mRNA_Ecto-sp13_S_contig1710.5044.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: D7G632_ECTSI (Cyclin B1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G632_ECTSI) HSP 1 Score: 611 bits (1575), Expect = 1.710e-213 Identity = 300/303 (99.01%), Postives = 302/303 (99.67%), Query Frame = 1
Query: 817 SLIAETAAREARLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDELPTLPRKPNIASN 1725
SLIAE AAREARLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLM+KFLLDEPVTASQRHLVAVKKKFLGERFLAVAID+LPTLPRKPNIASN
Sbjct: 188 SLIAEAAAREARLKRCKVPPSEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDDLPTLPRKPNIASN 490
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A836CA68_9STRA (Cyclin, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA68_9STRA) HSP 1 Score: 333 bits (855), Expect = 4.170e-108 Identity = 162/255 (63.53%), Postives = 199/255 (78.04%), Query Frame = 1
Query: 946 MYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDELPTLPRKP 1710
MY RY +LE Y PTVYMH Q DIN KMR+ILIDWIVEVH KFKLA PTLYLTC+IIDR+CM E V R KLQLVGVTALL+ACKYEEI+P EVRDCVYITD+ YTRE++LEME ++RRL+++LTVPT WTFL R L++A+AT+ Q RA YY ER LQEH+ L+FRPS++AA + +L+R+ D +AWP L +FC + L CA +M FL EPVTA+ RHLVA K+KFL ++FL+V+I+ELP LP P
Sbjct: 1 MYSRYVDLEAMYAPTVYMHMQEDINEKMRSILIDWIVEVHFKFKLATPTLYLTCNIIDRYCMVEAVTRDKLQLVGVTALLVACKYEEIWPPEVRDCVYITDNTYTREQMLEMEMAMVRRLRYQLTVPTAWTFLARVLRVARATETQFQRACYYSERMLQEHDMLAFRPSLVAATATYLSRLVDIEDAHAWPPVLEEFCGLSVDMLMPCAHMMRSFLEAEPVTANHRHLVAAKRKFLQDKFLSVSIEELPQLPSPP 255
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A7S2GN01_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN01_9STRA) HSP 1 Score: 278 bits (712), Expect = 3.010e-84 Identity = 143/275 (52.00%), Postives = 188/275 (68.36%), Query Frame = 1
Query: 880 EVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQ--HHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDELPTL 1698
EV D DRD+P+A EY ++Y YK+ E+ P +YMH Q DI +MR+ILIDW+VEVHLKFKL TLYL H+ID+FC +V R +LQLVG+TALLIACKYEEI+P EVRDCVYITDHAYTREEVL ME +L+ ++ +TVPT + FL+R+LK+ T ++ RA YY ER LQEH+ L ++PS++AAASV+LA S + W + K+ E + CAR + ++ + PVT S+R L AVKKKF ++FL VA D P +
Sbjct: 168 EVQHCDEADRDNPLAVVEYIEELYHYYKKAEQIKAPAMYMHRQSDITPRMRSILIDWLVEVHLKFKLVPATLYLCVHLIDQFCSSNDVLRGRLQLVGITALLIACKYEEIYPPEVRDCVYITDHAYTREEVLSMETEMLQHFEYNITVPTGYQFLIRYLKVMGCTPKEAASFRASYYAERSLQEHDMLLYKPSLVAAASVYLAL--KSERPDPWGRVIEKYSGYSLEQITPCARQICHYIRENPVTPSRRPLTAVKKKFETQKFLRVAEDPDPVI 440
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A6U6KAA6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KAA6_9STRA) HSP 1 Score: 268 bits (684), Expect = 3.500e-79 Identity = 140/282 (49.65%), Postives = 190/282 (67.38%), Query Frame = 1
Query: 883 VSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLAR----IPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDELPTLPRKPNI 1716
++ HD DR + + A Y D+++ + + E K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY R+EVL+MEQ IL+RL+F++TVPT + FL+RFL + KA+ A YY+ER LQEH+ L F+PS++AA++V LA I D P L ++ L CA ++ + +EPVTAS+R LVAVK+K+ ++ V+ T R+PN+
Sbjct: 229 IAPHDTNDRGNTLQVAPYVTDIFQHFFQAEAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS-----TTVRQPNV 505
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A7S2XS29_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS29_9STRA) HSP 1 Score: 266 bits (680), Expect = 4.810e-79 Identity = 140/278 (50.36%), Postives = 191/278 (68.71%), Query Frame = 1
Query: 877 SEVSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARIPDS-----GIKN----AWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAID 1683
SE++ HD+ ++DD + EY D+++ +E K P YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C N+ RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY R+EVL+MEQ IL RL+F++TVPT + FL RFL + KA+ AQYY ER LQE++ L FRPS++ AA+V LA + GI+N + L ++ + CA ++ + + +EPVTAS+R LVAVK+K+ ++++ V+I+
Sbjct: 187 SEIAPHDIHNKDDVLEVTEYVTDIFQYLYHVEAKSWPRGYMEKQQDINAKMRAILVDWLVEVHMKFRLNPETLYLCINIIDRYCNLVNIARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYQRQEVLDMEQDILNRLRFKITVPTPYPFLQRFLTLTKASQLTRFAAQYYTERTLQEYDVLKFRPSLVCAAAVILALNNPAIAIKEGIRNYECPGLDNILLEYTGFAEADILECAAVIARKVGEEPVTASRRQLVAVKRKYDNKKYMNVSIE 464
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A7R9W0K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0K7_9STRA) HSP 1 Score: 261 bits (668), Expect = 5.630e-78 Identity = 133/268 (49.63%), Postives = 183/268 (68.28%), Query Frame = 1
Query: 892 HDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLAR----IPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAID 1683
HD D+D+ + A Y D+++ + E + +P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C V RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY R+EVL+MEQ +L+RL+F++TVPT + FL RFL +AK++ A YY ER LQEH+ L F+PS++A ++V LA I + G P L ++ R + CA L+ + +EP+TAS+R LVAVK+K+ ++ V++
Sbjct: 137 HDADDKDNILQVAPYVTDIFQHFYRAEARSSPEMYMDHQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSLVTVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLNMAKSSQLARIAANYYTERTLQEHDLLRFKPSVVAVSAVILALNNPDICEDGDCPGMPKILVEYTGFERSEIIACASLIATKVGEEPITASRRQLVAVKRKYDHRKYQHVSVS 404
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A7S1ZPT4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPT4_TRICV) HSP 1 Score: 262 bits (669), Expect = 2.120e-77 Identity = 135/271 (49.82%), Postives = 183/271 (67.53%), Query Frame = 1
Query: 883 VSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLARI-PD-----SGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVA 1677
++ HD D+++ + Y D+++ E + P +YMH Q DIN KMRAIL+DW+VEVH+KF L TLYL +IIDR+C Q +V RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY R+EVL+MEQ +L+RL+F++TVPT + FL RFL + KA A YY+ER LQEH+ L ++PS++AA+ V LA PD + P L ++ + L CA+L+ + ++PVTAS+R LVAVK+K+ +F V+
Sbjct: 188 IAPHDACDKENVLKVVPYVTDIFQHLYRAEARSCPEIYMHNQADINAKMRAILVDWLVEVHMKFHLVPETLYLCINIIDRYCSQVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDMLQRLRFKITVPTAYPFLQRFLSLTKAPQLAQFAANYYMERTLQEHDLLQYKPSVVAASCVILALSNPDIPADTETLNPGMPRILLEYTGFEEKVLLSCAKLIATKVGEDPVTASKRQLVAVKRKYGHGKFRHVS 458
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A6V2B684_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B684_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.970e-76 Identity = 136/274 (49.64%), Postives = 187/274 (68.25%), Query Frame = 1
Query: 883 VSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLA-RIPDSGIKNAW--------PDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVA 1677
+++HD D D+P+ ++Y D+++ E + P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL +IIDR+C Q V RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY ++EVL+MEQ +L RL+F++TVPT + F++RFL I KA+ + A YY+ER LQEH+ L RPS++ AASV LA PD K + P L ++ + + CA ++ + + +EPVTAS+R LVAVK+K+ ++ V+
Sbjct: 246 IAKHDEDDADEPLLVSDYVTDIFQHLFNAETRSRPRMYMDKQRDINAKMRAILVDWLVEVHMKFRLVPETLYLCVNIIDRYCNQVPVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYHKQEVLDMEQDMLHRLRFKITVPTAYPFILRFLNITKASSVARYAAHYYMERTLQEHDLLLHRPSLVCAASVVLALNNPDIIAKESTSNRERPGVPKILLEYTGFSKSDILECAAVIARKVGEEPVTASRRQLVAVKRKYDNRKYFHVS 519
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A6U6K965_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K965_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.960e-75 Identity = 132/253 (52.17%), Postives = 174/253 (68.77%), Query Frame = 1
Query: 970 EEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLAR----IPDSGIKNAWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAIDELPTLPRKPNI 1716
+ K P +YM Q DIN KMRAIL+DW+VEVH+KF+L TLYL ++IDR+C +V RSKLQLVGVTALLIACKYEEI+P EVRDCVYITD AY R+EVL+MEQ IL+RL+F++TVPT + FL+RFL + KA+ A YY+ER LQEH+ L F+PS++AA++V LA I D P L ++ L CA ++ + +EPVTAS+R LVAVK+K+ ++ V+ T R+PN+
Sbjct: 17 QAKSCPEMYMDQQADINAKMRAILVDWLVEVHMKFRLVPDTLYLCINLIDRYCSHVSVARSKLQLVGVTALLIACKYEEIYPPEVRDCVYITDRAYNRQEVLDMEQDILQRLRFKITVPTAYPFLLRFLNMTKASQLSRIAANYYMERTLQEHDLLKFKPSVVAASAVVLALNNPDISDDHDCPGMPTVLMEYTGFQPSELMACAAIIATKVGEEPVTASRRQLVAVKRKYDHRKYQHVS-----TTVRQPNV 264
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Match: A0A7S2PQG9_9STRA (G2/mitotic-specific cyclin-B3 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQG9_9STRA) HSP 1 Score: 253 bits (646), Expect = 7.130e-74 Identity = 135/282 (47.87%), Postives = 186/282 (65.96%), Query Frame = 1
Query: 883 VSEHDVVDRDDPIACAEYAMDMYKRYKELEEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRLKFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLA-RIPDSGIKN--------AWPDALAKFCNTPREGLECCARLMVKFLLDEPVTASQRHLVAVKKKFLGERFLAVAID-ELPTL 1698
++ +D R DP AEY D+++ + E +Y YM Q DIN +MRAILIDW+VEVH+KF+L TLYL IIDR+C + +V RSKLQL+GVTALL+ACK+EEI+P EVRDCVYITD AY R+EVL+MEQ IL+ L ++++VPT + FL RFL ++ A++ H A YYLER LQEH L FRPS++ A++V LA PD ++ +P L ++ L C M + + +EP+TAS+R L AVKKK+ ++L V+ + ELP +
Sbjct: 205 IAHYDAARRSDPQKVAEYITDLFQHLYKAETRYKVAPYMFRQEDINARMRAILIDWLVEVHMKFRLVPETLYLCVSIIDRYCCKVDVLRSKLQLIGVTALLVACKHEEIYPPEVRDCVYITDRAYNRQEVLDMEQEILKVLDWKISVPTAFPFLDRFLCLSDASEMTKHAAAYYLERTLQEHSFLQFRPSVVCASAVILALNNPDIRVQEEDLDRELPGFPKILMEYTGFSEFELTTCMERMAEKVGEEPITASRRQLNAVKKKYENSKYLEVSTNVELPNV 486 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1710.5044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1710.5044.1 >prot_Ecto-sp13_S_contig1710.5044.1 ID=prot_Ecto-sp13_S_contig1710.5044.1|Name=mRNA_Ecto-sp13_S_contig1710.5044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=487bp MARSSGRGKAATTSGGGGSSSNSSSTSKDAAEAAPRKMRLRRRPALADISback to top mRNA from alignment at Ecto-sp13_S_contig1710:5671..10053- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1710.5044.1 ID=mRNA_Ecto-sp13_S_contig1710.5044.1|Name=mRNA_Ecto-sp13_S_contig1710.5044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4383bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1710:5671..10053- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1710:5671..10053- >mRNA_Ecto-sp13_S_contig1710.5044.1 ID=mRNA_Ecto-sp13_S_contig1710.5044.1|Name=mRNA_Ecto-sp13_S_contig1710.5044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1461bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1710:5671..10053- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |