mRNA_Ecto-sp13_S_contig17100.5046.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17100.5046.1
Unique NamemRNA_Ecto-sp13_S_contig17100.5046.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A4Y2HFD6_ARAVE (Zinc finger BED domain-containing protein 1 n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2HFD6_ARAVE)

HSP 1 Score: 129 bits (324), Expect = 8.630e-29
Identity = 99/296 (33.45%), Postives = 150/296 (50.68%), Query Frame = 1
Query:    4 QPFNVVEAPSFENLLRVAANDASLGAPSRHDVS-TKVSAMAKEAEGKLRDMLKGTH---PALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTCHLLQLCALKILNEPH--VKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDFITNSMMPMLASTLHV 873
            QPF +VE   F   ++V     +L  PSR  ++ T + A  +EA  KL+++  G       LTTDCWTS++G  FMAVT+H++  D  EL S  L C  F  SHT++ LA  + +V  ++ IKD  V   +D AANI KA K+ L+    GC  H + L A+K   E H  VK    K   +  H   S+ ++ KL  +QK   L  + +     TRWNS ++  +R       ++   A L  +K +D++  E+ W     +  VL+P     E++  DFI+    P  +S + V
Sbjct:  167 QPFRIVEDEGFRAFVQVLNPSYTL--PSRKTIAQTFLPAAYEEAMHKLKEVYSGNEIGSVTLTTDCWTSSNGDSFMAVTSHYLNFDM-ELNSNVLECFLFTESHTSENLATELKKVADEWNIKDKIVLCVSDNAANITKAIKEILQWRHFGCLAHTINL-AVKNSLEVHENVKDLIKKIKSIVTHFKRSTKSSNKLTEIQKQNGLQPKKLINDVETRWNSTFDMLVRFTELEMSIRTTIALL--DKDVDVLLPEE-WLLAQKIKLVLQPM---KELI--DFISGEKYPSASSVIIV 450          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A4Y2QK48_ARAVE (Zinc finger BED domain-containing protein 1 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2QK48_ARAVE)

HSP 1 Score: 128 bits (322), Expect = 9.750e-29
Identity = 98/296 (33.11%), Postives = 146/296 (49.32%), Query Frame = 1
Query:    4 QPFNVVEAPSFENLLRVAANDASLGAPSRHDVS-TKVSAMAKEAEGKLRDMLKGTH---PALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTCHLLQLCALKILNEPH--VKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDFITNSMMPMLASTLHV 873
            QPF +VE   F   ++V     +L  PSR  ++ T + A  +E   KL+++  G       LTTDCWTS++G  FMAVT+H++  D  EL S  L C  F  SHT++ LA  + +V  ++ IKD  V   +D AANI KA K+ L+    GC  H + L A+K   E H  VK    K   +  H   S+ ++ KL  +QK   L  + +     TRWNS ++  +R       ++   A L  +K +D +  E+ W     +  VL+P    T     DFI+    P  +S + V
Sbjct:  167 QPFRIVEDEGFRAFVQVLNPSYTL--PSRKTIAQTFLPAAYEEVMHKLKEVYSGNEIGSVTLTTDCWTSSNGDSFMAVTSHYLNFDM-ELNSNVLECFLFTESHTSENLAIELKKVADEWNIKDKIVLCVSDNAANITKAIKEILQWRHFGCLAHTINL-AVKNSLEVHENVKDLIKKIKSIVTHFKRSTKSSNKLTEIQKQNGLQPKKLINDVETRWNSTFDMLVRFTELEMSIRTTIALL--DKDVDALLPEE-WLLAQKIKLVLQPMKELT-----DFISGEKYPSASSVIIV 450          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A671V861_SPAAU (BED-type domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671V861_SPAAU)

HSP 1 Score: 127 bits (318), Expect = 2.890e-28
Identity = 86/278 (30.94%), Postives = 130/278 (46.76%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLKGTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTC--HLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLD---LVYTEDDWANTDAVVEVLKPFCNATEVMQGD 825
            P NVV+   F  +++    +     PSR  ++T+V A     + +L+  L   + ALTTDCWTS +   ++ VT H+I  D  +++S  L      G HTA  LAD++N+ +  +G+    VA   D A NI  A     R  WH   C  H LQL A+      ++       +RL  H + S+ A + L A QK  +LP   +  SC TRWNS  E   R+   R+ +  + +     K  D   L   ++ W   + V  VL+    AT VM  +
Sbjct:   94 PINVVDGQEFREVIKYI--EPGYNIPSRTTITTRVEASYARKKAELKTQLATANVALTTDCWTSLNTESYITVTCHYIEPDW-QVMSAVLLTESMSGRHTADNLADKLNQTVETWGLTGRVVACVHDNARNIVSANSP-TRVNWHSVPCFAHTLQL-AINDGFATYINRVIVAASRLVQHFNHSNPANKALAAKQKQMQLPSHKLIQSCKTRWNSVSEMFNRLTEQRWAMSAVLSDCTVTKLTDARTLELRDEYWQLMEDVAPVLETLKCATTVMSTE 366          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A1A8V609_NOTFU (Zinc finger BED domain-containing protein 1-like n=3 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8V609_NOTFU)

HSP 1 Score: 124 bits (310), Expect = 4.480e-27
Identity = 88/278 (31.65%), Postives = 128/278 (46.04%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLKGTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTC--HLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLD---LVYTEDDWANTDAVVEVLKPFCNATEVMQGD 825
            P NVVE   F+ L++    +     PSR  ++T++ A   + + +LR  L   + ALTTDCWTS +   ++ VT H+I  D   + S  L        HTA  LAD++N+ +  +G+    VA   D A NI  A     R  WH   C  H LQL A+      ++       +RL  H + SS A   L A Q+  +LP   +  SC TRWNS  E   R+   R+ V  + +     K  D   L   ++ W   + V  VL+    AT VM  +
Sbjct:  114 PINVVEGQGFQELIKYV--EPGYNIPSRTTITTRLEASYAKKKTELRTQLATANVALTTDCWTSLTTESYITVTCHYIEPDW-RVKSAVLLTESITVRHTADNLADKLNQAVETWGLTGRVVACVHDNARNIVSANSP-TRVNWHSVPCFAHTLQL-AINDGFTTYINRVIIAASRLVQHFNHSSLANIALKAKQQQMQLPSHKLIQSCKTRWNSVSEMFNRLTEQRWAVSAVLSDRTVTKLSDARTLELRDEYWQLMEDVAPVLETLKCATTVMSAE 386          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: UPI001CD05EF0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Drosophila mojavensis TaxID=7230 RepID=UPI001CD05EF0)

HSP 1 Score: 115 bits (289), Expect = 3.080e-25
Identity = 84/302 (27.81%), Postives = 149/302 (49.34%), Query Frame = 1
Query:   10 FNVVEAPSFENLLRVAANDASLGAPSRHDVSTK-VSAMAKEAEGKLRDMLK-GTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTC--HLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDF-ITNSMMPMLASTLHVFCITKAAKL 900
              +VE P F+ L+   ++      P+R  ++T  +  +  E  G++ D L+  T   LTTD WTS S   ++AVT H+I +DK  L S T+ C  F  SHT++ L   + +++ ++ +++  +A+ +D A NI  A K      W    C  H L +   K L +  + +   K   +  + + SS+  +KL  +Q    LP+  +    PTRWNS ++   R+       + + A L T  + DL+ + +DW+  + V+ +L+PF   TE +  +  +T S + +L   L    +T  A +
Sbjct:    9 LRLVEEPEFKKLIDDVSHAPGYKLPTRKTLTTSLIPKVRDELLGQILDNLRMATAVCLTTDGWTSLSNESYIAVTVHYINQDKTVLQSHTIACEAFEESHTSENLFGFLKKIVGKWELQNKVMAIASDNAHNIVGAIKL---GNWKQVRCFAHSLNIIVQKALEK--ISSVRTKVKAIAEYFNRSSSGLKKLKDMQAMFNLPQLKLTQDVPTRWNSTFKMFQRL---SMLKEAVVAALST--RTDLILSPEDWSLIEGVLPILQPFYQLTEEICAEKNVTLSKIIVLVGLLQKKMVTLNASI 300          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A0F8ASK1_LARCR (Zinc finger BED domain-containing protein 1 n=2 Tax=Larimichthys crocea TaxID=215358 RepID=A0A0F8ASK1_LARCR)

HSP 1 Score: 116 bits (291), Expect = 1.270e-24
Identity = 83/279 (29.75%), Postives = 125/279 (44.80%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLK-GTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTC--HLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLD---LVYTEDDWANTDAVVEVLKPFCNATEVMQGD 825
            P N V+   F++L  +A  +     PSR  V+++V A  ++ + +L+  L   T  ALTTDCWT+ +   ++ VT H+    K EL S  LT +     HTA  LA+++N+++  +G+     A   D A NI  A     R  W    C  H L L          +        RL  H H S+ AT+ L   Q+   LP   +  SC TRWNS  +   R++  R+ V  + +     K  D   L   +D W   + +  VL     AT VM  +
Sbjct:   94 PINTVDGAGFQDL--IAFIEPGYKIPSRPSVTSRVEARFEKKKSELKTKLATATGVALTTDCWTALTTESYITVTCHYF-NAKWELKSAVLTTTSMSDRHTADNLAEKLNDIVETWGLSGRVTACVHDNARNIVLANNP-TRVSWKSVACYAHTLNLAVNDGFAAAGISRAIVAAGRLVKHFHHSTIATKALEEKQEQMSLPPHRLIQSCKTRWNSVCDMFDRLVEQRWAVSAVLSDRSVTKLADARTLELRDDYWQLMEDIAPVLGTLKCATTVMSAE 368          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A3B3WT67_9TELE (Uncharacterized protein n=1 Tax=Poecilia mexicana TaxID=48701 RepID=A0A3B3WT67_9TELE)

HSP 1 Score: 115 bits (287), Expect = 2.020e-24
Identity = 96/331 (29.00%), Postives = 150/331 (45.32%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLKGT-HPALTTDCWTSTSGTPFMAVTAHWIPED--KPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKA---------------GKQFLRPE-WHG--------------------CTCHLLQLCALKILNEPHVKA-TFAKHNRLTGHLHSSSAATEKLHALQKAAELPER-TIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDFIT--NSMMPMLASTLH 870
            P ++VE  SF + L V   D+      R  +++K+  +A E    L+  L  T H ++T D W+      F+ +T HWI ++  K E+ S  L    F+GSHT +R+ ++   V  ++ IKD    + +D AAN++KA                     PE WH                     C  H LQL     L E  V +   +K ++L+  LH+S+   +   A     E  ER +IP S  TRWNS   Q   VL       +LCA L+      L++T  +W     +V++LKPF  AT++ QG+ I   ++++P + S  H
Sbjct:   50 PLSIVENKSFRHFLTVV--DSKYSPICRRTMTSKIEGLAAEKHLMLKTQLSQTDHVSVTVDIWSDRKMRGFLGITVHWIQKEIEKLEVKSKLLAFERFKGSHTGERICEKFEAVCDEYNIKDKLDYIISDNAANMRKAFTVCFPTDQGEEPDDNHHLDDPELWHDLPLEDQETVGASLGKKHRLQCFAHTLQLVVRDGLTETKVASPALSKLSKLSSLLHTSTTLKDVFEA-----EFGERKSIPASVITRWNSTVRQVKAVLQCEHL--KLCAILEKAGHKKLLFTIREWNLLKEMVDILKPFEEATDLTQGEKIVTISAVVPSVLSLNH 371          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A553QHN2_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QHN2_9TELE)

HSP 1 Score: 115 bits (288), Expect = 2.430e-24
Identity = 88/320 (27.50%), Postives = 145/320 (45.31%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLKGT-HPALTTDCWTSTSGTPFMAVTAHWIPED--KPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTCHLLQLCALKILNEPHVKATFAKHNRLTGHLHS-----------SSAATEKLHALQKAAEL----------------PERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDFIT--NSMMPMLASTLH 870
            P + VE  SF + L V   D+      R  ++ K  ++ +E   KL+  L  T H ++T D W+      F+ VT HW+ +D  + +L +  L C+ F+GSHTA+R+ D+   +  ++ IK T   + +D AAN++KA       E           C L + ++  V A  AK  RL    H+           +      L  L K + L                 ++ IP +  TRWNS   Q   VL       +LCA L+  +  DL ++  +W     +V++LKPF  AT++ QG+ +   ++++P + S  H
Sbjct:   61 PLSFVEKKSFRHFLSVL--DSKYSPVCRRTLTAKTESLTEERRLKLKTQLSITDHVSVTVDIWSDRKKRGFLGVTVHWVEKDAERIQLKTNLLACNRFKGSHTAERICDQFEAICDEYDIKATLDYIISDNAANMRKAFTVCFPSEQEDDGDDPELWCDLTLEDQQTVDAAMAKKQRLQCFAHALQLVVGDGLKETKVVCPSLSKLSKLSSLLHTSTTFKDLFDDEFGEQKGIPAAVKTRWNSTLRQVKAVLQCDHL--KLCAVLEKARHKDLSFSPREWNLLKELVDILKPFGEATDLTQGEKVITISAVVPSVLSLNH 376          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A6G0IQH5_LARCR (ATP-dependent DNA helicase n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IQH5_LARCR)

HSP 1 Score: 116 bits (291), Expect = 2.510e-24
Identity = 83/279 (29.75%), Postives = 125/279 (44.80%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLK-GTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCTC--HLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAELPERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLD---LVYTEDDWANTDAVVEVLKPFCNATEVMQGD 825
            P N V+   F++L  +A  +     PSR  V+++V A  ++ + +L+  L   T  ALTTDCWT+ +   ++ VT H+    K EL S  LT +     HTA  LA+++N+++  +G+     A   D A NI  A     R  W    C  H L L          +        RL  H H S+ AT+ L   Q+   LP   +  SC TRWNS  +   R++  R+ V  + +     K  D   L   +D W   + +  VL     AT VM  +
Sbjct:   50 PINTVDGAGFQDL--IAFIEPGYKIPSRPSVTSRVEARFEKKKSELKTKLATATGVALTTDCWTALTTESYITVTCHYF-NAKWELKSAVLTTTSMSDRHTADNLAEKLNDIVETWGLSGRVTACVHDNARNIVLANNP-TRVSWKSVACYAHTLNLAVNDGFAAAGISRAIVAAGRLVKHFHHSTIATKALEEKQEQMSLPPHRLIQSCKTRWNSVCDMFDRLVEQRWAVSAVLSDRSVTKLADARTLELRDDYWQLMEDIAPVLGTLKCATTVMSAE 324          
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Match: A0A3Q3IBN3_MONAL (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3IBN3_MONAL)

HSP 1 Score: 114 bits (285), Expect = 7.820e-24
Identity = 93/331 (28.10%), Postives = 150/331 (45.32%), Query Frame = 1
Query:    7 PFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRDMLKGT-HPALTTDCWTSTSGTPFMAVTAHWIPED--KPELVSTTLTCSEFRGSHTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKA---------------GKQFLRPE-WHG--------------------CTCHLLQLCALKILNEPHVKA-TFAKHNRLTGHLHSSSAATEKLHALQKAAELPE-RTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTEDDWANTDAVVEVLKPFCNATEVMQGDFIT--NSMMPMLASTLH 870
            P ++VE  SF + L V   D+      R  +++K   +A E    L+  L  T H ++T D W+      F+ VT HWI +D  + +L S  L C  F+GSHT  R+ ++   +  ++ IK+    + +D AAN++KA               G     PE WH                     C  H LQL     L E  V +   +K ++L+  LH+S+   +   A     E  E ++IP    TRWNS   Q   +L  +F     CA L+     +L +T  +W     +V++LKPF  AT+++QG+ +   ++++P + S  H
Sbjct:   61 PLSIVENKSFRHFLTVV--DSKYSPVCRKTMTSKTEKLAAERRLILKTQLSNTDHVSVTVDIWSDRKMRGFLGVTVHWIEKDMERIQLKSKLLGCDRFKGSHTGDRICEQFEAICDEYNIKEKLDFIISDNAANMRKAFTVCFPTQDEVHDDDGDHLDDPELWHDLSLEEQETLDAAMAKKQRLQCFAHTLQLVVRDGLKETKVASPALSKLSKLSSLLHTSTTFKDAFEA-----EFGEQKSIPAVTNTRWNSTMRQVKALL--QFDHPNFCAVLEKAGHKELSFTAREWNLLKEMVDILKPFGEATDMIQGEKVVTISAVVPSVLSLNH 382          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17100.5046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y2HFD6_ARAVE8.630e-2933.45Zinc finger BED domain-containing protein 1 n=3 Ta... [more]
A0A4Y2QK48_ARAVE9.750e-2933.11Zinc finger BED domain-containing protein 1 n=2 Ta... [more]
A0A671V861_SPAAU2.890e-2830.94BED-type domain-containing protein n=1 Tax=Sparus ... [more]
A0A1A8V609_NOTFU4.480e-2731.65Zinc finger BED domain-containing protein 1-like n... [more]
UPI001CD05EF03.080e-2527.81E3 SUMO-protein ligase ZBED1-like n=1 Tax=Drosophi... [more]
A0A0F8ASK1_LARCR1.270e-2429.75Zinc finger BED domain-containing protein 1 n=2 Ta... [more]
A0A3B3WT67_9TELE2.020e-2429.00Uncharacterized protein n=1 Tax=Poecilia mexicana ... [more]
A0A553QHN2_9TELE2.430e-2427.50Uncharacterized protein n=1 Tax=Danionella translu... [more]
A0A6G0IQH5_LARCR2.510e-2429.75ATP-dependent DNA helicase n=1 Tax=Larimichthys cr... [more]
A0A3Q3IBN3_MONAL7.820e-2428.10Dimer_Tnp_hAT domain-containing protein n=2 Tax=Mo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17100contigEcto-sp13_S_contig17100:612..2614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop1
Start0
Seed ortholog score127.1
Seed ortholog evalue1.5e-26
Seed eggNOG ortholog7370.XP_005189770.1
Model size1246
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.Protein of unknown function (DUF 659)
EggNOG OGs39TTD@33154,3BCXB@33208,3CYBV@33213,3SUYM@50557,425F3@6656,456H2@7147,KOG1121@1,KOG1121@2759
Cds size987
COG Functional cat.L
Best tax levelDiptera
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462895.1010706-UTR-Ecto-sp13_S_contig17100:611..8701681462895.1010706-UTR-Ecto-sp13_S_contig17100:611..870Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17100 612..870 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462895.112298-CDS-Ecto-sp13_S_contig17100:870..12691681462895.112298-CDS-Ecto-sp13_S_contig17100:870..1269Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17100 871..1269 -
1681462895.1224244-CDS-Ecto-sp13_S_contig17100:1607..19881681462895.1224244-CDS-Ecto-sp13_S_contig17100:1607..1988Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17100 1608..1988 -
1681462895.1322138-CDS-Ecto-sp13_S_contig17100:2407..26141681462895.1322138-CDS-Ecto-sp13_S_contig17100:2407..2614Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17100 2408..2614 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17100.5046.1prot_Ecto-sp13_S_contig17100.5046.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17100 871..2614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17100.5046.1

>prot_Ecto-sp13_S_contig17100.5046.1 ID=prot_Ecto-sp13_S_contig17100.5046.1|Name=mRNA_Ecto-sp13_S_contig17100.5046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=329bp
QQPFNVVEAPSFENLLRVAANDASLGAPSRHDVSTKVSAMAKEAEGKLRD
MLKGTHPALTTDCWTSTSGTPFMAVTAHWIPEDKPELVSTTLTCSEFRGS
HTAQRLADRINEVMSQFGIKDTTVALTTDTAANIKKAGKQFLRPEWHGCT
CHLLQLCALKILNEPHVKATFAKHNRLTGHLHSSSAATEKLHALQKAAEL
PERTIPTSCPTRWNSAYEQGLRVLNNRFCVQQLCARLKTEKKLDLVYTED
DWANTDAVVEVLKPFCNATEVMQGDFITNSMMPMLASTLHVFCITKAAKL
KFRSTSGRWRTRCSKTSRTASTPRVIVR*
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mRNA from alignment at Ecto-sp13_S_contig17100:612..2614-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17100.5046.1 ID=mRNA_Ecto-sp13_S_contig17100.5046.1|Name=mRNA_Ecto-sp13_S_contig17100.5046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2003bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17100:612..2614- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCAGCCGTTCAACGTTGTCGAGGCGCCCTCTTTCGAGAACCTGCTTCG AGTTGCCGCCAACGACGCCAGCCTTGGGGCGCCTTCTCGCCACGACGTTT CGACGAAGGTCTCCGCCATGGCGAAGGAGGCGGAGGGGAAGCTGCGAGAC ATGTTGAAGGGGACACACCCGGCCCTCACGACGGACTGCTGGACCTCCAC CAGCGGGGTAAGTCGTGCGGCTGGTAATTGCCCTTCTTTCTTATTTTGTT CGCGTGCCTTTGACTTCACCCAAGCCAAGCAATACGCAAACCCATGCACG TAGCATGTAGCCAGATGCAAAACTAAGGAGGGTATGGGGGTATACATCAA TGCGGGTTGGAAAAAAACACCAGGGTACAAGGGTTCACGTTTGTTTTGAT TTTTGCCTTCTTTTATCGGTTGCATTTTCAGGTGTTCAGGTGTGTGTTTT CTTTCGTTTTTCCCGGTGCATGTTCAGGTTTTCAAAGCAAACGGACGTCC CCTCTCCTCCCGCCTGTTCCCCTGCCTACGAGAAAAATCCTGATCCTCGT AGCACGAACGCTCCCTTCGAAACCCTCGTACCGTTGTACATGTCTGCTTG TCGGCCTGCAACTCTCCGTCTTACAGACTCCATTCATGGCCGTGACGGCG CACTGGATCCCTGAGGACAAGCCTGAGCTCGTGTCGACCACCCTCACGTG CTCCGAGTTCAGGGGAAGCCACACCGCCCAGCGCCTCGCCGACAGGATCA ACGAGGTGATGAGCCAGTTCGGCATCAAGGACACCACCGTGGCCTTGACG ACAGACACTGCGGCCAACATCAAGAAGGCTGGCAAGCAGTTTCTTCGCCC GGAGTGGCATGGTTGCACATGCCACCTGCTTCAGCTTTGCGCCCTCAAGA TCCTCAACGAGCCGCACGTCAAGGCCACCTTCGCTAAGCACAACAGGCTG ACCGGTCACCTCCACTCGTCCTCGGCGGCGACGGAGAAGCTGCACGCGCT CCAAAAGGTACAGGACGGTGGTATTTGTTGGTATGTATGTGAACGCCAAA CTGTATGAACTGCTTGATACTTGGAAGACTTCAAGTGAAGAGGCGCATCA AATTGTTTTTAGGGACACCGTGGAATACAGCTTTTTTTCGGGAGTGCCGC CAACAGTCCACCACCGTGACAGATGTTTGCCGCAACGTGCTGTGTAGCTA GTGGCAGAGGAAGGTCCATGTGTGGCACACGTGCTATCATCCATGTTTCG TTGCATCTTATTCTCATTTTTGCATCGTTTGCCGTTTGCCCCTTTGCATT GTTTACTCTTCCATGTTCCCGTTCTTTTTTTTTTTCTAAATACAGGCGGC CGAATTGCCTGAGAGGACCATCCCCACGAGCTGCCCGACTCGCTGGAACT CCGCCTACGAGCAGGGGCTCCGAGTCCTGAACAACAGGTTTTGCGTTCAG CAGCTGTGCGCCAGGCTCAAGACGGAGAAGAAGCTCGACCTTGTGTACAC CGAGGACGACTGGGCGAACACGGACGCCGTCGTCGAGGTCCTGAAGCCCT TCTGCAATGCGACGGAGGTCATGCAGGGGGACTTCATCACCAACAGCATG ATGCCGATGCTGGCGTCCACCCTGCACGTCTTCTGCATCACCAAGGCTGC CAAGTTGAAGTTCCGGAGCACATCAGGAAGGTGGCGGACAAGATGTTCGA AGACGTCGAGGACCGCTTCTACCCCCCGAGTGATTGTGCGATGATCGCCG CGGTATGCGACCCTCGCGTCAAGAAGCTGTCGTGGTGCGACAAGTTGGAG AAGAGGAAGTACCGCGACCTCACGGTCAACGCCATGGTCACTGCCATACC TGACGTGCATGAGAAGGGCAACGTGCCCGCGACCGGCGTCTCCGACCAGC CGGAGACCGGCGCCTCCGACCAGCCGGAGACCGGCGCCTCCGACCAGCCG GAGACCGGCGCCTCCGACCAGCCCGCCAGCACGGACCTCCGCAGGAAGAA GCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17100:612..2614-

>mRNA_Ecto-sp13_S_contig17100.5046.1 ID=mRNA_Ecto-sp13_S_contig17100.5046.1|Name=mRNA_Ecto-sp13_S_contig17100.5046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=987bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17100:612..2614- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCAGCCGTTCAACGTTGTCGAGGCGCCCTCTTTCGAGAACCTGCTTCG
AGTTGCCGCCAACGACGCCAGCCTTGGGGCGCCTTCTCGCCACGACGTTT
CGACGAAGGTCTCCGCCATGGCGAAGGAGGCGGAGGGGAAGCTGCGAGAC
ATGTTGAAGGGGACACACCCGGCCCTCACGACGGACTGCTGGACCTCCAC
CAGCGGGACTCCATTCATGGCCGTGACGGCGCACTGGATCCCTGAGGACA
AGCCTGAGCTCGTGTCGACCACCCTCACGTGCTCCGAGTTCAGGGGAAGC
CACACCGCCCAGCGCCTCGCCGACAGGATCAACGAGGTGATGAGCCAGTT
CGGCATCAAGGACACCACCGTGGCCTTGACGACAGACACTGCGGCCAACA
TCAAGAAGGCTGGCAAGCAGTTTCTTCGCCCGGAGTGGCATGGTTGCACA
TGCCACCTGCTTCAGCTTTGCGCCCTCAAGATCCTCAACGAGCCGCACGT
CAAGGCCACCTTCGCTAAGCACAACAGGCTGACCGGTCACCTCCACTCGT
CCTCGGCGGCGACGGAGAAGCTGCACGCGCTCCAAAAGGCGGCCGAATTG
CCTGAGAGGACCATCCCCACGAGCTGCCCGACTCGCTGGAACTCCGCCTA
CGAGCAGGGGCTCCGAGTCCTGAACAACAGGTTTTGCGTTCAGCAGCTGT
GCGCCAGGCTCAAGACGGAGAAGAAGCTCGACCTTGTGTACACCGAGGAC
GACTGGGCGAACACGGACGCCGTCGTCGAGGTCCTGAAGCCCTTCTGCAA
TGCGACGGAGGTCATGCAGGGGGACTTCATCACCAACAGCATGATGCCGA
TGCTGGCGTCCACCCTGCACGTCTTCTGCATCACCAAGGCTGCCAAGTTG
AAGTTCCGGAGCACATCAGGAAGGTGGCGGACAAGATGTTCGAAGACGTC
GAGGACCGCTTCTACCCCCCGAGTGATTGTGCGATGA
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