTTTA
TTCTCGTATCGTGCTATTGCTACCGTGGTGTTCGTGCACTTGCGTGCGAA
CCTGTGGAATCATACGCAGGCAACGTAAACTATGTAGCTGTAGTTTAGAC
ACGTGGCACCGGCTCCTTGCTCCAAAGCAAACAACCTGAATGGACACCTC
ATATTCTGTTTCTCCAACTCATGGCGTGAAATCGCTCAAACACGCAGACC
TCTAAACAGCACACGAAAGCTTGCGAAAACGCATTCCACAAAGCATCTCG
TGCAATGTGTTGGCACATCCCAAAGTGGGTCGAGCTCGAAAGATTACCTC
TGGCTTGGTGTACATTCCTAGGGATGTTTGTTTTGTGCCTGGTAGATGCA
CGAGCGGCGCCGGTGAAGCAGTGTTCGTCAGGGGCACACGACGCAACGGT
GGCCGTTGTCAGCCTGAGGTTCCAAAGGTTTCCCGTGAGAAATCACCTTG
AGTTGGAAGTAGTCTGTTGATGCGCCGCCTTAATGTTTGCTGTGCGGGAC
CGCGAAATGCTCGGGCCACATCAAGGCAAAGTCGCTGGCGCTAGTGGACT
GCGTCCAGGATACGTACAGCAACGTAGCCGCTCTCATCGACGACTCGGTG
TACAACATGGAGGGCGGGCTGGAGGAAGACCTGGAGAAGATGATGCTGGA
CCTTACAAGGGTGGACCCGAGAGTGTCCACCATCGTGGCCGGGGTCCGAT
CTTTATCGATGACCTTTCAGGTAAAATTATGGTATTTTCACGACAATTGT
ACAACCTGACCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTATTGTTGTTATTGCTGTTCTTGTTCTTGTTCTTGTT
CTTGTTCTTGTTCTTGTTCTTGTTCTTGTTGGCGTCGTCGTCGTCGTCGT
CGTCGTCGTCGCTGTCGTTACCGTTGTCGTTTTTTGTGTTGTACTAGACG
ACGTCACGGTGAAGATAAGTGCAGGGTTTCCCTTGCTGTACGTCCTCCGG
TGCCGCATCCTCTTTTCTGATTGACTCATATCTCTGAGTGTTGCGGTCGC
AGTTCACTGGACTGGAAAAACAAGACGAACTTGCTCTAGTGGCATTGATG
GGTCCGAGGCCCATTCCCGTCGTTACCATGGCCTACTATTGCATCGATGA
CGATGAAGGCAACATCATCAGGGAGACAATTCTTTATCTGGACTTCCTGG
AATCGTACGCGCATTTAATCTTGGGGCCCTACGCCTTGACAAGGCACGGG
TATTCATCACATAGATCTATATATACATACTTCATAATACGAAAACGTAG
AAGCACATATCTATTGAAAAACAACTTGTCATTCACAAGCACTCTTATGT
TCGAACACGATAGGCTCATGCGGTATCCAGTATAAAATGCGTATGCGCCA
GCCTCCGCTTCCGGAGGTTCAGCAACGAGGGCGGGGCGGTCGACCTCACG
CCCGCTTGGCACCAACGCGTGGTGTCATCCACAAGAATCTTCGGAGTGCA
GCACGACACGCACCACGACCAGCAGGTAGGTGTGAGAATGAAAAGGCCAT
GCAAAGGCTCACCTGACGTTTGGGGGAACACAGAGGTGTCCGTGAGGCCA
TTCGTGGGTACGGGGTCTTCGTACGCGGCGTCAGGCGAACGGGGATGACG
GAATTCACCCAGCCTTCATTGGCTTCGCCGGAACATGTTTTCAGCATGCA
AGTGGCAAATACTTCATTTCGAAACGGTTCGTCCGTCCGGTTCTACATCG
CCCGCGTATAAGTACATGCGCATCGGTTTTCAGGCTGAACAACCGCAATC
GAGGAACACCTCAGGGAACGCGCTCTGTTTGGTATGAACGCTGGCTGCGT
GTGTTTCGTTTAGAGACGTATGACGTCGTCCGAGTCGTACCACTGAAGTG
CCGACGAGCTGGCTTGTTTCTCTACCCGGGCAATATTGTAGGGATGTACC
TCCAAACTGCTTTCCATTCCCTTCTCCCAAGAAACCGTTAGGACTCGACC
TAACTCTGCAGGACATTCGCTGAATAATTGTTCATCGTCCTTTTCAGAAC
AACGTCGTGGTGCTGTTCATGCTTTCGAGGCTGAATGCGTCTAGCCCTTG
GATCGTTACCGCCATCTACGACGAGCTACGGTGTCACGATACCACCGCGC
TGAAGCACCTCATGTCTGGCTACGTGGCGAGCCCCGCCATCTCAGCGGTA
GCGATGAAACTGCCCAGCATTCCGGCCTTATGTGCGGCGCTCACGTCGAA
GGTACAGTCGTCGAGATCGTGTGTTCTATGTGCGACTGATGGCGGGGGCG
GAATCATCCGTTCTTCGCCTTGCCTTGGCGAAGTTATATTCCATCCGTTT
ACCACATGCCACATTCGCTCCTAAGATGGGCGTTCTCTGTCCCATTTAAA
CACCGTTCCAGTGTGTGTGGGTTCTGCAGCCACACCATCCTGTAGAGGTA
TTTCATTTTAGCCGGGGGGGGGTATAGTGGTCGCCATGCCGACATGGCTT
GGATGCAAACAGAGAGATATCGTGGAGGGAGGGATGAGTAACCTTGCCAC
GTGCCCATCAAACCCACCAACCCGCCGTGTCACTTTCGAAGGTAACCGTA
AGGAGAGATCTGGGTCGCCCTTGAACATGGCTGCCATCACAGCAAATTCT
CCCTCGTAGGAACCATGGACTGCTTTCGGTGACCCGGCAAAGACGTTGTT
ACCGGCAGGCTCTCCCGCAAATGAAGAACAAATTTTTCGCCGAGGGGCAC
AGCCGAGGCCTCAGGCGGCACCCCTTCGTCCACGCGGTGTTCATGCACCT
GTACCAGACCACCAAGGGGCTTCACGTCAAGGCCGACGCGGCGAGGGTGG
TGGCGATGTTGGACGAGCTATTCGATCAGATAGGTAGTTTACGCATGCGA
TACCCCGGTTGCATGTCCGGCTATTGACCGTGTGGTCAACATCGAACCCT
CCCTCTCGGTCGTTTACAACGCTTGGTTGGTCCAAGCCAATAGGATGCCG
ATTCCGACCGACGTGTATTCGGAAAGCTAACGATAAGGCCGACGCTTCGC
GTTTCGGCACAAGACCATACATTCCTGTGGAAGCAGCCGGGCGTTGAAGC
TCGGCCTGAGGGGCTGATATTCACATTCAATGCTAAACTGGTTCTAGAAT
TATGAATCTATCCGCCGTTGGGAATATGATTCTGTAAGATACATGCAGAG
AAAACTCATCAAGGTCGTGTCTGAAAATCATCGTCAGATATTAACGGCAA
CGACTACGTGGACTGGGAAGAGTTCACGTCGTTCTGCATCGAGCTCGGGG
TCATCAGTGGGAAGGTTGGTCTGTTCGTTCGCCGGTTGTCTGCCGGTTGC
GTTTTCTGTCATGTCTGTTTAGATATCTATCTGTCGGTCGGTAGTTCTGT
CCGTCTGTGTTTCTGTCTGTGTACCTGTTCGTCTGTGTGCTGCCTGTCCG
TCTGAAAAAGAGCACGGGCGACATGACCAGTGCAAGTATTCAGCGGAAAG
CCGGCACACTTTCCACACTTTGAGCAGCAGGTTCGAGCGCATTTCCCCGC
GATCCCCGTTTCGCTGAATCGCAAACTCATTTGACATGAGCAGGGAACCA
ACAATGCTGCTTTCCAGCCGGACGACTTCATTATCGAGTACCAGCCCGTG
CCTCTGCCGGGAGTGGCCGGTTGTGGGGGCGGTTCTGGTTGTGTTGGCGG
TGGGAACGACGGGGGCGAGGACGAGGCGACTATTCGTAGCGGCAGCATGA
TCAGATCCGCAGAGTGAGAGGCGTAAATACCGAACGAAACATAGTCATCT
GAATCTTTGGTTACGGCCCCCGTTCTTCCCAGCGTCTGTCGCTGTTCTGG
CTGCTCAATGAAGTTTCGGGCGATAAACGCTAGAAGGTTGCTCACATCAG
GTACACAGGAAACGGTATGTGGAGAAGAAGGCAGCAGCAGCAGCAGTAGC
AGCAGCATAGCAGCAACCGGGGTGGTATCAGCAGTAGAACACATCCAACA
CAAAAAATGATTTCGGCGCCACCAACACTACCACACAACCAACACCACCA
ACAGCGTCATGGCCGCAATGACACAAAGAGTGACACGCACCATACCAAAC
CCATGACGGCAACATTTGCCTAAAATTGATTCTGAAGGTCGAGCTTCCCC
CCGCGTCCTAGCTTGCTGTCCTACCGAGTTTTGCCAACCTAGCAGAGCGA
ACGTCTGGGAGACGCATTTAGGCGTCGGTAAACATGTCCGTTCCCCTGCT
TCTCGTGGGTGTATGGAAAAGATGTTCCCGCGCACATTCCTCCATCCACA
AGTTCCTCCTACTATGTGCCCTTGCCCGCGCCACGAAATTTTTGCCGCTG
CAATTGCTGATGTCGCCGTCATCTGCGCCCGTTGCCGTCTTCCCAGGTCC
GGGCACGGCCCAGGCGTTGCCTTCATGACGTACGTTCCTGAGCTGAAGCA
GGCATACTACGCTGACAAGGGCTCCAACATCCTGAAGGTGCTTGCTGTGT
GGTACGCACGTGGCCCACGTCAGCCCCCGCAATACCTCCGGTGGGATAGA
ACTAGCGAAAAACCTGTGGTTGTGGCTTAGTATTGTTCATGTTGTTGATG
ATGTTGATGTTATTGATGGTGGTGATGCTGTGTTTTCGTCAACAAATTAA
ATCTTATTTTACCTACGCCCGAGGCCTGCCCAGTTTCCCTGGTCACAAGT
TGACCCAACCTTTCGGCTAACGAATGCGATAAGAATTTCCACTGTTCGAC
TTTTCTCCACGACGTGCGTCGTCGCCCCCCTTGGTCTCATGAAGGCGTTG
GACTCCATCGGGAAGCCTAACCACCAGCACGAGTTTCTGGACCCGTACTT
CGTTGAAGGCCAGCACGTGGCAGTGCACACGGTCGCCTACATTCCCGGCC
GTTACCTAGTCGTGGTGAGTCCATCAACCGTGACGTTCGTGGCTTAGAGG
ATACCTCGCTTTGCTCAGTTGTTCTCTTGGGGGTTGGCTCTGGCGAGGCA
AGCGAGTCCCGGTTCCATCGCATGATGGAGGCGCCGACTGGAGCACGAAT
CATTGGTGATTCTGTTAGCGCTTTGGCTTCTACTAAGCGGCAGCATGACA
CTGGGCTTATGAACCATTTCGCGATGAGGTTATCCCTGAAAGCACTGGGT
TCCTTGTGGCGAGCTACACAGTCCGATTGCTGCCTCCTCGCACCCGCCGT
CCGGGGCGCTTCGGGAGAACCGTCCCGCGAGCTTTCTGCTGTTGTTGAAA
GGATCATCGTGGTACGAAAAAGAAAAAGAAACCAACTAAGGGGTCGAATG
AGAGCGCTGTACATACGATGTCAGCATTGTCTCGGGGACAATAGACCGGG
GGGTTTCGCAGCTACGTTTCATCGATCGTCCTCACGGAAAGATGTTTTGG
ATGGGCTCTCCGGAAGACTACTACTACGAGGATGTGAGGCTTGTGTTTGT
GTTGCTTCCGGGCAACCCCTTCAAGGAGATACACATAAGCCGCGGCGATA
CTCATATTTCGCTTGTTCTATGGTCGTGCACGCCTCGCTCGCTTTCTCTC
TGCATGATTGTGGATTCCCGACAAACGGATCTCGTACTAATGACAAAGTT
TTGCAGCGACCACAGCGTGAATCTCATGAAGGAAGTCAAGAACCGGAGGG
GGTGCACACACGGCTACCACAGCGAGGTGTGAAATAAACATTGTGTGACG
GCAGGCGACGCGTGTGGGTGCGCACGTTCATTCGGGTGTCTACCGAGGAT
GTTAGCACCAGGGCGAACCGTCGAGTATCCTGTGCGTTTTGTTGACAAAG
GTGTTCTTAGAACGAGACAGATTCATTCGCGAGTGTCTACGGACTCCTCC
AAGCGCGTAAGAATCGGATGAAACGGTAGGGTAGAACACCGATCTTTGAA
TACGAAACTGAGTCAACTTCTTTCGAGGAGTATTTGCAATCGGCCCACAC
ACCCGTGATTGAGGTATGTTCTCGCGTTGTCTCTGTGAAACCACGTCACT
GTGTAGGGTCGTGCCGCTTGTGTAAGCTATGCCGTAGAACATCTTCCAGC
GGGCAGGTGCACCCCAGAATTGCAGAGAATATCATCCATCGTAGACGGGT
TGCGGCACGATCTCCCAAATGAGGGCCTGGAAAAGGGGCCGTATGCCTGC
CCTTGGTTCCATGGCATGCAACATGTGCGTTTCGTGGTCGCTCTTCCAAA
AAGCTTGGTCGTACGCGTACGAGTAGGCATCCCAGGAACTTCATCTTCAT
GTACTGGGATTTAGCTAGCCGGAGTTCGAGTAGTGCGCTACATGACTCAT
AGTGTGGCGCGGACAGAAATCATCTCTCATCCGTGAACCTTGAAATCGGT
TTGAATTCGACGTATTGTCCTCCTCTCTTCGATACTGTCGATCTTTGCTT
TTTCCGTTCGGCATAACATACGGGGTGATCCTATTCTCCCTCCTCTCTAC
AGTTTCAACTCTCTTCACTATGACACAGGCGAAGGTGATGCACCAACTAA
TGCACCGCAAGCTCGTGTGGGAACCGTGCTTCCAGAAACTTATCTCCGTT
GGCTCCGACAACCATCTCTACGAGTGGGAGGCAAGTACACCGGCGTTCTT
CGGGATATGGATTGTGTAGTATGATCATGGCACTGTAGAAGTTTCTCTCT
CACTCTTTTACCCCAGCCTTGTCTCTGCTCTGTCTCATGTATCTCTCTGT
ATCTCTCTCTCGATATCGTGTGTCTGCGGGTCTCTCTTTGTCTCTCATAG
TTATCTCTCTCGTTCTATCCCTCTCCTTGTGTGTCCCTCTCTCTTTCGCT
CTATCCGGGCATATTGTGTACGCATCGCGTATTCTCGCTGTGGGTAAATC
TGGGTCAGGTCGACGAAATTGCAGTGGGTGCCAAGCGCATTCATCTTCAC
CCCGAGCACTGCAACACCATCACGGACATCGTATGTATCGCGGAGAAGGA
GCTCGTCGTCACTAGCTCCTTGGACAGGCGTGTTTGCGTGTGGCAGGTGA
CGATGGCTCTCTAACATTAGGCACCTGCACCCTTTGGCCAATCAGCGATC
ATTTCATTCGAGGGTGTTATCAAGGTTGAACGGCGACATGTTTGCCTGTT
TGGTCATCGACGACCCGAGATTGTAATTGATGAAACTTATTCATGGTGCC
CCCCTTATTCCGCCCCGCGCGCGACATGGCAAGGAAGAATGTGGGTTGCG
GACTGCGAACACGAGAAACGGGATGAATTTAGCAGGAAGATAAATCTACA
TGTGACGCTTCCCTCCCGGGCCCCCTTCCCCGACGCAACGATCTTTCTTA
GTATCACATGGCATTTGCCACCTGCAGAGCTCTTGTAGCAAGACTCGAGC
TCCTTGAGGAACAAGCAGGAGCAGGCTCTCTGCGTCCACCAGCGGTCAAC
ATTCTTCCTCTGAAGACATTCAGGAAGAGAAATCAGTCCTCAACAGCGAC
CCAACCACAAGAATGACCTAAGGGCAGAACCTACACCCCTCCCGCTCCCC
CCTTGCTTTCCTTCCCCCCCTCCTTTTTTGCGACCAGTTGCCGACCTGGA
AACTCCGCGCAATGTTCCGCGACCACACGCTCGGCGTGCAGGCGCTTTCG
TACCTCCGCGGCACTCTCCTCTCCGCCGGTTTCGACTGGGAGATAATCGC
CTGGGACGCGGATCGGCTGGAAAAGATAGGAACCATGAACGGACACAAGG
CTCCTGTCACGGCAGTCGCACAGGTACAGAGGAGAGAGAGAATTAAAACA
ACAGACGAGACAGAAAGATAGACAGACGATAGAGAGAGATAGACACACGA
GGCAGACAGAAAGACAGCGACAGATGCAGAGATAGAAACAGACAGACGGA
CAGATAGGGAATACAAGCATGGAGCGAAGGAATGCCAAAGGGAGAAGGCG
GTACCCCCATGGAACAAACGTAGTTTCTCCAAAGCATTTCGCCATCGTGT
TCATGCGGTAGCAACGATATCCTTCGTAATAGAACGATGTCCTCTTCTCC
CTAGTGTTTGGCAGGCGATTCGTGGGAATGGAGGAATGCATGTACATTGA
ACACCTCCGCGGATTCCCGACAAGCGCTTGTGTACGGTTCGCCATTGATG
TGTTCTTGTCATTTCCTCCACCCATGTTCCGGATGGATCAATTCTCCTCA
AGATGGTCTGCCCGACGAACTACGAGGACATGAAGGCTGTCTCCGCTGAC
TGCAACCACGAAATCAGGTGTGACGAAACGGTCGAGCTGCTTGCGTATCG
AATATGGCGAAGATATTATGGCCTGGGGCTTGTGCCGTAGAGGAAACGTG
CGAAACGTTCGAGTCGATTTGCTAGTCTGTAACACTGCGATAGATACCGC
GTGGATAGGTTGGTTTTATGGCCATTCCCCGCGCTGGCTCCTGTGGGGAG
TTAAACGCCTTCCGGCGTCAGGGGTTAGCGATAGAATCTCTGCAATATCC
GTGTCTTGTTCTGTGTCAACATACCCAACAAGCGGAGAATCACCTTTCCG
TGGGGAAAAAAGCTACCTTCCAGGTCAACGACGAACAAATGCTGAGGAAT
AAACCCTTCTTGCGATACGAATTTTGGCGAACACCGCAGAAGAAGAGTAG
AACAAGCAAAAGTCTGCGTCGCCATCCTCTTGCTATAGTCGTGAGCCCCA
CTTTACCGAAAGGCGAGAAGGCTGGCGTGCAAGATAGACGGGATGACGCA
CACCGTGTGTATTCTTCCCTATTAGCCCACCGCTCACAAGCACCATACCT
GCTGCGGACGCAACAACAACTGCCGGACTCCACGCGTTTCGAATGGTGTC
ACGAAACAGGGTGTGGGACCTGAGTGGTTGCATCGCAGGAGGCAACACGA
TCCCATGCCTCATGGTTTTCCGCCTGCCTCATTTCCCGGGCACCATGCAA
GGGCCAAAGCAAATATTCCTCCCTTTCGACCAAGAGCTGTCGGTGAAGGG
GTGAGTTGTCGACGTTGGTGTTAGGAGGGGGTGGGGGGGGGTTCGTGAAG
GGACTTAGCGGCGTGCGCGTGCTAGTCGATCTGTCAATGCATCTCACAGC
GTCGTGCTGACTTGAACTAATTCACGCCCGCATAAATGCTTTTCGGGCAC
ATACTTGCCGTGCACCCTAGCCGGCTGATCTTCACGAACACACCCACCCC
CCCAAGCCAACGTGAACGTGCTGACGGTTTCGTGTCGACACGACCCGCCC
GCTAAGAGAAAGCAAGGTAGGTATGACCGGTGTTCATAACACCCCGTCTG
CGAGATGTACGACCAAGGCTTTTGGGGCCCCTCCGTTTCGAAAAAAAAAT
CACGATTTATGCCCAAACTTCGAGATCTCCACACTCCACTCGCCCACCGT
TGCTCTTGGTTCCGGCCCCCGAAGGTACTCCAACATGCTCGTCGCCACCC
ACAACGTCATAAGCTACGCCGCACGAAAGATCAAGAAGGTGAGAGGGCCA
TGACGCCTTTCATTTTGCATTCTCATAGGGCAGGTCAGGGTTCTCCCGTT
CCATGCATCCTGCCTTCGGGCCGTCGAGCTCACTACATATGGTGCGCAAA
AGTTGCGCATGTCGAACGACCTTCGAATCCAGAGAGAAACCCCACATGTA
GTTTCGGCACACGGGGGGTTATTCCGGTCTCCGCCAAGGGCTACCTCGTG
ATGCTTGTAAACCGAGAGAGCTCCACGATCGCATGGATTCGGCCGCCTCG
ACCTTGCCAGGCCGGGCCGATGCCTCGAACACCAGACAGGCAACCCCAAT
AATATCCTGGTCAGAGAGGACTCTCACTAAGAACACCTGACCATACCAGT
AGCACTGCTCGATAACGCCGATACTAACATTTCACCATCCCAACCAAACC
AACACGCAGCCAACATCATCGCGTCGGCAAACACGGTAGCTTCCCTAGCA
AATCGTCAACGAATGACACTGAATGCGCGACGCTGGGCACCGTGGAACGT
TAATACTCCAGGAATTCTTTGTTCCTCCGGCCGCCGAGTACAACGCGAGC
TCCGCCCACTTCGTTAGTGCCTTGAGGCGCAACGTTCACATCTGGGACGC
CACGTCCGGGGAGTATGTTCGGAAGCTCGTTGACGTCAGCCCGAGGTACC
CATACTCATGTTGATCTGAGTGCGGTATTCGCACATCACAGACAAAGATT
TTGCGTAGTCGTAGCCTTGGTGGCCAAGCTGGTAGCTTTGAAGCTTCCTT
GCGGCGGGATTGAGAGTTGGATCCAACGAGGTGTCTCGTTGACTCAGTTG
GTGCCGAGGTAGTACTGTTGGAAGCGCTTGTTCATGGGTGCACTTGAAGG
AATGGACTGCGAGACACGATTCGCGTTTCACACCAAGACATTTTCAATGG
GTAGTCTGTCTCTCTGTGGTTGTTTGTGTGTTTTCTGAAAGGGCGTTCAC
CGAAATGTTTGTTCTGAGTGACCCCGACTTGGAGTTCTACAGAAAAAACG
GCAAGGGTGAGAATAGGGCAAGCAGACATTGTGGGACACGATTTACAGGC
AGGGTGACATGGAAAAACCAAACAAAACAACGGTCCCTGTTTTCTCTTCA
ATTGCTGTACACTGTTATGTGCTTCGTTAACAAGAGAGTAGTGGATGGTA
GGTGGTGGGATGCCGTGAAAGGACCATGAGGAAGCTGGAGTACGTGGTGA
TTTGCGGGGGGCTAGGAAAAAAAGTCGCGTGGACTCCACACGCCACAACA
AATGATCCCTCCGTGACCTGAATAATGCCACACGTAGAAGGACAAGCCGT
TCATGATGCCCTCTAGGCGTGCTCACACCGACAAGCATTCAAGCTTGCGG
GAATTTTCATACCCGCGTAACGATGGCCATAGCTGCTGACCTCATCGTCT
GATTTCCTGAGTACATCACACTTTCTTTCAAACATCACACGGAAACTCGT
GCGCTTGATTGTGACGCCTGGTACGTCGGAAAAGGGTTCGACGCCCCCCT
TCCCGGCTGTCGTAGTTTGAACCCAGGAAGTATGGTCGGGGTGAAGGATA
TCGCCAACATGACGATGTCTCACTAACTCCCCTTGCCTACATTCTGCTTA
CCGGCCCTCACTCGTCATCGGGACACGCCCTAGCGCGGACATTGTCAGCG
CGTGCTTCGCTCTCCCGTTCGAGCGCCGGCTGATTCTCGGAACGGAGGAT
GGGAAGCTGCTCCTGATTAACTACGTCACGGGGGCTATTCTTGATGAGAC
GCAACCACACAGTGCCGAGGTTGGTCCTTCTACGGGTCAGCTATGGTCGT
TGTTCGATCGCGTGCATTTTCGCGTAGCCTGACCGCGAGCTGTATCTGAA
TGCTAGGAAACATACCACTGCCTCACCAATGGAGTAGCCTGTGGGATGGG
GTTTTTGTGTTTTTATCTACGTCGCGGTTTTCTAGGAGATTTCACCGGTG
ACGACGGCTATATCAGTCCATATAATTACGAGGGACAATTGTCGCTGTAT
GGTCGGTATAGGAGAATTGTACATGTATCGAGGAGAGTCGCACCGTAGTT
TTTCCTAGTCGTTTGTCTTACTGGGTGCGATAAAGAATTCCAGAAAAGCT
TAGCGCTCCTAATACGGTAGGGAAAGTACCACAACGGCAGATAATGGTCA
AACAGAATTGTTGGCAGCTTGATTCGGGTGAAACAACTTTTGCAAATATT
TCCTAAAGGTTCGACAGTCGTACCGCTTTCAGCATCCGCTTGTTGCCAAA
AGCACCGAACACATGCGGCCAGTCATCGAAGGCCGAACAACTACGGCAAG
AAACTTATGTCTTCGAGCACGACCACGTGAAATCCCTATCATAACCTTTA
CGCATAGCGCTGTCCACGCAATCCGCAAAGCGTGGGCTACAGCGTATCTT
GTGAAAAAAGCGGGCGTTGGGTGTGAAGTGGTTAATCTCCGGAACTCAGC
CTCATTGGATTGTTCACGTGGTTGTTGAGTGGCGTCGTGCGTTTTGCCGT
TTTTCGATTGCTGTGTGCAGGTGACGCAGATGGCGTATTGCAAGGCGACA
AAAATGATTATCTCCGCCGACTACCACGGAGGCGTCGTCATCACAAGCGA
GATACAGTGCAAGCTTAAGGAGGTAACCGTTAGCCGGAGATGTTGCAGGT
CCACACATGTTCGAATCCTACCGTGATCGTCGACGGTCATCGAAAGACGA
TGGCCAGTCGGTCTCTCTCTCTCGCCTGCGCGAGGGGGTAGCCGACTCTG
CCGGATGCTCCTCATCTGTTCCAATAGCATACAACTGATGGAACATTTAA
GTGCAAACTGATTTTGCCGCTAGGCCGAAGAAAATGATTTCAACCGCCGT
CTAGAGTCAACTACTACCGGTCGTGAATTTCAAGAAAGTGCTGGAGAGAA
AATCAGGATATTTTGCACGTGCCTACAAACGTACCCGGCATTGATGCAAT
AATTTACCTGTTCCGCACGTAGGTCGACTCACTCCCCGCCCTCTTCACCC
ATATCGTTTACGCCACGGATCTGCCGTGCGTCAACACAGCTACGAAAGTT
GAGGGACGTGCACGGGCCCGGGGTTCCTATAACTGGGATGGCATACTCGT
ACCGTCTCAGCAAAATCGTCACCTGCTCCAGCAGCGCCGAGGTGAAAAAA
TAGCGGAGATCCGGGGGCTCACCCTTCGCCAATCGAGGGTGGGCAGTACG
GTGTAGGTGCGGGTAGGTCACAGCTTCAAACCCTGGGTCCTCGAAGCGTG
TTCCAAAGTGCCTTCTTTTTCGTACTCACATGTATCCACACACACCTACG
AGTTGCAGGGTCTTTATATCGGGAGGACCATTCCCCGCGCAATGTCTTCA
AAACTTCAGACGCGACTTATGGTTGGCACCCCCTCTTCGTCTTACCCCTC
TCAATCTGCACCCGCCCAGCTACAAGTGCTCGGGTTCCAACATCTCGACT
ATGTGGCGGCAGCCGTGCAGAGCGTCGGGGAGCCTTCCACGGGGCTGGCG
TTCCTCGACCGCTACTCTATCATCGCCCTGGGAGACCTAACGAGGGTAAG
CGAGACGACGAAAGAATGAGACGACTGAAAGAGACGTAGGGGCAGCGACC
GACGCGGAAACGAAAGCAGAGACGCAAGCAGAGCCAGAGATAGTACGGAC
AGAGACAAAGCCACAGAGCGATAGACGTGGAGACGTCAATACAGGAAAAA
CGAGACAAAAGACGGTGAGAGGGGCGAAGACAGTGGCGTGACCGAAGCGG
GGGAACAGAGAGTCGCACAAGAGAGAGCCGTGAGCTTCACTCATATCCCA
AGCAAGAATACAATTCCTGAGGCCTATCCCCCCCCCCCTCGCGAAATATT
CTCGTTGTCCCCTCGGTTTCCACCGAATTGTCGGCAGTCCTCCGATATCC
TTCCTCAAATGACGAGGGTTGTCGAATCAGAAGCAAGACACTGACTCCGC
CCCCCTACCCTCCCCCACCGTGAATGAGGTGGGCGCCAAACAAATTTTCG
CCAAGCTTTCCTCAGGATGACAAGCGAGGTGTTCCAAAGAAACGAACTTA
CAGCACCAATACGCGCGTTAACATCATGTGCATACGTGCGCCTAAAGTGC
GTTCATCAAGGCAGTGCGTACAACGTACTGACTGCTGCCGTGCATCACGG
ATGGATGCCAAGACACGACAATAACCACAACAAAGACGACGACGCCCGCG
ACAACCCCCAAGAAACTCTGAACGGAAACCCGTATCTCAGGTGTGCCTGT
GGCATCTTGACATGGAGACGTTCAAGCTAACCTGCTTCGCGAAGCTGAGC
GTGCCGGCGGGAACCCTGGGGCTGTCGCTGGATGTCTTGAATTCCATCGG
GGTGCTTCGAATGGAAAAGCCCACCGCCACCGATTCTAGATCAGCAGAGA
GCCAACCGCACGATGGAGACAGTGCTGCCTCGCGGGAAGCGGAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1713:1229..15822+

>mRNA_Ecto-sp13_S_contig1713.5059.1 ID=mRNA_Ecto-sp13_S_contig1713.5059.1|Name=mRNA_Ecto-sp13_S_contig1713.5059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2646bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1713:1229..15822+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGATCCTTTCCGAGAGCTAGGGGCAGCGCAAGACACCTATCCGCTGGC
GAATGCACCCTGCCTGCTTGTGGGTTTTCGATGGGATACGTCCACCACGA
ATGCTGTGTGCGATCTTGACGCGGTGATGGTCTTCTTTGACGATGATGCA
AAGTCGCTGGCGCTAGTGGACTGCGTCCAGGATACGTACAGCAACGTAGC
CGCTCTCATCGACGACTCGGTGTACAACATGGAGGGCGGGCTGGAGGAAG
ACCTGGAGAAGATGATGCTGGACCTTACAAGGGTGGACCCGAGAGTGTCC
ACCATCGTGGCCGGGGTCCGATCTTTATCGATGACCTTTCAGGCTCATGC
GGTATCCAGTATAAAATGCGTATGCGCCAGCCTCCGCTTCCGGAGGTTCA
GCAACGAGGGCGGGGCGGTCGACCTCACGCCCGCTTGGCACCAACGCGTG
GTGTCATCCACAAGAATCTTCGGAGTGCAGCACGACACGCACCACGACCA
GCAGGCTCTCCCGCAAATGAAGAACAAATTTTTCGCCGAGGGGCACAGCC
GAGGCCTCAGGCGGCACCCCTTCGTCCACGCGGTGTTCATGCACCTGTAC
CAGACCACCAAGGGGCTTCACGTCAAGGCCGACGCGGCGAGGGTGGTGGC
GATGTTGGACGAGCTATTCGATCAGATAGATATTAACGGCAACGACTACG
TGGACTGGGAAGAGTTCACGTCGTTCTGCATCGAGCTCGGGGTCATCAGT
GGGAAGGGAACCAACAATGCTGCTTTCCAGCCGGACGACTTCATTATCGA
GTACCAGCCCGTGCCTCTGCCGGGAGTGGCCGGTTGTGGGGGCGGTTCTG
GTTGTGTTGGCGGTGGGAACGACGGGGGCGAGGACGAGGCGACTATTCGT
AGCGGCAGCATGATCAGATCCGCAGAGTCCGGGCACGGCCCAGGCGTTGC
CTTCATGACGTACGTTCCTGAGCTGAAGCAGGCATACTACGCTGACAAGG
GCTCCAACATCCTGAAGGCGTTGGACTCCATCGGGAAGCCTAACCACCAG
CACGAGTTTCTGGACCCGTACTTCGTTGAAGGCCAGCACGTGGCAGTGCA
CACGGTCGCCTACATTCCCGGCCGTTACCTAGTCGTGTTTTGCAGCGACC
ACAGCGTGAATCTCATGAAGGAAGTCAAGAACCGGAGGGGGTGCACACAC
GGCTACCACAGCGAGGCGAAGGTGATGCACCAACTAATGCACCGCAAGCT
CGTGTGGGAACCGTGCTTCCAGAAACTTATCTCCGTTGGCTCCGACAACC
ATCTCTACGAGTGGGAGGCAAGTACACCGGCGTTCTTCGGGATATGGATT
GTCGACGAAATTGCAGTGGGTGCCAAGCGCATTCATCTTCACCCCGAGCA
CTGCAACACCATCACGGACATCGTATGTATCGCGGAGAAGGAGCTCGTCG
TCACTAGCTCCTTGGACAGGCGTGTTTGCGTGTGGCAGTTGCCGACCTGG
AAACTCCGCGCAATGTTCCGCGACCACACGCTCGGCGTGCAGGCGCTTTC
GTACCTCCGCGGCACTCTCCTCTCCGCCGGTTTCGACTGGGAGATAATCG
CCTGGGACGCGGATCGGCTGGAAAAGATAGGAACCATGAACGGACACAAG
GCTCCTGTCACGGCAGTCGCACAGATGGTCTGCCCGACGAACTACGAGGA
CATGAAGGCTGTCTCCGCTGACTGCAACCACGAAATCAGGGTGTGGGACC
TGAGTGGTTGCATCGCAGGAGGCAACACGATCCCATGCCTCATGGTTTTC
CGCCTGCCTCATTTCCCGGGCACCATGCAAGGGCCAAAGCAAATATTCCT
CCCTTTCGACCAAGAGCTGTCGGTGAAGGGGTACTCCAACATGCTCGTCG
CCACCCACAACGTCATAAGCTACGCCGCACGAAAGATCAAGAAGGAATTC
TTTGTTCCTCCGGCCGCCGAGTACAACGCGAGCTCCGCCCACTTCGTTAG
TGCCTTGAGGCGCAACGTTCACATCTGGGACGCCACGTCCGGGGAGTATG
TTCGGAAGCTCGTTGACGTCAGCCCGAGCGCGGACATTGTCAGCGCGTGC
TTCGCTCTCCCGTTCGAGCGCCGGCTGATTCTCGGAACGGAGGATGGGAA
GCTGCTCCTGATTAACTACGTCACGGGGGCTATTCTTGATGAGACGCAAC
CACACAGTGCCGAGGTGACGCAGATGGCGTATTGCAAGGCGACAAAAATG
ATTATCTCCGCCGACTACCACGGAGGCGTCGTCATCACAAGCGAGATACA
GTGCAAGCTTAAGGAGCTACAAGTGCTCGGGTTCCAACATCTCGACTATG
TGGCGGCAGCCGTGCAGAGCGTCGGGGAGCCTTCCACGGGGCTGGCGTTC
CTCGACCGCTACTCTATCATCGCCCTGGGAGACCTAACGAGGGTGTGCCT
GTGGCATCTTGACATGGAGACGTTCAAGCTAACCTGCTTCGCGAAGCTGA
GCGTGCCGGCGGGAACCCTGGGGCTGTCGCTGGATGTCTTGAATTCCATC
GGGGTGCTTCGAATGGAAAAGCCCACCGCCACCGATTCTAGATCAGCAGA
GAGCCAACCGCACGATGGAGACAGTGCTGCCTCGCGGGAAGCGGAA
back to top