mRNA_Ecto-sp13_S_contig17103.5048.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: D7G5P1_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P1_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 9.860e-160 Identity = 221/224 (98.66%), Postives = 222/224 (99.11%), Query Frame = 1
Query: 1 TVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVLLEGEDDQADATQEL 672
TVYVRQAMCVGAGQCEK CKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGH VKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVLLEGEDD+ADATQEL
Sbjct: 182 TVYVRQAMCVGAGQCEKKCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHTVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVLLEGEDDKADATQEL 405
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A835ZCK1_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK1_9STRA) HSP 1 Score: 253 bits (647), Expect = 2.500e-80 Identity = 117/209 (55.98%), Postives = 149/209 (71.29%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGK-TFGSLYIRFSIAFPKALSAEQVTTLRGVL 630
+VRQ MC+ A +CEK C +C GPG+A+R ++ PGFVQQ+Q+RDD C+ARGKCW K C+ACP GPT+ E V LT EVQKGM+D + IVFEE ADE GH+ G LV I+TL H +F R DDL M+M+I L++AL GFE F HLDG V VK+ G+T+PG L EGMPRR G+ + G L IRF++ FPK LS +Q ++R VL
Sbjct: 151 FVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVL 359
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A835Z111_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z111_9STRA) HSP 1 Score: 253 bits (645), Expect = 1.100e-78 Identity = 116/218 (53.21%), Postives = 155/218 (71.10%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQG---ITSPGDVMQLKKEGMP----RRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVLLEG 639
+VRQ MC+ AG+CE C +C GPG+AVR +LGPGFVQQ+Q+RDD C+ARG+CW + C+ACP+G T+ E LT ++ KG RD + IVFEE+ADE GH+ G LV + TL HPDFTRR DDL +D+++PLV+AL GFE HLDGH V+V + +T+PGDV+ L EGMP + G+ G+L+I+F++ FP+ALSA Q +R VL EG
Sbjct: 157 FVRQVMCLRAGECETKCPECHGPGLAVRTQRLGPGFVQQMQVRDDRCVARGRCWNRRCAACPRGATEPEGADLTVDLHKGARDGEKIVFEEMADEAAGHKPGDLVLTVSTLPHPDFTRRGDDLFLDLDVPLVDALVGFETTVVHLDGHAVRVSRGAGGAVTAPGDVLVLAGEGMPLTARAAAAAGRERGALHIKFNVVFPRALSAAQQAQIRAVLGEG 374
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A482T1Z3_9ARCH (J domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1Z3_9ARCH) HSP 1 Score: 230 bits (586), Expect = 3.870e-72 Identity = 109/200 (54.50%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQ 606
Y+RQ +CV A CEK +DCQGPGI VRM QL PGFVQQVQ+ D +C+ARGK WK C ACPKG T++EE+ LT ++ GM+D D I F++VADE +GH G LVFII+ DF R DDLHM+M I L E+L GF+ +FKHLDGH V V K +T +V+++ EGMP++G K FG LYI I FP+ S +Q
Sbjct: 79 YLRQVLCVEASSCEKKSQDCQGPGIKVRMQQLAPGFVQQVQVSDPSCVARGKAWKSPCKACPKGMTEEEEIQLTLDILPGMKDGDQIKFDQVADEAVGHIPGDLVFIIQQAPDTDFRREGDDLHMNMVITLHESLVGFKKSFKHLDGHQVVVDKSDVTYCSEVVKMVGEGMPKKGGK-KVFGDLYITLLIDFPRRFSEQQ 277
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A7S2UXH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXH4_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.210e-70 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVL 630
Y+R+ +C G+CEKNC DC GPG+ V+ QL PGFVQQVQ D NC+ARGKCW++ C ACP G T+ E++ LT ++ G+ + D I FE VA E IGH G LV ++ + H F RR DDLH + IPL +AL GF HLDGH V ++K+ +T G V++++ EGMP++G G FG +Y+ SI FP LS EQ +LR +L
Sbjct: 173 YIREVLCTNHGECEKNCPDCHGPGVRVKTQQLAPGFVQQVQASDPNCVARGKCWRRGCKACPNGQTETEQISLTVDLAPGLAEGDNIRFEGVASEQIGHIPGDLVLLVAPIRHEYFERRGDDLHTTINIPLKDALVGFSTEINHLDGHKVLLRKEDVTYFGQVVKIRGEGMPKKGGTGG-FGDMYVECSITFPAQLSEEQKASLREIL 379
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A4D9DAZ8_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAZ8_9STRA) HSP 1 Score: 217 bits (552), Expect = 3.980e-66 Identity = 97/208 (46.63%), Postives = 139/208 (66.83%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVL 630
Y+RQ +C+ +C K +CQGPG+ +R L PGF+QQVQ+RD+ C+ARGK W+K CSACP G TQ EEV LT ++Q GM+D + I F +VADE +GH AG LV ++ + H +TR DDL + +++ L++AL GFE K +DG VK+ K +TS G+V ++K +GMP+ G +G G L I + + FP+AL+ EQ L+ L
Sbjct: 152 YIRQVLCMNHKECTKPAPECQGPGVRLRQQHLAPGFIQQVQVRDETCVARGKAWRKGCSACPNGQTQPEEVKLTVDIQPGMKDGEMITFSDVADEKVGHSAGDLVVHVQAIPHEFYTRHGDDLRVSLKVGLLDALVGFETTVKQVDGRDVKLNKPTVTSHGEVQRVKGQGMPKSGGSG--LGDLLITWEVTFPEALTDEQKALLKKAL 357
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: K0T887_THAOC (J domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T887_THAOC) HSP 1 Score: 208 bits (529), Expect = 1.860e-62 Identity = 105/217 (48.39%), Postives = 134/217 (61.75%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVLLEGEDDQAD 657
YVRQ +C +C KN ++CQGPG+ VRM Q+ PGFVQQVQ RD+ C+A GK W+ NC CP G TQ+E++ LT ++ KGM + + FE VADE G AG L F I H F R D L++ MEIPLV+AL+GF F HLDGH V +T VM++ +GMPRR NG+ FG LYI F + FP LS EQ +R + G+ D D
Sbjct: 162 YVRQTLCTNWQECMKNNQECQGPGVKVRMQQIAPGFVQQVQQRDERCVAHGKMWRSNCRDCPNGKTQKEKIDLTIDLNKGMYPGEAVTFEGVADEKPGMTAGDLNFFIVEEKHDHFHRDGDHLYVTMEIPLVDALTGFSHEFTHLDGHKFTVPVNDVTECDHVMRVAGKGMPRR--NGRGFGDLYITFDVDFPDTLSEEQKRGIRKIF--GKKDPTD 374
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A7S0GKJ3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKJ3_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.470e-62 Identity = 106/210 (50.48%), Postives = 138/210 (65.71%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFII-ETLVHPD-FTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVL 630
YVRQ +C+ C K K+CQGPG+ V+M Q+ PGFVQQVQ RD+NC+ARGK WK NC CPKG TQ E++ L+ EV GMR + + FE VADE G AG L F+I + V+P FTR D L+ MEIPLV+AL GF+ +HLDGH ++ +T VM++ +GMPRR +G+ FG LY+ F I FP+ LSAEQ + +L
Sbjct: 146 YVRQTLCMNWEMCMKTSKECQGPGVKVKMQQIAPGFVQQVQQRDNNCVARGKMWKPNCRDCPKGKTQPEKISLSVEVTPGMRAGERVSFESVADEKPGMEAGDLHFVILQVDVNPVLFTRDGDRLYKTMEIPLVDALVGFKRTLEHLDGHKFTIQVDKVTECDHVMRVPGKGMPRR--SGRGFGDLYLTFEIDFPEELSAEQKAGINKIL 353
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: B8BTB9_THAPS (J domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTB9_THAPS) HSP 1 Score: 206 bits (525), Expect = 7.000e-62 Identity = 101/208 (48.56%), Postives = 130/208 (62.50%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLRGVL 630
YVR +CV +C K ++CQGPG+ VRM Q+ PGFVQQVQ RDD C+ARGK W+ NC CP G TQ E + L ++QKGM + + FE V+DE G G L F+I + H F R D L++ MEIPLV+AL+GF F HLDGH V G+T VM++ +GMPRRG G FG LYI F + FP L+ +Q +R +L
Sbjct: 160 YVRNTLCVNWQECMKANQECQGPGVKVRMQQIAPGFVQQVQQRDDRCVARGKMWRNNCRECPNGQTQPETIELEIDLQKGMYPGEAVTFEGVSDEKPGMNPGDLNFVIVQVGHEFFHRDGDHLYVTMEIPLVDALTGFSHEFTHLDGHKFTVNVDGVTECDHVMRVSGKGMPRRGGRGG-FGDLYITFDVDFPDTLTEKQRKEIRKIL 366
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Match: A0A0G4GG88_VITBC (J domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG88_VITBC) HSP 1 Score: 204 bits (518), Expect = 6.860e-61 Identity = 96/205 (46.83%), Postives = 129/205 (62.93%), Query Frame = 1
Query: 7 YVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHMVKVKKQGITSPGDVMQLKKEGMPRRGSNGKTFGSLYIRFSIAFPKALSAEQVTTLR 621
Y RQ +CV +C + +DCQG G+ V Q+GPGF+ Q Q++DD+C+ GK WKK C ACPKG T++E V+LTA V+ GM DTI FE VAD +G+ G L F++ H F RR +DL +EIPL++AL GFE F+HLDG +KK +T G+ M +K +GMP RG +FG L I F I FP L+ +Q +R
Sbjct: 161 YRRQVLCVNVDECTVDRRDCQGAGLRVVTQQMGPGFIVQNQMQDDSCVGPGKAWKKKCKACPKGQTEEEPVLLTAYVEAGMTSGDTITFEGVADHKVGYEPGDLNFVVTETQHDRFVRRGNDLLTTVEIPLLDALVGFETQFRHLDGKDFPLKKDDVTDHGETMTVKGKGMPVRGGKEGSFGDLLITFHIKFPDKLTKKQKELVR 365 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17103.5048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17103.5048.1 >prot_Ecto-sp13_S_contig17103.5048.1 ID=prot_Ecto-sp13_S_contig17103.5048.1|Name=mRNA_Ecto-sp13_S_contig17103.5048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp MCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKback to top mRNA from alignment at Ecto-sp13_S_contig17103:1..2654+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17103.5048.1 ID=mRNA_Ecto-sp13_S_contig17103.5048.1|Name=mRNA_Ecto-sp13_S_contig17103.5048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17103:1..2654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17103:1..2654+ >mRNA_Ecto-sp13_S_contig17103.5048.1 ID=mRNA_Ecto-sp13_S_contig17103.5048.1|Name=mRNA_Ecto-sp13_S_contig17103.5048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17103:1..2654+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |