mRNA_Ecto-sp13_S_contig17.4983.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17.4983.1
Unique NamemRNA_Ecto-sp13_S_contig17.4983.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: D7G6U6_ECTSI (Cytosine-C5 specific DNA methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U6_ECTSI)

HSP 1 Score: 773 bits (1995), Expect = 4.790e-279
Identity = 384/412 (93.20%), Postives = 396/412 (96.12%), Query Frame = 1
Query:  124 MHSFGAAAVCLSIVQASGFASTGHYHRPNPQRPGSHALGATGVLEEPPRADPLVALEFYSGIGGLRVSLDKALEAVNLETSVGSFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSRENLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFEGNARGDWGERFKAEQRQVSTV 1359
            MHSF AAAVCLSIVQASGFAST HYHRP+PQRPGSHALGATGVL EPPRADPLVALEFYSGIGGLRVSL+KALEAV+LETSVGSFEISSVANSVYEHNFPGCS+TRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTI+ PPSFLFLENVQGFEGS  H RLLETL ARGFDVEQ+LLSP+QLGIPNSRLRYYCLARRRNAD  GEA DVK+S PQD+AAVPLRPLS+YLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVS E LGRFPSGLDLGPEGKEVRWFSD EMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVA+LLEFMLFEGNA GDWGERF+AEQRQVSTV
Sbjct:    1 MHSFRAAAVCLSIVQASGFASTAHYHRPHPQRPGSHALGATGVLVEPPRADPLVALEFYSGIGGLRVSLEKALEAVSLETSVGSFEISSVANSVYEHNFPGCSVTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRTPPSFLFLENVQGFEGSHAHLRLLETLIARGFDVEQYLLSPNQLGIPNSRLRYYCLARRRNADGMGEATDVKKSFPQDVAAVPLRPLSKYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLGPEGKEVRWFSDGEMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVALLLEFMLFEGNAPGDWGERFRAEQRQVSTV 412          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A0A6H5KAF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF5_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 7.450e-117
Identity = 181/208 (87.02%), Postives = 187/208 (89.90%), Query Frame = 1
Query:  736 LGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSRENLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFEGNARGDWGERFKAEQRQVSTV 1359
            L I ++RLRYYCLARRRNAD K EA DVKESLPQDMAAVP        DPSL GEAAVPLLLSPKACSHANPSLRFDVVTLQST+TTTFTKGYRKHAGRAGPVVLLTDDGERRVS E LGRFPSGLDL  EGKEVRWFSDREMLRLHGFPEAFDFPT+LT RQRCALVGNSVNVEVVA+LLEFMLFE NARGDWGERF+ EQRQVSTV
Sbjct:   35 LNINDTRLRYYCLARRRNADGKREATDVKESLPQDMAAVPC-------DPSLCGEAAVPLLLSPKACSHANPSLRFDVVTLQSTKTTTFTKGYRKHAGRAGPVVLLTDDGERRVSGEKLGRFPSGLDLKTEGKEVRWFSDREMLRLHGFPEAFDFPTSLTLRQRCALVGNSVNVEVVALLLEFMLFEDNARGDWGERFRPEQRQVSTV 235          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A0A6H5KE46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE46_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 4.380e-101
Identity = 152/159 (95.60%), Postives = 154/159 (96.86%), Query Frame = 1
Query:  403 VYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPLSEYL 879
            VYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTI+KPPSFLFLENVQGFEGS THRRLLETLTARGFDVEQ+LLSP QLGIPNSRLRYYCLARRRNAD K EA DVKESLPQDMAAVPLRPLSEYL
Sbjct:    3 VYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIRKPPSFLFLENVQGFEGSHTHRRLLETLTARGFDVEQYLLSPSQLGIPNSRLRYYCLARRRNADGKREATDVKESLPQDMAAVPLRPLSEYL 161          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A0A0G4H2G5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2G5_VITBC)

HSP 1 Score: 233 bits (593), Expect = 2.060e-67
Identity = 142/389 (36.50%), Postives = 213/389 (54.76%), Query Frame = 1
Query:  280 LVALEFYSGIGGLRVSLDKALEAVNLETS-VGSFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPL-------SEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGE--------RRVSRENLGRFPSGLDLGPEGKEV------------------------------------RWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFML 1290
            L   E +SGIGGL +++  A + V +    V +F+++++AN VY HNF G    +  IE LSA + +  AD+WL+SPPCQP+ R G ++D +D R+   LHL  ++K +  PP  LFLENV+ FE S++H+RL++ L ++ + +EQF+++P QLGIPN+R+RYYC+A R + D   EA+   ES+  +M AV  R +        +Y++    G     LL+     +  N +  FDV    +  TTTFTKGY ++ GRAGP++L    G         ++  + N     S  D   +G  V                                    R+FS REMLR+HGFPE F FP  +T RQ+  L+GNS+++ VVA LL++ L
Sbjct:    8 LRVFELFSGIGGLHLAIKDAAQRVGIPFRLVKAFDVNTIANQVYLHNF-GMQPQQGLIEPLSASEFDGRADVWLMSPPCQPYTRGGKQLDAEDTRAAGLLHLCDIIKELAHPPRLLFLENVRCFEKSQSHKRLMDALHSQHYAIEQFIVTPSQLGIPNTRVRYYCIAIR-SRDLTPEASPGVESMAFEMPAVDGREIPADMGRVGDYVERK--GRHLADLLIDRNVFTK-NETFLFDVACEDTRATTTFTKGYGRNEGRAGPILLCDRQGRPLPSYPPAQQTIQVNGPSVDSPEDCRIDGTLVSMETYRHVIDTHVLDTRRFRCVCVSCDDEAAECVRYRYFSPREMLRVHGFPEKFAFPACVTTRQQYGLIGNSISIPVVAHLLQYAL 391          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A9SWH2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SWH2_PHYPA)

HSP 1 Score: 214 bits (545), Expect = 7.140e-61
Identity = 142/376 (37.77%), Postives = 207/376 (55.05%), Query Frame = 1
Query:  277 PLVALEFYSGIGGLRVSLDKA-LEAVNLETSVGSFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIEV-DADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPLSE-YLDPSLYGEAAVPLLLSPKACSHAN-------------------PSLR-------FDVVTLQSTETTTFTKGYRKHAGRAGPVV-----LLTDDGERRVSRENLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFEGN 1302
            P+  LEFYSGIGGLR SL +A +EAV +E    +F+I+ VAN VYEHNF G   ++R+I+ L+   ++   AD W++SPPCQP+ R G + D  D R+ SFL +L +L  +K PP+++ +ENV GFE S TH  L++     GF  ++F+LSP QLGIP SR RY+CLA+++       A +   SL  ++  +PL  ++E  +DP +Y    V   +  + C+  N                   PS         FD+VT  S     FTK Y  +A   G V+     L+T D             P G+ L   G  +R+F+ RE+  LH FP  F FP+ ++ +QR AL+GNS++V VV +LL ++  E N
Sbjct:    7 PMRVLEFYSGIGGLRYSLQEAGVEAVVVE----AFDINEVANDVYEHNF-GHRPSQRNIQRLTVSQLDAYKADTWIMSPPCQPYTRQGLRKDAGDARAFSFLQMLEMLPQMKFPPNYILVENVVGFEDSITHGHLIDMFEDLGFMTQEFILSPLQLGIPYSRPRYFCLAKKKPKSFVQPAYN--NSLLCELGPLPLLKMNEPIIDPGVYCRP-VSDFMEEEPCTSDNLGKCFDMNMCADKWELYKLPSSVLERWGDCFDMVTKDSKRCCCFTKSYGSYAKGTGSVLSTKKALMTQD------------LPEGVSLNSLG--LRYFTPREVANLHSFPPEFSFPSQVSLKQRYALLGNSLSVAVVGVLLRYLFSEPN 360          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A0A1Y1WKJ2_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WKJ2_9FUNG)

HSP 1 Score: 214 bits (544), Expect = 8.710e-61
Identity = 142/371 (38.27%), Postives = 210/371 (56.60%), Query Frame = 1
Query:  274 DPLVALEFYSGIGGLRVSLDKALEAVNLETSVG-SFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIE-VDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNA--DCKGEAADVK------ESLPQD---------MAAVPLRPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSRENLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFP-EAFD-----------FPTALTPRQRCALVGNSVNVEVVAMLLEFMLF 1293
            DP+V LEF+SGIGGL    +++     +  +V  +F+++  AN+VYEHNF G     R+I++L   DI+   A+ WLLSPPCQP+ R G  +D++D+R+   +HL+ +L  ++  P ++FLENV  FE S++  RL+ETL   GF+V + L+SP Q+G+PN+RLRY+ +A+RR A  D +  A   K      +++ +D         + AV   PLS Y+D SL    AV  L  P++       L FD+V   S +T+TFTK Y          +L T + +  V     G     LDLG     +R+FS +E+  LH FP  A D           FP +LT RQ+  L+GNS+NV+VVA L+  +LF
Sbjct:    3 DPVVCLEFFSGIGGLHYGFEQS----GIPGTVAMAFDMNENANTVYEHNF-GLRPNNRAIDYLETADIDKYSANCWLLSPPCQPYTRGGKYLDDEDDRARGLIHLIEMLPKLRNVPRYVFLENVMNFENSQSRTRLVETLGTLGFEVNECLVSPVQMGVPNNRLRYFLIAQRRWAADDVENAARTTKYLARGADAVHKDWPFGPAVKSIDAVCAIPLSSYIDASL---DAVESLRVPQSAILKRQRLEFDIVRASSAQTSTFTKSYGSRNLIGSGSLLQTRNLD--VVENGFGAPERLLDLG-----IRFFSPKEVALLHHFPYRAADSPVADGRHYLGFPASLTQRQQLQLLGNSLNVKVVAELIRHILF 358          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: R7VAP8_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VAP8_CAPTE)

HSP 1 Score: 213 bits (541), Expect = 2.460e-60
Identity = 136/371 (36.66%), Postives = 200/371 (53.91%), Query Frame = 1
Query:  274 DPLVALEFYSGIGGLRVSLDKALEAVNLETSVGSFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIE-VDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNAD---------------CKGEAADVKESLPQDMAA--VPL--------RPLSEYLDPSLYGEAAVPLLLSPKACSHANPSLRF---DVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSRENLGR-FPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFE 1296
            DPL  LE +SGIGG+  +L +    +N E  + + +I++VAN +Y+HNFP C L  R IE +   +   +  D+  +SPPCQPF RVG + D  D R+ SFLHLL ++ T+++   ++F+ENV+GF+GS  HR LLETL A  + +++FL+SP Q GIPNSRLRYY +A+++                  C     +  +S P   A+  VPL        RPLS YL   +  +      L P+   H     RF   D+V   ST +  FTK Y  H   AG V+    D E  ++     + + +  +   +   +R+FS RE+  L  FP  F FP   +  Q   ++GNS+NV VVA+L++ ML E
Sbjct:    3 DPLRVLELFSGIGGMHYALQET--GINHEV-IAAADINTVANDIYKHNFPDCLLMNRCIESIQLSEFSRLRPDLITMSPPCQPFTRVGKQRDIDDPRTKSFLHLLKVISTLERSVKYIFVENVKGFDGSEAHRMLLETLQAADYVMQEFLISPLQCGIPNSRLRYYLMAKKKPLKFQFDTTSQIMTELPACAASYLNHCQSKPDSTASSSVPLYDRCAAMCRPLSSYLQEDMSHD------LLPEKFVH-----RFWVMDIVKPSSTNSCCFTKRYGHHIEGAGSVLQTNTDCEIDLTEYKKTKVYTAETEAAVKQLGLRFFSPREIANLMHFPAHFSFPANFSTVQTYRVLGNSLNVHVVAVLMKLMLIE 359          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: U6KNY2_EIMTE (DNA methyltransferase 2, putative n=2 Tax=Eimeria TaxID=5800 RepID=U6KNY2_EIMTE)

HSP 1 Score: 217 bits (552), Expect = 3.560e-60
Identity = 164/497 (33.00%), Postives = 223/497 (44.87%), Query Frame = 1
Query:  277 PLVALEFYSGIGGLRVSLDKALEAVNLETSVGSF--------EISSVANSVYEHNF---PGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKG---------------------------EAADVK-------ESLPQDM------------AAVPLRPLSEYLDPSLYG---------------------------------------------------EAAVPLLLSPKACSHA----NPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTDDGERRVSRENLGRFPSGLD---------------------------------LGPE------------GKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFE 1296
            PL  +EF+SGIGGLRV L +A EA+  +  VGSF        ++S+ AN VY HNF   P C+    SIEHLS Q ++  A +WLLSPPCQP+ R G K+D QD R+  FLHLL LL +   PP F+FLENV+GFEGS T   +   L  + + V+ FLLSP Q+GIPN+R+RYYCLA R     K                            EA +V        + +P D+            AA  LR + E+L+ ++                                                     E  + L    K  S+     N   R ++V+  ST + TFTKGY ++    GP++L+ ++ +    RE                                           L P+            G  VR+FS RE+LRLHGFPE F FP +L  R++ ALVGNSVNV+VVA+LL+ +L +
Sbjct:   28 PLRVIEFFSGIGGLRVGLVEAGEALR-QRGVGSFAAEFVAAYDVSTTANGVYAHNFSSKPICA----SIEHLSLQQVDGKAQLWLLSPPCQPYTRGGKKLDMQDGRATGFLHLLQLLDSCASPPQFIFLENVRGFEGSDTWHCMQRVLLRKHYSVQHFLLSPTQIGIPNTRVRYYCLATRHTDLPKQQQXXXXXXXXXXQTGLKXXXXXXXXAPEAPEVSALGAAGLQLIPPDLNTEWNPRSPVTSAAPRLRRVGEFLEKNISAAEWEALRVPADRLTRFLESEAEAAXXXXXXXXXXXAEDSANSEFNKKEESTEXXMELNQRKKRNSNTQQKFNNGFRLELVSPSSTASGTFTKGYGRNLHSGGPLLLICEEDQPSGGREAAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLRPDTLERRRFRRLRAGDSVRFFSSRELLRLHGFPETFSFPPSLPFRKKAALVGNSVNVKVVALLLQHLLHQ 519          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: A0A7S4PZZ6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PZZ6_9DINO)

HSP 1 Score: 217 bits (552), Expect = 6.230e-60
Identity = 153/397 (38.54%), Postives = 208/397 (52.39%), Query Frame = 1
Query:  190 GHYHRPNPQRPGSHALGATGVLEEPPRADPLVALEFYSGIGGLRVSLDKALE----AVNLETSVGSFEISSVANSVYEHNF--PGCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPL-------RPLSEYLDPSLY--GEAAVPLLLS-PKACSHANPSLR--FDVVTLQSTETTTFTKGYRKHAG---RAGPVVLLTDDGERRVSRENLGRFPSG--LDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFEGNARG 1311
            G  + PN     S   G  G L +      L  LE +SGIGGLR + + A      A+         E S +AN VY  NF  P   L    +  L  ++++  AD+WLLSPPCQPF RVG K+D  D R+   LHL  LL  +++PP  L LENV GFE S + +R  + LT  G++V QF LSP QLGIPN R R Y LARR      G+   ++E  P   AA          R L++YL+PSL   G  ++P  L  P+A        R  ++VV  +ST ++TFT GYR       R GP++ L     R+ S  +    P G  L L    + VR+F+  E+LR+ GFP+ F FP  LT +    L+G+S+NV+VVA L+  +LFE  + G
Sbjct:  158 GQTNAPNWAHGNSPGSGRVGGLSD------LRVLEIFSGIGGLRAAFECACRLAGTALRPLREWVPVEASHMANGVYAQNFALPYPPLLPCDVRTLEPENVD-GADLWLLSPPCQPFTRVGRKLDTADQRAAPLLHLAGLLPRLRRPPEALLLENVVGFEASESWQRTADVLTTSGYEVRQFSLSPLQLGIPNRRPRVYVLARRSAGGGSGQLHALEEHFPGAAAAASAGLASAAPRTLADYLEPSLRDAGLDSLPEALRVPEAMLERQWQFRRRWEVVGPESTSSSTFTSGYRADCPDVHRFGPLLRLGTSATRQASIGDKF-LPGGRELRLVHPHETVRFFTPGELLRIAGFPDGFTFPAELTTKAHYKLIGDSINVDVVAHLIHHLLFEWTSLG 546          
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Match: UPI0018993F18 (tRNA (cytosine(38)-C(5))-methyltransferase-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018993F18)

HSP 1 Score: 211 bits (536), Expect = 2.000e-59
Identity = 139/354 (39.27%), Postives = 194/354 (54.80%), Query Frame = 1
Query:  280 LVALEFYSGIGGLRVSLDKALEAVNLETSVGSFEISSVANSVYEHNFPGCSLTRRSIEHLSAQDIE-VDADIWLLSPPCQPFCRVGNKMDEQDNRSVSFLHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLLSPHQLGIPNSRLRYYCLARRRNA---DCKGEAADV------KESLPQDMAAVPLRPLSEYLDPS----LYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKHAGRAGPVVLLTD-DGERRVSRE--NLGRFPSGLDLGPEGKEVRWFSDREMLRLHGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFML 1290
            L  LE YSGIGG+  +       V     V + ++++ ANSVY +NFP   L +R+++ LSA++I+ +  D+  +SPPCQPF R G + D QD RS S    L++L T+K  P ++ LENV+GFE S TH  L + L   G+ + ++LLSP Q GIPNSR+R+YCLA+ R A   DC+ E   V      ++  P      P + LS +L  S    L  EA+   LL  K  S    SL  D+V   ST T  FTKGY  +    G V+L    D    V R+  +    P  +        +R+F+ +E+ RL  FPE F FP  L PR +  L+GNSVNV VV  LL+++L
Sbjct:   25 LRVLELYSGIGGMHFACRPERTCV-----VAAVDVNTTANSVYAYNFPDTRLLQRNVQSLSAREIDSLQPDLVTMSPPCQPFTRQGLQRDSQDPRSSSLFAFLNVLSTLKNKPKYILLENVKGFETSATHSTLTQVLQGSGYHIHRYLLSPTQFGIPNSRMRFYCLAKLRPAQFRDCRHEDNGVCSGACQEKPPPGSQEIGPPQSLSSFLSLSDEQDLRNEASY--LLPDKILSRF--SLLLDIVEPTSTNTCCFTKGYGHYVEGTGSVLLQAPTDHMHEVYRQVPHKEAVPEDVLEMLRNLRLRYFTPQEVARLMCFPECFAFPPDLKPRHQYQLLGNSVNVRVVRALLDYLL 369          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17.4983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6U6_ECTSI4.790e-27993.20Cytosine-C5 specific DNA methyltransferase n=1 Tax... [more]
A0A6H5KAF5_9PHAE7.450e-11787.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE46_9PHAE4.380e-10195.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4H2G5_VITBC2.060e-6736.50Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A9SWH2_PHYPA7.140e-6137.77Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1Y1WKJ2_9FUNG8.710e-6138.27S-adenosyl-L-methionine-dependent methyltransferas... [more]
R7VAP8_CAPTE2.460e-6036.66Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
U6KNY2_EIMTE3.560e-6033.00DNA methyltransferase 2, putative n=2 Tax=Eimeria ... [more]
A0A7S4PZZ6_9DINO6.230e-6038.54Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
UPI0018993F182.000e-5939.27tRNA (cytosine(38)-C(5))-methyltransferase-like n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17contigEcto-sp13_S_contig17:52503..55564 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score773.5
Seed ortholog evalue5.1e-221
Seed eggNOG ortholog2880.D7G6U6
Model size1644
KEGG rclassRC00003,RC00332
KEGG koko:K00558,ko:K15336
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
Hectar predicted targeting categorysignal peptide
Exons5
EggNOG free text desc.tRNA methyltransferase activity
EggNOG OGsCOG0270@1,KOG0919@2759
Ec32 ortholog descriptiontRNA (cytosine-5-)-methyltransferase
Ec32 orthologEc-01_012190.1
EC2.1.1.204,2.1.1.37
Cds size1239
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03016,ko03032,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17.4983.1prot_Ecto-sp13_S_contig17.4983.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17 52626..55282 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462890.040453-UTR-Ecto-sp13_S_contig17:52502..526251681462890.040453-UTR-Ecto-sp13_S_contig17:52502..52625Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17 52503..52625 +
1681462890.0999575-UTR-Ecto-sp13_S_contig17:55282..555641681462890.0999575-UTR-Ecto-sp13_S_contig17:55282..55564Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17 55283..55564 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462890.0538397-CDS-Ecto-sp13_S_contig17:52625..529041681462890.0538397-CDS-Ecto-sp13_S_contig17:52625..52904Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17 52626..52904 +
1681462890.0636373-CDS-Ecto-sp13_S_contig17:53311..534121681462890.0636373-CDS-Ecto-sp13_S_contig17:53311..53412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17 53312..53412 +
1681462890.0729287-CDS-Ecto-sp13_S_contig17:53678..538561681462890.0729287-CDS-Ecto-sp13_S_contig17:53678..53856Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17 53679..53856 +
1681462890.081843-CDS-Ecto-sp13_S_contig17:54217..544151681462890.081843-CDS-Ecto-sp13_S_contig17:54217..54415Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17 54218..54415 +
1681462890.0907948-CDS-Ecto-sp13_S_contig17:54799..552821681462890.0907948-CDS-Ecto-sp13_S_contig17:54799..55282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17 54800..55282 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17.4983.1

>prot_Ecto-sp13_S_contig17.4983.1 ID=prot_Ecto-sp13_S_contig17.4983.1|Name=mRNA_Ecto-sp13_S_contig17.4983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
MHSFGAAAVCLSIVQASGFASTGHYHRPNPQRPGSHALGATGVLEEPPRA
DPLVALEFYSGIGGLRVSLDKALEAVNLETSVGSFEISSVANSVYEHNFP
GCSLTRRSIEHLSAQDIEVDADIWLLSPPCQPFCRVGNKMDEQDNRSVSF
LHLLSLLKTIKKPPSFLFLENVQGFEGSRTHRRLLETLTARGFDVEQFLL
SPHQLGIPNSRLRYYCLARRRNADCKGEAADVKESLPQDMAAVPLRPLSE
YLDPSLYGEAAVPLLLSPKACSHANPSLRFDVVTLQSTETTTFTKGYRKH
AGRAGPVVLLTDDGERRVSRENLGRFPSGLDLGPEGKEVRWFSDREMLRL
HGFPEAFDFPTALTPRQRCALVGNSVNVEVVAMLLEFMLFEGNARGDWGE
RFKAEQRQVSTV*
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mRNA from alignment at Ecto-sp13_S_contig17:52503..55564+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17.4983.1 ID=mRNA_Ecto-sp13_S_contig17.4983.1|Name=mRNA_Ecto-sp13_S_contig17.4983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3062bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17:52503..55564+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCGCCTCGGGTTCCAGCCCACCTTGCCATGTAAACTTGCAACCTGCAAC CAGTGCTGGAGGCTTGGTGCTCTCCGCTTGTCCAGCACAAGATTTCGACC ACCCATCGTGTTCACGTGGAAACATGCACTCGTTCGGTGCTGCGGCGGTT TGCCTTTCGATTGTCCAAGCATCCGGGTTTGCATCTACTGGTCATTACCA TCGGCCGAATCCGCAGCGACCAGGAAGTCATGCGCTCGGAGCGACCGGCG TCCTCGAGGAACCCCCACGAGCGGATCCCTTGGTGGCCTTGGAGTTTTAT AGTGGGATAGGTGGGCTGAGAGTATCCCTGGATAAGGCTTTAGAGGCGGT CAACCTTGAAACAAGCGTGGGCAGCTTCGAGATCTCGTCTGTTGCCAATT CGGTGAGACAGGAGCGTCCCTCCCAGAATGTACACAACAGCAGTAGCACT CGTATATCCATGACCAACGTTTAACAGTAGTGTTTGGACGATTGTACAAT ACGCATGCCTCCATCAAGCGAATCAACCGTAGCGCCCCGTCTGTAACGCT CGTCTCACACAGGAGAGCCCCTATGGCAGTGGACACCTGCAACTATGCTA CACATGTACACGCACAACGCACAACATCCTGCCTTAGTCTACTACTGTAC AGCCGTGCACATGCATGTGAGTTTGCTGACGATACCATGCCCGTCATACT TACGGTACCCTTCACGGACGGCAGTAAAGAGAGTCACGGTTGTTACCGCG AGTCTCCACGGAAGCATGAAACTACATGTACCCTCGAACCCGATCCAACT TATATTTAGGTGTATGAGCATAACTTTCCTGGGTGCAGCTTGACGAGACG ATCGATCGAGCATCTTTCGGCTCAAGATATTGAGGTTGACGCGGACATCT GGCTTCTAAGGTTGGTTCGTTGTTCTCAGTGGATAAGTTCATAGACCTGT ATTGTACGGGCTCGTTGGTGAGCTCAAGGGGCGGTTTGCACAGTTGCTGA GAACCTGACTGCTTGTCTGTAATCATTTACTACAGTAGATTTCTCTCCCG CCATAGCGTACTCGGATAACCGTTGGGAATCTCCGACGACTGTTCCACAC AGAACGTCGCAGAACATGTGCCTGAGCGCCAATTCCCATTTTCTGTCTAT CCGTTTCGCTACGTCTACGTGGGCAGCCCGCCGTGCCAGCCTTTCTGCAG AGTTGGAAATAAGATGGACGAACAGGACAACCGCTCGGTCAGCTTCCTGC ATCTGCTGTCTCTGCTCAAAACCATAAAAAAACCGCCGTCGTTCCTGTTC CTAGAGAACGTGCAAGGGTTCGAAGGTTCACGCACTCATCGTCGCCTACT CGAGGTAAGGGCCTACATGTTCGAGGTCACATAAATGCCCATGTACGTGG CTGGTTGTGGTTCAGTGGAAGAGCACATGGGCCGTATTTTGGCCGTGTAT GCGTGGATGTCGCCCTGGTACTGGTCTCCTTACATGAAGTTTGCGCAAGG TTCATGTTTGCTGTACATGGCTAGTTGTTGTTTGGTGGAAGAGTACACAG CCCGTATTTGGCCATGCATGTATGTATGTCGCCCCGGTGCTGGTCCCCGT ACATAGTTTGCGCATTGCCTGAAGTGCGGTGATCCGGTCATTGAAGATGC TGTACTCTTTCACTCAGTTCGATCCTCATCTCCTATTCCGCTGCCCGTGT CCCTGGCCACGTTAGACTTTGACCGCTCGAGGATTCGACGTAGAGCAGTT TTTACTTTCACCTCATCAACTGGGCATTCCAAATAGCCGTCTGCGGTACT ACTGCCTTGCGCGGAGGAGAAATGCCGACTGCAAGGGGGAGGCCGCTGAC GTCAAAGAGTCGCTTCCCCAGGATATGGCAGCGGTGCCCTTGCGTCCGCT CTCCGAGTACTTGGTGAGAGGTGTTGTGCGATGGGGTGTCTTGTCGCGAA GGCTTGTGGAGCCAACATTACTGTACTGACGAACCAAAACCTACTGAGTA GGTACGAGTGGTTTTTGTGGTACCGTCTCTTAACGGGACAAAATCAAACA TGATAATCCGTGTGCTCTTGACCGAGTCAACAATTGTTAACGACAACAAA GCCTGTCTTGTAAGGGATACAATTAACAGACCATCGTGCTTGCCGCGAGC GGCGAACTGCTTCGCCTGCAAACAGGCTCTTACCGTGGGCTCTCGCGCCG ACGCTCGCGTCCCCTTGAAGGACTGGGGTATCCTCAAGTGATTCCTGTGC GGACTTGTTCATGTCTGCGCACACCTCAACCTTACATTGTCACGCAGGAT CCATCCTTATACGGGGAGGCGGCGGTTCCACTCCTCTTATCGCCGAAAGC CTGCTCACACGCAAACCCGTCCCTTCGTTTCGACGTGGTTACCCTACAAT CAACCGAGACGACGACTTTCACCAAAGGCTACCGCAAACATGCGGGACGC GCGGGGCCGGTCGTGCTGTTGACGGATGACGGTGAACGGCGGGTCAGCAG GGAGAACCTAGGTCGCTTCCCATCCGGTTTGGACCTGGGGCCCGAGGGGA AAGAGGTTCGGTGGTTCTCGGATAGGGAGATGCTCCGGTTGCACGGGTTT CCGGAAGCTTTTGATTTCCCGACGGCCCTCACCCCACGTCAGCGGTGTGC GTTGGTAGGCAACAGCGTCAACGTAGAGGTGGTGGCAATGTTGCTCGAGT TTATGCTATTCGAAGGAAACGCGCGAGGAGACTGGGGGGAACGATTCAAG GCCGAGCAGCGGCAGGTGTCGACGGTGTAAATCGTGCCCATGGCATGCGC CGTAGTCACTGGGGGCGACTACCCCTCAACTCATGTTTCGTGTGTGCGTC TTGGGCACGGGGCGTACAATTAGCCAGGAAGGATGGGTATATTCCGGGAG GAGAAATAGTGTACCAAAGTGTTGTGCGAACACGGTGACGCGGGCGTCGG AGTATAGTAACAGAAGCACACGTACCTGAGGAATACAATAAAAGCAGGAG GGCGTGCCGATACTGCGCTACTTCTTGGTACAAAAAAAATGTTTCAACTC GCATTTGGTACG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17:52503..55564+

>mRNA_Ecto-sp13_S_contig17.4983.1 ID=mRNA_Ecto-sp13_S_contig17.4983.1|Name=mRNA_Ecto-sp13_S_contig17.4983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1239bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17:52503..55564+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACTCGTTCGGTGCTGCGGCGGTTTGCCTTTCGATTGTCCAAGCATC
CGGGTTTGCATCTACTGGTCATTACCATCGGCCGAATCCGCAGCGACCAG
GAAGTCATGCGCTCGGAGCGACCGGCGTCCTCGAGGAACCCCCACGAGCG
GATCCCTTGGTGGCCTTGGAGTTTTATAGTGGGATAGGTGGGCTGAGAGT
ATCCCTGGATAAGGCTTTAGAGGCGGTCAACCTTGAAACAAGCGTGGGCA
GCTTCGAGATCTCGTCTGTTGCCAATTCGGTGTATGAGCATAACTTTCCT
GGGTGCAGCTTGACGAGACGATCGATCGAGCATCTTTCGGCTCAAGATAT
TGAGGTTGACGCGGACATCTGGCTTCTAAGCCCGCCGTGCCAGCCTTTCT
GCAGAGTTGGAAATAAGATGGACGAACAGGACAACCGCTCGGTCAGCTTC
CTGCATCTGCTGTCTCTGCTCAAAACCATAAAAAAACCGCCGTCGTTCCT
GTTCCTAGAGAACGTGCAAGGGTTCGAAGGTTCACGCACTCATCGTCGCC
TACTCGAGACTTTGACCGCTCGAGGATTCGACGTAGAGCAGTTTTTACTT
TCACCTCATCAACTGGGCATTCCAAATAGCCGTCTGCGGTACTACTGCCT
TGCGCGGAGGAGAAATGCCGACTGCAAGGGGGAGGCCGCTGACGTCAAAG
AGTCGCTTCCCCAGGATATGGCAGCGGTGCCCTTGCGTCCGCTCTCCGAG
TACTTGGATCCATCCTTATACGGGGAGGCGGCGGTTCCACTCCTCTTATC
GCCGAAAGCCTGCTCACACGCAAACCCGTCCCTTCGTTTCGACGTGGTTA
CCCTACAATCAACCGAGACGACGACTTTCACCAAAGGCTACCGCAAACAT
GCGGGACGCGCGGGGCCGGTCGTGCTGTTGACGGATGACGGTGAACGGCG
GGTCAGCAGGGAGAACCTAGGTCGCTTCCCATCCGGTTTGGACCTGGGGC
CCGAGGGGAAAGAGGTTCGGTGGTTCTCGGATAGGGAGATGCTCCGGTTG
CACGGGTTTCCGGAAGCTTTTGATTTCCCGACGGCCCTCACCCCACGTCA
GCGGTGTGCGTTGGTAGGCAACAGCGTCAACGTAGAGGTGGTGGCAATGT
TGCTCGAGTTTATGCTATTCGAAGGAAACGCGCGAGGAGACTGGGGGGAA
CGATTCAAGGCCGAGCAGCGGCAGGTGTCGACGGTGTAA
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