mRNA_Ecto-sp13_S_contig17091.5037.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5L703_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L703_9PHAE) HSP 1 Score: 415 bits (1066), Expect = 4.520e-135 Identity = 216/273 (79.12%), Postives = 221/273 (80.95%), Query Frame = 2
Query: 74 MVLSASSREGLTKLVTLRDQQELSTSQLGDIKEHLLNNEPLSHDFWKGIEELRSLRSSSDIPMLEEHVQHLNEHVASLLKKKTPVPTPPELADGSSAQQFVGQKRKA*SSSTASAQKKGRAASNPPAGTHNIINASAKGSGKPVVRTRGDGSTEEITSINFAAPPPPQPTVHCTKCNRRFFNTQGLGVHIKTDHEREAKISVQRWCSTNRKGAGASSLLPWGGTPSGRCWHVAFHHGESRGCGATCPSGSVTFVL*PLRPGAERNNNLVIDGF 892
MVLSASSREGLTKLVTLRDQQEL TSQLGDIK+HLLNNE LSHD W+GIEELRSLRSS DI LEEHVQHLNEHVAS LKKK P GRAASNPP GTHNI NA AKGS KPVVRTRGDG TEEIT+INFAAPPPPQPTV CTKCNRRFFNT+GLGVHIKTDHEREAKISVQRWCSTNRKGAGASSLLPWGGTPSGRCWHVAFHHGESRGCGATCP GSV+FVL PLRPGAERNNNLV GF
Sbjct: 1 MVLSASSREGLTKLVTLRDQQELWTSQLGDIKKHLLNNESLSHDCWEGIEELRSLRSS-DILTLEEHVQHLNEHVASHLKKKAPASXXXXXXXXXX----------------------GRAASNPPVGTHNITNAFAKGSDKPVVRTRGDGRTEEITNINFAAPPPPQPTVPCTKCNRRFFNTRGLGVHIKTDHEREAKISVQRWCSTNRKGAGASSLLPWGGTPSGRCWHVAFHHGESRGCGATCPPGSVSFVLQPLRPGAERNNNLVNGGF 250
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 454 bits (1167), Expect = 1.400e-133 Identity = 360/938 (38.38%), Postives = 469/938 (50.00%), Query Frame = 2
Query: 113 LVTLRDQQELSTSQLGDIKEHLLNNEPLSHDFWKGIEELRSLRSSSDIPMLEEHVQHLNEHVASLLKKKTPVPTPPELADGSSAQQFVGQKRKA*SSSTASAQKKGRA-ASNPPAGTHNIINASAKGSGKPVVRTRGDGSTEEITSINFAAPPPPQPTVHCTKCNRRFFNTQGLGVHIKTDHEREAKISVQRWCSTNRKGAGASSLLPWGGTPSGRCWHVAFHHGESRGCGATCPSGSVTFVL*PLRPGAERNNNLVIDGFHK-RSRHQRQRVEQPRGDGTPRARRSVSLGAARSRVAVNGGSCALRYDPSLLLGT*VRDLSQQYQQMAEG*RLSRAAGS*QGAE*SDSDMHSTAAVVP*RGEGAVQDVAGTT-------QEEAAGLDKVDHGHFQK-AYHGNVPARSTSKGIPAVLPVRAKVGDETLAV*AAAV*LQEQV------CGGETAENPEMAQGVPKAPATASCTWREGHPVGATSTCLGRRIRRATKGADPLRRTLRQVGALREGAEGQHRPGTVGVRERTGRHLGQKRGEAGACWPAIPRLG------EAAVHGATDDRSRREKDEVRDHLPRQRNRYHQGGEGSIRQARRCLLPAQGLGRQRLLHAMAGALFSPEPNGRREGARGAAASSRRQPAWADD*GIRKYLHKECNTLLWHLPAGCTDEVQPIDAGYGRRLKVAVGVQLDKWLESGDNLQKWEAKALTCSERRVLLTSWVAQATEEVDKDEQCRFRLFEKTGCGMTADGSGDDKINLEGLS-TYSFMDVQDGAGTDEE--------------GKKDGDTG-NVGVDQLSE-DASSSXXXXXXXXXXXXDPLTQLHEDDELSPEEETLKMDIPDGFRLQASPPPALDQSIVQRGVLVKLGLGWFGEVISRRSHPASRQEYDYRVILHCDESTRSMKMPLESYSTDGDAAIGAWV 2809
L+ ++DQ L+ Q+ DIK+HLL+ + L F+ I LR+ R+ D+ EH LN+H+ + +KK T + P GSS++ G KRKA SS ++KGRA A+ AGT NI+NA + +G+P+VRTR DGSTE I I F PPP P V C KC+R FFN QGLGVH+KTDH+ + +I V RWCST SS LPW G PSGRCW V FHH S G P GS R V++ + SR Q R + TP S G A + ++ + + LL + + ++ SR AE + M+ R V ++ A + + QK A+ ++ R S G + K +E L A + ++ CGGE P+ A W P +T + T + + Q GA R Q PG + R+ T + G+ C G E A + D + K D+ ++ RC P+ L+ A G + + + G RKYL+KECNTLLW LPAGCTDE+QP+DAG GRR+K +G QLD WLE GDNLQ+WE +LT SERRVLLT WVA+ E+++ D+Q R RLFEKTG GMTADGSGD++INLEG+S +FMD G + E G+ GD G +G D SE DASS DPLTQLH+DD+L EE+L+MDIPDGF+LQASPP ALDQS+V+RGVLVKLGLGWFG VISRR+HPASR EYDYRV+LH D STRSMK+PLESYSTD DA +G+WV
Sbjct: 1107 LLAIKDQ--LTGGQVSDIKQHLLDKKTLPSTFFSDIASLRNQRAH-DLLSETEHSTLLNDHINAHVKK-TQMAAPAGSTGGSSSE-LTGVKRKAASSGP---KRKGRARAAAGIAGTPNIVNAFVRATGEPMVRTRKDGSTENIMDITFPDPPPLTPKVPCPKCHRLFFNNQGLGVHVKTDHKDDVRIGVTRWCSTASAVVDPSSTLPWSGVPSGRCWRVKFHHQAS---GLASPRGSYD----------PREKLSVVEQLRELESRAQEVRAH---FNLTPLGYLSNKTGIAVANIS------KWQREEEKLLEVAAKSVKKKLFDTK-----SRPKRWFPEAEQALYTMYRERRKKKVRVSTRWLTVTFRKLLAEKYPEDPRAKTFRASYRWAQKWAHRHSLSMRRKSNG-------KNKSSEERLPKINAWLKRYRELLREPRRCGGELVPWPQQVPQEASGDLQAHHKWGRFLPDERLNT-----DQVPTGFVNGQVDSWEQTGARRVHIM-QPFPG-LEKRQCTVQPTFGPGGKVMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNF-------------CMQWLERCFRPS-------LMAASGGKVPDAQTVLLADNLHGQTTEK-----------FRKYLYKECNTLLWLLPAGCTDELQPVDAGMGRRMKTGMGRQLDSWLEHGDNLQQWEDGSLTASERRVLLTQWVAEVIEKINADQQYRSRLFEKTGTGMTADGSGDERINLEGVSGPLNFMDADVGGSSGEXXXXXXXXXXNPGEGGRGGGDLGLQLGGDSESEEDASSCDESDGDDEKQSEDPLTQLHDDDQLCAGEESLEMDIPDGFQLQASPPSALDQSLVKRGVLVKLGLGWFGGVISRRAHPASRDEYDYRVVLHSDGSTRSMKLPLESYSTDEDAGVGSWV 1964
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5JD00_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD00_9PHAE) HSP 1 Score: 350 bits (899), Expect = 6.020e-110 Identity = 196/315 (62.22%), Postives = 207/315 (65.71%), Query Frame = 3
Query: 1593 FVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSFRPSRMVDGKVPEEQPLLLADNLHGQTTEEFVSISIRSATRFF----GTCRQAVRT------RSSRSTPAMDGD*RWL*GCSWTSGWRAET-TCKSGRPKH*RVPNVACCLPVGWHRRPRRSI-KMSNVGSVSSRKPDVE*RRMALGTTKSTSRAFPHIPSWMCRMAPALMRRARRMATLAMLAWTSCRRTPLPAMMRVTETMTTIRTR 2501
FVKELRDN DQVPLGFV+GQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPT GAGGKKTRCA IFRGKGTGITKVEKAAYDKR DVFFQPKAWADSDFCMQWLERSFRPSRMVDGKVPEEQ LLLADNLHGQTTEEF FF C V+ R + + D +WL W A+ TC R L W + I K K G STSRAFPHIPSWM R+APALMRRARRM T A L WTSCR+TPLPA+ R ETMTT+R R
Sbjct: 11 FVKELRDNADQVPLGFVTGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTTGAGGKKTRCATIFRGKGTGITKVEKAAYDKRLDVFFQPKAWADSDFCMQWLERSFRPSRMVDGKVPEEQSLLLADNLHGQTTEEFRKYE--ECNTFFWHLPAGCTDEVQPIDAGYGRRLKVAVGVQLD-KWLESGDNLQKWEAKALTCSERR-----------LLLTSWVAQATEEIDKQEQYRIRLFEKTGCGMTADGSGDDNSTSRAFPHIPSWMWRVAPALMRRARRMGTPARLTWTSCRKTPLPALTRAMETMTTMRIR 311
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5KIC9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIC9_9PHAE) HSP 1 Score: 332 bits (850), Expect = 1.220e-104 Identity = 166/184 (90.22%), Postives = 170/184 (92.39%), Query Frame = 3
Query: 1209 MLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNS---KNKSVEERLPKIRKWHREFQKLLQQPRVHGGKVIPWEPQAPVSDGGSVEQPRALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIG 1751
MLLARRKRKLRVSTRWITVTFKKLIME YPQ PRAKAFRP FRFAQKWAT+ S SKRRR + KNKSV ERLPKIRKWHREF+KLLQQPRVHGGKVIPWEPQAPVSD SVEQP ALIPYEGPYGKWGRFVKELRDNTDQVPLGFV+GQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIG
Sbjct: 1 MLLARRKRKLRVSTRWITVTFKKLIMERYPQDPRAKAFRPPFRFAQKWATKRSLSKRRRIQTWATKNKSVVERLPKIRKWHREFRKLLQQPRVHGGKVIPWEPQAPVSDERSVEQPGALIPYEGPYGKWGRFVKELRDNTDQVPLGFVTGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIG 184
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 317 bits (811), Expect = 4.000e-92 Identity = 172/344 (50.00%), Postives = 229/344 (66.57%), Query Frame = 3
Query: 978 ELRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWFPDAEKELYKMLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNSKNKSVEERLPKIRKWHREFQKLLQQP-RVHGGKVIPWEPQAPVSDGGSVEQPRALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSFRPSRMVD-GKVPEEQPLLLADNLHGQTTEEF 2003
+LR L+ + +V +TPL YLE + ++ S I KW +DE ++VQ AAD V+ +L+A +R WFP+ EK+LY LARR+RKL+VST W+TVTF+KL+ E +P+ RA AF SFR+A+KWA RH SKRRRSN KNKSVEERLPKI+++HR F+KLLQ+P R + + V++G S + K+G+F R N DQVPL FV+G TW+K GA RV + QPF GLEKRQCT+Q G G K R ++IFRG+G I+ VEKAAY K DVFFQ AWAD FCM+W +RS+R + G++P+ + +L+ DNLH QTT+EF
Sbjct: 110 QLRLLQEDAADVFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKR-WFPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDP------------KYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEF 440
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 315 bits (808), Expect = 9.090e-92 Identity = 171/344 (49.71%), Postives = 230/344 (66.86%), Query Frame = 3
Query: 978 ELRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWFPDAEKELYKMLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNSKNKSVEERLPKIRKWHREFQKLLQQP-RVHGGKVIPWEPQAPVSDGGSVEQPRALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSFRPSRMVD-GKVPEEQPLLLADNLHGQTTEEF 2003
+LR L+ + ++ +TPL YLE + ++ S I KW +DE ++VQ AAD V+ +L+A +R WFP+ EK+LY M LARR+RKL+VST W+TVTF+KL+ E +P+ RA AF SFR+A+KWA RH SKRRRSN KNKSVEERLPKI+++HR F+KLLQ+P R + + V++G S + K+G+F R N DQVPL FV+G TW+K GA RV + QPF GLEKRQCT+Q G G K R ++IFRG+G I+ VEKAAY K DVFFQ AWAD FCM+W +RS+R + G++P+ + +L+ DNL+ QTT+EF
Sbjct: 178 QLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKR-WFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDP------------KYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLYAQTTDEF 508
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 318 bits (814), Expect = 4.270e-90 Identity = 172/344 (50.00%), Postives = 230/344 (66.86%), Query Frame = 3
Query: 978 ELRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWFPDAEKELYKMLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNSKNKSVEERLPKIRKWHREFQKLLQQP-RVHGGKVIPWEPQAPVSDGGSVEQPRALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSFRPSRMVD-GKVPEEQPLLLADNLHGQTTEEF 2003
+LR L+ + ++ +TPL YLE + ++ S I KW +DE ++VQ AAD V+ +L+A +R WFP+ EK+LY M LARR+RKL+VST W+TVTF+KL+ E +P+ RA AF SFR+A+KWA RH SKRRRSN KNKSVEERLPKI+++HR F+KLLQ+P R + + V++G S + K+G+F R N DQVPL FV+G TW+K GA RV + QPF GLEKRQCT+Q G G K R ++IFRG+G I+ VEKAAY K DVFFQ AWAD FCM+W +RS+R + G++P+ + +L+ DNLH QTT+EF
Sbjct: 292 QLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKR-WFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDP------------KYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEF 622
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5JMI5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI5_9PHAE) HSP 1 Score: 296 bits (757), Expect = 2.450e-88 Identity = 139/149 (93.29%), Postives = 141/149 (94.63%), Query Frame = 2
Query: 446 PPAGTHNIINASAKGSGKPVVRTRGDGSTEEITSINFAAPPPPQPTVHCTKCNRRFFNTQGLGVHIKTDHEREAKISVQRWCSTNRKGAGASSLLPWGGTPSGRCWHVAFHHGESRGCGATCPSGSVTFVL*PLRPGAERNNNLVIDGF 892
PPAGTHNIINA AKGSGKPVVRTRGDGSTEEIT+INF APPPPQPTV CTKCNRRFFNTQGLGVHIKTDHEREAKIS+QRWCSTNRKGA ASSLLPWGGTPSGRC HVAFHHGESRGCGATCP GSVTFVL PLRPGAERNNNLV DGF
Sbjct: 32 PPAGTHNIINAFAKGSGKPVVRTRGDGSTEEITNINFTAPPPPQPTVPCTKCNRRFFNTQGLGVHIKTDHEREAKISLQRWCSTNRKGAEASSLLPWGGTPSGRCCHVAFHHGESRGCGATCPPGSVTFVLQPLRPGAERNNNLVNDGF 180
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE) HSP 1 Score: 303 bits (775), Expect = 3.520e-88 Identity = 166/343 (48.40%), Postives = 223/343 (65.01%), Query Frame = 3
Query: 981 LRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWFPDAEKELYKMLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNSKNKSVEERLPKIRKWHREFQKLLQQP-RVHGGKVIPWEPQAPVSDGGSVEQPRALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSFRPSRMVD-GKVPEEQPLLLADNLHGQTTEEF 2003
LR L+ + ++ +TP YLE + ++ S I KW +DE ++VQ AD V+ +L+A +R WFP+ EK+L + LARR+RKL+V T W+TVTF+KL+ E +P+ RA AF SFR+A+KWA RH SKRRRSN KNKSVEERLPKI+++HR F+KLLQ+P R + + V++G S + K+G+F R N DQVPL FV+G TW+K GA RV + QPF GLEKRQCT+Q G G K R +I RG+G I+ VEKAAY K DVFFQ AWAD FCM+W +RS+R + G++P+ + +L+ DNLH QTT+EF
Sbjct: 139 LRLLQEDAADLFKEEQLTPRQYLEDRLKVNYSLIVKWAQDEANIVQSEADDVKKTLLAKQQPKR-WFPEEEKKLCNIFLARRRRKLKVPTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDP------------KYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRILVILRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRGELPKARSILIMDNLHAQTTDEF 468
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Match: A0A6H5KVP8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP8_9PHAE) HSP 1 Score: 296 bits (759), Expect = 4.480e-88 Identity = 171/345 (49.57%), Postives = 215/345 (62.32%), Query Frame = 3
Query: 978 ELRDLESRSTEVRAHF-GMTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWFPDAEKELYKMLLARRKRKLRVSTRWITVTFKKLIMETYPQGPRAKAFRPSFRFAQKWATRHSPSKRRRSNSKNKSVEERLPKIRKWHREFQKLLQQPRVHGGKVIPWEPQAPVSDGGSVEQP-RALIPYEGPYGKWGRFVKELRDNTDQVPLGFVSGQEDTWDKRGAKRVHVGQPFPGLEKRQCTVQPTIGAGGKKTRCAIIFRGKGTGITKVEKAAYDKRADVFFQPKAWADSDFCMQWLERSF-RPSRMVDGKVPEEQPLLLADNLHGQTTEEF 2003
ELR+LE+ E H G++ +L K+GIS NI KW D + L+ AA+ +++ L T RR WF DAEK+L+ +LL RR RKLRVST WI V +KL++E YP PRAK F S R+ +K+A RH SKRRR+N KNKSVE+RLP++R + R ++LLQ+ V GG+ E A++P E P +G F N DQV L FV+G + TWD+ GA RV +GQPFPGLEKRQCTV IGAG K R A+IFRGKG ++ VEKAAYD DV FQ AW D CM W + SF R +G VPEEQ +L ADNLH QTT+EF
Sbjct: 61 ELRELEADDAEKIWHVHGVSCQQFLARKTGISQPNICKWNGDAEKLIAAAANDLKNDLFKTGRERR-WFGDAEKKLHSLLLQRRTRKLRVSTAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNKSVEDRLPQMRSFRRRLRQLLQELPVRRAAA-----------GGAAENNGAAIVPVESPL--YGGFSLNAHFNVDQVGLAFVNGPDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLMRTAVIFRGKGK-VSAVEKAAYDPGVDVLFQENAWMDGPMCMAWAKNSFLRSIEGEEGVVPEEQSILFADNLHAQTTDEF 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17091.5037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17091.5037.1 >prot_Ecto-sp13_S_contig17091.5037.1 ID=prot_Ecto-sp13_S_contig17091.5037.1|Name=mRNA_Ecto-sp13_S_contig17091.5037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp MTPLFYLEHKSGISASNISKWRKDEDSLVQQAADKVRSSLIATCTRRRLWback to top mRNA from alignment at Ecto-sp13_S_contig17091:71..3558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17091.5037.1 ID=mRNA_Ecto-sp13_S_contig17091.5037.1|Name=mRNA_Ecto-sp13_S_contig17091.5037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3488bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17091:71..3558+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17091:71..3558+ >mRNA_Ecto-sp13_S_contig17091.5037.1 ID=mRNA_Ecto-sp13_S_contig17091.5037.1|Name=mRNA_Ecto-sp13_S_contig17091.5037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17091:71..3558+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |