mRNA_Ecto-sp13_S_contig170.4989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: D7G6C9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C9_ECTSI) HSP 1 Score: 1139 bits (2945), Expect = 0.000e+0 Identity = 568/585 (97.09%), Postives = 573/585 (97.95%), Query Frame = 3
Query: 9 MSDSERRKKGCWLTDHAAIPVPPSKQDFILAGNLLKRRGGFGKMSHQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPARISDTSMRSPTFRLGTSKRLSSPPNGVKQRTRTPSPPSQNGTRSPSARATAVVTEESAQGGTDTRYAWTLACVLTAVDVVCYFLHQREFSLKVFYAAVFTLNLFIGWGMRRSADRPAYGERSGTGVPVIHGDDVGALRVALKRRFPLKKDTQPLLPLGDGRDIPCGVPVAGSTTQQYDGPAGTLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDNYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLACSTLHYPMMERAVEFDV 1763
MSDSERRKKGCWLTDHAAIPVPP+KQDFILAGNLLKRRGGFGKMS QKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISKNTPPDGD TGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGP RISDTSMRSPTFRLGTSK LSSPPNGVKQRTRTPSPPSQNGTRSPSARATAVVTEESAQGGTDTR AWTLACVLTAVDVVCY LHQREFSLKVFYAAVFTLNL IGWG+RRSADRPA GERSGTGVPVIHGDDVGALRVALKRRFP KKDT PLLPLGDGR+IPCGVPVAGSTTQQYDGPAG+LTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDT TKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKG+NYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGR ADELPESLLACSTLHYPMMERAVEFDV
Sbjct: 1 MSDSERRKKGCWLTDHAAIPVPPTKQDFILAGNLLKRRGGFGKMSQQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISKNTPPDGDFTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPTRISDTSMRSPTFRLGTSKSLSSPPNGVKQRTRTPSPPSQNGTRSPSARATAVVTEESAQGGTDTRGAWTLACVLTAVDVVCYLLHQREFSLKVFYAAVFTLNLIIGWGIRRSADRPASGERSGTGVPVIHGDDVGALRVALKRRFPPKKDT-PLLPLGDGREIPCGVPVAGSTTQQYDGPAGSLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTATKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGENYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRAADELPESLLACSTLHYPMMERAVEFDV 584
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A6H5JJA0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA0_9PHAE) HSP 1 Score: 822 bits (2123), Expect = 1.090e-295 Identity = 411/433 (94.92%), Postives = 419/433 (96.77%), Query Frame = 3
Query: 9 MSDSERRKKGCWLTDHAAIPVPPSKQDFILAGNLLKRRGGFGKMSHQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPARISDTSMRSPTFRLGTSKRLSSPPNGVKQRTRTPSPPSQNGTRSPSARATAVVTEESAQGGTDTRYAWTLACVLTAVDVVCYFLHQREFSLKVFYAAVFTLNLFIGWGMRRSADRPAYGERSGTGVPVIHGDDVGALRVALKRRFPLKKDTQPLLPLGDGRDIPCGVPVAGSTTQQYDGPAGTLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQ 1307
MSDSERRKKGCWLTDHAAIPVPP+KQDFILAGNLLKRRGGFGKMS QKWKNRCFVLLKTGNLCYFQAGSFDSV+FCEPPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFV+G PSS PARISDTSMRSPTFR GTSKRLSSPPNGVK +TRTPSPPSQNGTRSPSARATAVV EESAQGGT+TR AW LACVLTAVDVVCYFLHQ EFSLKVFYAAVFTLNL IGWGMRRSADRPA GERSGTGVPVIHGDDVGALRVALKRRFP KKDTQPLLPLGDGR+IPCGVPVAGSTTQQYD PAGTLTAPHHSWSNGI+SVFHVRGKGYMQDK+KVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQ
Sbjct: 1 MSDSERRKKGCWLTDHAAIPVPPTKQDFILAGNLLKRRGGFGKMSQQKWKNRCFVLLKTGNLCYFQAGSFDSVNFCEPPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVEGPPSSDEPARISDTSMRSPTFRRGTSKRLSSPPNGVKHKTRTPSPPSQNGTRSPSARATAVVMEESAQGGTETRGAWMLACVLTAVDVVCYFLHQHEFSLKVFYAAVFTLNLVIGWGMRRSADRPASGERSGTGVPVIHGDDVGALRVALKRRFPPKKDTQPLLPLGDGREIPCGVPVAGSTTQQYDDPAGTLTAPHHSWSNGIESVFHVRGKGYMQDKVKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQ 433
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A835YTM0_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM0_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.700e-88 Identity = 208/643 (32.35%), Postives = 310/643 (48.21%), Query Frame = 3
Query: 42 WLTDHAAIPVPPSKQDFILAGNLLKRRGGFGKMSHQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQ---GGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPARISDTSMRSPTFRLGTSKRLSS-PPNGVKQRTRTPSPPSQNGT--------------------RSPSARAT------------------------------AVVTEESAQGGTDTRYAWTLACVLTAVDVVCYFLHQREFSL--KVFYAAVFTLNLFIGWGMRRSA--DRPA--YGERSGTGVPVIHGDDVGALRVALKRRFPLKKDTQPLLPLGDGRDIPCG--VPVAGSTTQQYDG-PAGTLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMA-SEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGD-------NYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLACSTLHYPMMERAVEF 1757
WL + +PVPP+ DF G L KRR GFGKM+ W+ RCF L + G Y++ FD V+F PPRG L L + + D D +LV++ GG QRWKL +++ ++ ++A+ V+G +S + + T R + K + P + V+ R S NG R + RA+ ++ D R LA V+ V FLH L +F+A V +N+ I +G R D A YG VP++H D+ L +K ++ RD G VP AG+T ++ G AG AP H+W +G S F VRG YM D++K A +LY MVG D + T ARV N++ + V + ++ P +P +P ++V+N Q+P+ P + ++++DGPG+Q + YF + + T A+ +L A V+LW YC + G D++ +GRFK + V+ N GL + + +NGKPVLI ++G G +E INVHRF F AKK+LH+L F+ M+LH+GFT+EGRT DELPE +LAC+ L+YP + A E
Sbjct: 11 WLAEAEGLPVPPTAADFAWVGRLYKRRSGFGKMAAHNWRLRCFGLTRKGTFFYYEEDDFDKVNFANPPRGSLQLVDGDCTFASGRTDSDAHTPYALVVEERRGGHQRWKLCAQSEQDLAALQQAMTKVVEGGGASPPESPLPATKGVPKLARAQSIKGPGAFPLSPVQDSPRCNGGSSCNGXXXXXXXXXXXXXXXXXAGAXRXXAGRASDKRLRAHGGXXXXXXXXAGKXXXXXXXXXXXXXVNTASSSAADPRAIHALALYAQLVNDVLVFLHYWPVELWHPLFFALVAVVNVAIAFGAPRVPPDDDSACIYGA-----VPLVHVHDLPPLVNHIKVMQLARR----------ARDASAGGGVPPAGATVKRAVGYAAGDAAAPAHTWQDGDVSQFVVRGPKYMTDRVKTPSAPALYTMVGCDFYCTPARVSNVSDAHVSVQEISAQAPVPHLPEIPRVIVVNAQMPNQPPDMFSNSDDGPGLQAIFYFAITQQTVDALRDLDKAPSAVKLWARYCAKHGEDEETRGRFKAMCVVGNWADAGLNANLKGWNGKPVLITKTGETFAGKPAAGGGMTCLEMDINVHRFRFPAKKALHTLMERFEKMILHVGFTIEGRTPDELPEGMLACACLNYPCPDEAEEL 638
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A7S2M600_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M600_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.340e-48 Identity = 168/612 (27.45%), Postives = 271/612 (44.28%), Query Frame = 3
Query: 90 FILAGNLLKRRGGFGKMSHQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISK-------NTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPARISDTSMRSPT--FRLGTSKRLSSPPNGV-------KQRTRTPSPPSQNGTRSPSARATAV-VTEESAQGGTDTRYAWTLACVLTAV--DVVCYFLHQREFSLKVFYAAVFTLNLFIGWG-MRRSADRPAYGERSGTGVP---------VIHGDDVGALRVALKRRFPLKKDTQPLLPLGDGRDIP----------------CGVPVAGSTTQQYDGPAGTLTAPHHSWSNGIDSVFHVR-GKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGV----------PPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDNYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLA-CSTLHYPMMERAVE 1754
+ L G++ KRRGGFG+ W R F L LCY + + + PR L L + I++ P D +T + ++W++ + E W A+R P + + SP GTS + + +G K R+PS Q A AV V E G + + T VL V +V YF+ R S + F A +F +N F+ + M R+ + + G G+ V+ D++ A + ++ K Q ++P G +P CG A + P ++ HS+ S+F++R G Y ++K K A +LYD+ +D + N++ + + S+PG+ PP+LVIN LP P++ DG M F + + T ++++ TAS GV+L +C+R + DF+GRFKC+ I + ES +P FI YNGKP L+ +SG + + +NYIE TINV+ ++F+A+K LHSL F+D + ++GFT+E R +E+PE LL C ++ + AV+
Sbjct: 7 YDLCGSMYKRRGGFGRNKENNWVMRSFTLHGQ-ILCYHEEPHPEQITNPSKPRARLNLAKTETIAEMHSKHKQGLPTDHLLTINIYDPVIRNKRKWEMCCISKEEQVMWYNAIR--ASDGPVGDAGVAVGNGGAWSPNRDHHEGTSLQFPNVDSGNNLFSVNRKMIHRSPSMEQQEDVLLTRAAEKAVEVWMEKENSGNNKKEMSTSTMVLLFVTMNVALYFV--RNGSEQTFQATLFFMNAFVLYVVMERTGTKSTSKQTKGKGLKAKVAKKKKKVMETDEINAPAIEIE------KSHQKIMP---GSTMPRSTPVKNTELEMKLQNCGANSAEALRAYATAPTESIQVQPHSYVQTDSSLFNLRIGPNYKRNKQKAPSAPALYDLYSMDFLYDSTALKNVSDKFKIP---------SIPGITDVSTGHAHIPPMLVINTWLPGEEPSVFAKNTDGDTYSIPMVFVLSKDTLEQLKDIDTASPGVKLLSEWCRRAESEPDFKGRFKCMGQIEDIESTSIPKFIHGYNGKPALVTKSGTFTRHENYIEFTINVNYWAFLARKGLHSLMPYFQDFIFNVGFTIEARHDEEMPEVLLGGCRIMNLDPDKAAVD 595
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: W7U5D7_9STRA (EDR2_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5D7_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.830e-43 Identity = 108/281 (38.43%), Postives = 147/281 (52.31%), Query Frame = 3
Query: 999 LTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAMENLATA-SEGVR------------------LWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDN--------YIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLACSTLHYPMMERAVEFD 1760
L P HSW + S F VR + Y + K K E+ Y +V D+ +A VG + L + K PA S PG+PPL ++N QLP PA+ ++++GPG + F +KEST +E A + S VR L Y +R D D +GR K IA AN ++L LPSFI+ YNGKPVLI +SG +G + YIE I VHRF+++A+K L+ F M+L + F VEGR DELPE +L + L+ E AVE D
Sbjct: 118 LALPRHSWGHTSASSFRVRSRHYKRAKKKEPSLEAFYKLVSFDLI--KASVGCVNHVGRLMDLEKVRPARSFPGLPPLFIVNTQLPDGEPAMFNASDNGPGRSAIFVFALKESTVDMLEAHADSPSAAVRERKGKDHREAFSVPPALQLLQEYFRRAPHDPDVRGRLKVIASCANMDALHLPSFISNYNGKPVLITKSGRLHQGISSSNGEDLLYIEMDICVHRFAYVARKGFRYLQKRFSKMILDIAFLVEGREEDELPEQILGAARLNNVDYEAAVEGD 396
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A7S3H9C8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9C8_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.890e-42 Identity = 165/582 (28.35%), Postives = 261/582 (44.85%), Query Frame = 3
Query: 96 LAGNLLKRRGGFGKMSHQKWKNRCFVLLKTGNLCYFQAGSFDSVDFCE-PPRGILTLDEDVVISKNTPPDGDVTGTSSLVIQGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSS--GGPARIS-------DTSMRSPT--FRLGTSKRLSS-PPNGVKQRTRTPSPPSQN-----GTRSPSARATAVVTEESAQGGTDTRYA------------WTLACVLTAVDVVCYFLHQREFSL-KVFYAAVFTLNLFIGWGMRRSADRPAYGERSGTGVPV----IHGDDVGALRVALKRRFP--------------LKKDTQPLLPLG--------------DGRDIPCG-VPVAGSTTQQ-YDGPAGTLTAPHHSWSNGIDSVFHVR-GKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEV-VLDTVTKDLPAVSV--PGVPPLLVINVQLPSASPA-LMTSAEDGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDN----YIENTINVHRFSFIAKKSLH 1619
++G L K+RGGFGKM W+ R F+L K G L Y+ ++ D E RG L L P +G T ++ G+RWKL ++ + RW + F SP P +++ D ++ SPT ++ + +L++ PS PS T +P ATA T+ S + + R A W + V+T V++ Y L + L +V Y V LN + M A R + ++ +H L + FP L+P+G G +P G P+AG T QQ + P +P H+W F+VR G Y + K K A +Y+ +D+F T+ R + + +LD +K V P VP + VI +Q+PS P+ TSA+DGPG +MY+R+ E + +++L+TAS ++L+ +C++ D ++GRFK I N + +G+PS I+ YN KP+LI R+G +G N Y+E I+VH+F+ +AK+S+H
Sbjct: 11 ISGLLYKKRGGFGKMMPNSWQYRFFILSKDGMLTYYDTDGPENKDVFEGKERGRLDLRGTKYDLVMEPTEGAPTPHLIIIQPEEGERWKLCADTKEDHARWWRLIEKFAPDSPDRVVTRPGQLNVQSDDDYDPNVISPTNHSKIKRASQLATRSAEADSLHASVPSTPSSEHLHVRNTHTPVPSATAHSTKTSTKKKSGLRAAKESSAMSQEWVEWVM--VMTIVNICIYALVKHTLQLDQVIYIVV--LNAIVAHTMTLRAGRASKSAQAAAVAQQQCADLHAHQPLHLHASPPPNFPPLTAPIVPSARDRSRSDSNNSLVPVGGTATAGVAHSASTDSGVLVPGGGKPIAGFTLQQVFTEPK---LSPEHTWCKADYRQFNVRVGPDYNRHKKKAPSAVPIYEPFAVDVFCTKLRADHCSPRFQLLDPASKAPINVDTGHPFVPSVFVIQIQIPSDPPSGFFTSADDGPGWAIMMYYRITEDSLNQLKDLSTASPAIKLFAEWCEKCTEDPAWRGRFKVINSCTNLDEMGIPSAISSYNAKPILIRRTGSIFRGVNDGVKYMEMNIHVHKFATLAKQSIH 585
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A7S2MX10_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MX10_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.630e-36 Identity = 81/244 (33.20%), Postives = 139/244 (56.97%), Query Frame = 3
Query: 1014 HSWSNGIDSVFHVR-GKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGV----------PPLLVINVQLPSASPALMTSAE-DGPGVQCVMYFRMKESTARAMENLATASEGVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDNYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLL 1709
HS+ S FH+R G Y + K K +LY++V +D E + + + +LP S+PGV PP+LV+N LP+ +++ + + P CV+ F +++ ++++ AS V+L +C+ + +F+GRFK I ++ E +G+P FIT+YNGKP LI +SG++ + + YIE INVH ++++A+K + +L F +++++GFT+EGR+ ELPE LL
Sbjct: 22 HSYMGVDASTFHLRVGPNYKKKKTKAPSGSALYELVSMDFIQAETFLKDAKDAI-------ELP--SIPGVTDVETGNEFVPPMLVVNSWLPTKDHGPLSNGKLEKPSYICVIVFAIEQWVVEELKDIDNASPAVKLLAEWCREAETNVEFRGRFKAIGLVEEMEKMGIPGFITQYNGKPTLITKSGNFTRHEKYIEMAINVHLWAYVARKGMLTLLPSFAKLLINVGFTIEGRSDMELPEVLL 256
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A8J2SWP2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWP2_9STRA) HSP 1 Score: 152 bits (385), Expect = 6.490e-36 Identity = 156/585 (26.67%), Postives = 244/585 (41.71%), Query Frame = 3
Query: 87 DFILAGNLLKRRGGFGKMSH----QKWKNRCFVLLKTGNLCYFQAGSFDSVDFCEPPRGILTLDEDVVISK-NTPPDGDVTGTSSLVI--QGGGQRWKLSSEAPGEINRWEEALRSFVKGSPSSGGPARISDTSMRSPTFRLGTSKRLSSPPNGVKQRTRTPSPPSQNGTRSPSARATAVVTEESAQGGTDTRYAWTLACVLTAVDVVCYFLHQREFSLKVFYAAVFTLNLFIGWGMRRSADRPAYGERSGTGVPVIHGDDVGALRVALKRRFPLKKDTQPLLPLGDGRDIPC---GVPVAGSTTQQYDGPAGTLTAPHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAE-DGPGVQCVMYFRMKESTARAMENLATASEG--------VRLWVTYCQRVGVDDDFQ-----GRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVK---GDNYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLACSTLHYPMMERAVEFD 1760
+ + G L K+RGG G+ ++ + R F L G L Y+ + +P + L V+S T G L I + GG RWKL++++ + W AL + + S P +D P PP TR + ++V + +G T A V +VC FS+ V L L G+ + R A R T V + DD L PL +G D G PVAG+T + D T P +WS S F VR GY K AE+ Y+ V +D+F T +RV +A +V L + P +P L ++ +PS + + + DG G Q + F++ E R +++LA+ +G ++L +C V ++ F GRFK +A + N + + +PSF +YNGKP LI ++G + +Y+ INVH F ++A+ L S+ F+D +L +GFTVE R+ +ELPE +L C L++ AV ++
Sbjct: 14 ELVAKGTLHKKRGGLGRHTYGVRSSPYVRRYFELTSDGVLSYWD--EHERRKGGDPRNSLNLLASRAVLSVVATTSGGGAPAERVLAIAHEQGGARWKLAADSDEARDAWRRALEPYCRAS----APRPSADVRAVVPDL-----------------------PPDLTATRRKALTRSSVAMGD--RGSTIVALAAFSFVVSVISAIVC---SGGAFSVSV-------LALVHGYALVVLTRRGALDPRPCTSVVKVAEDDS-------------------LPPLPEGIDTASEKKGRPVAGTTIARSDFDI-TGGGPPATWSRAPGSTFRVRQVGYKHHGKKAVSAEAFYECVSVDLFDTSSRVPCLADKVELPAPERVSPDSDIPS---LFIVVAHIPSETGPMSVGPDADGHGYQMCIAFQLTE---RTVQDLASMKQGGSCEREASLKLLKRWCS-VAPEEPFAERKEFGRFKVLAQVRNIDDVSIPSFAKRYNGKPALIRKTGMLYRCGPSGSYLNMDINVHAFGYMARSGLQSIFRDFQDFILSVGFTVESRSDEELPECILGCFDLNHVDYNAAVPWE 530
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: A0A7S2WU40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU40_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.060e-34 Identity = 79/204 (38.73%), Postives = 108/204 (52.94%), Query Frame = 3
Query: 1044 FHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPPLLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAM------ENLATASE-------GVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSGHWVKGDNYIENTINVHRFSFIAKKSL 1616
F +R GY+ K K AE Y++VG+D+F TE RV + V KDLP V VP LLV N+Q P +++ DGPG V+YFR+ T + E LA E + L +CQR D F+GRFKC+ I E G+P YNGKPVLI ++G +GDN+IE +N+HRF+++ + SL
Sbjct: 5 FPLRAVGYLSHKKKAPSAEPFYELVGMDVFRTERRVDRIFERVEFP---KDLPKVPHAEVPALLVFNLQFPGGPQSIVPDG-DGPGASVVLYFRISNQTLDLLHRRAHHEQLAGGDEEASHVAPALNLLAEWCQRAPEDPKFRGRFKCMGFIEEIEKYGIPPIAASYNGKPVLIKKTGTLYRGDNFIEMDVNIHRFTYLCRISL 204
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Match: K0R2X2_THAOC (EDR2_C domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2X2_THAOC) HSP 1 Score: 141 bits (356), Expect = 1.460e-33 Identity = 101/293 (34.47%), Postives = 147/293 (50.17%), Query Frame = 3
Query: 948 VPVAGSTTQ---QYDGPAGTLT-APHHSWSNGIDSVFHVRGKGYMQDKLKVSPAESLYDMVGLDIFSTEARVGNMASEVVLDTVTKDLPAVSVPGVPP-LLVINVQLPSASPALMTSAEDGPGVQCVMYFRMKESTARAME-------NLATASE------------GVRLWVTYCQRVGVDDDFQGRFKCIAVIANSESLGLPSFITKYNGKPVLINRSG-----HWVKGDNYIENTINVHRFSFIAKKSLHSLKGLFKDMVLHLGFTVEGRTADELPESLLACSTLHYPMM 1739
+P AGS+T Q D P T A SW VR GY++ + KVS LY+ V +D F + +R+ +A++V L D V+ P L V+++ +P +P L +S+EDG G+ V YFRMKE T + N AT + GVRL+ +C D FQ RFK I AN E G PS+I KYNGKPVLI R+ + N +E I++H F ++ K++++ +KG + + LGF +EGR +ELPE + + YP +
Sbjct: 28 MPKAGSSTVRVIQVDDPHIDETGATIPSWLGITSFGIDVRSHGYLKTRKKVSSPGELYECVAVDCFMSNSRIPQVATQVQLPEANFDDEGVTKTWKSPDLFVVSISIPMEAPRLGSSSEDGYGMTFVGYFRMKEETRDILRRITAPGYNRATDTSEDDVDVQKRIVNGVRLFEQFCNEAPTDPTFQARFKLIP-FANLEEFGCPSYIAKYNGKPVLIKRNQTTGFLYDYPTLNTMEFDISLHPFPYLFKQAMNYIKGYTEKSIWTLGFVIEGRNDEELPEVAIGVMKICYPSL 319 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig170.4989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig170.4989.1 >prot_Ecto-sp13_S_contig170.4989.1 ID=prot_Ecto-sp13_S_contig170.4989.1|Name=mRNA_Ecto-sp13_S_contig170.4989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=586bp MSDSERRKKGCWLTDHAAIPVPPSKQDFILAGNLLKRRGGFGKMSHQKWKback to top mRNA from alignment at Ecto-sp13_S_contig170:25590..31833- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig170.4989.1 ID=mRNA_Ecto-sp13_S_contig170.4989.1|Name=mRNA_Ecto-sp13_S_contig170.4989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6244bp|location=Sequence derived from alignment at Ecto-sp13_S_contig170:25590..31833- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig170:25590..31833- >mRNA_Ecto-sp13_S_contig170.4989.1 ID=mRNA_Ecto-sp13_S_contig170.4989.1|Name=mRNA_Ecto-sp13_S_contig170.4989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1758bp|location=Sequence derived from alignment at Ecto-sp13_S_contig170:25590..31833- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |