mRNA_Ecto-sp13_S_contig1694.4951.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1694.4951.1
Unique NamemRNA_Ecto-sp13_S_contig1694.4951.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: D7G2C6_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C6_ECTSI)

HSP 1 Score: 2664 bits (6906), Expect = 0.000e+0
Identity = 1593/1832 (86.95%), Postives = 1613/1832 (88.05%), Query Frame = 1 
Query:    1 GDHHNQGGADGPRASFDGDAHREELLDVRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAKRRTPVRTRARSASPTSRRRASEGSPSTPSRVPADDLSDXXXXXXXXXXGFGGDVDSGSFSVRKRWRTRLRPDWRGSGRSAARNRSHEKPWSPGAAAPGAPAAVGGLVKSSATAMDTPPAPKSSSSPASSMPEESIEGLYSSGRRSRRRSGRGTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMARCEEFASEDIERRILAGHPTLAHRLAATPPADPLPEFWGVMKREAGATRLSGGGQQARVLQTRMVRTLKSYQIARAAWAHLVVPALFAVPRCGSIKASSGKTYLPMPCPVREGQSLYVDKPAVVITFLPPELGGVAGVEASREVLGKSSARPSVAXXXXXXXXXXXXXXXX-VTSGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWVMQSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLLGADDGALGAPPPSGGNPPRSPGPRHH-HDTGTSRLAPAPAGGRGGGEKPTTVLSPSRPSPTKPRGLLPDGDAAXXXXXXXDDGLPSPRWVLRPQTVAGGKGSLAQSVRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWSALVECHSERGNPTTQLRVEMPEHLVVNVTSALVENIKDTASLVVRNWAGR--RPSVATQSSESSGTLLIRNTLGVEVVVQSLDATWGAGDGGGGXXXXXPGGSWDRSVDGHAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVAGVQVGGRGARAYPLIQLSQ------------QPVGDSMSRHARGVAERFMRVPVKGAALNKVGLALVVDVGEKPVAAGGSLGXXXXHRVGALSKGGESLLAASSSASHGGLVAELRTNVCVHNGSASDVEVDMVDVASAAAAVATIPGVKRPGQPAREQDWGGAPAAAPRTXXXXXXXXXDSATVVQLAPGARLALPLPVLSSWQLRIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGRVSRGSDGSXXXXXXXXXXXXXXXX--------RGEMHPDSGGDVGLRTPPTSQKGGGGSGSRRKSVQHVAFDLPPPSPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAI-SSGTADWVLMVQPSYLVTNALPCAMEVEVLQPPVVGGVGGVERSERSRSWGGFGSDLAGHGDVDLWGGWRDGEGSSVSSDEDSDAASLASSVTSSRQTQQSEGMARAVASTSTGVRVKAAVRNPALDLFFLPTSXXXXXXXXXXXXRASGRARSGSRGESVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGARIWPXXXXXXXXXXXXXXXXRPKEYDAFHGFQCVWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPWSPPCYHWSDCFVISTADHVRRIFFNSRQPEDITWRTAARQDWGRSPPVVGWVSPRGAYGRAASREGGWGEGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRARYPSKSTFSARPSAKSGGGGRRGXXXXXXXXXXNGDIGSGDDGAGSGKFNDSGRGGNDXXXXXXXXXXXXXXVSRKGSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAAMAEDAGLCVCDLQ 5421
            GDHHNQGGADGPRASFDGDAHREELL+VRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAKRRTPVRTRARSASPTSRRRASEGSPSTPSRVPADDLSD          GFGGD+DS SFSVRKRWRTRLRPDWRG GRSAARN SHEKPWSP        A                                           SRRRSGRGTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMARCEEFASEDIERRILAGHPTLAHRLAA PPADPLPEFWGVMKREAGATRLSGGGQQARVLQTRMVR LKSYQIARAAWAHLVVPALFAVPRCGSIKASSG TYLPMPCPVREGQSLYVDKPAV+ITFLPPELGGVAGVE S EV+GKSSARP VA                 V  GLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWV+QSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLLGADDGA GAPPPSGG+P RS GPRHH H TG++RLAPAPAGGRGGGE+PTT+LSPSRPSPTKPRGLLPDGDA   XXXXXDDGLPSPRWVLRPQTVAGGKGSLAQ+VRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWS LVECHSERG+ TTQLRVEMPEHLVVNVTSALVENIKDTASLVVRNWAGR   PSVATQSSESSGTLLIRNTLGVEVVVQSLDATWGAGDGGGG     PGGSWDR V+GHAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVAG+QVGGRGARAYPLIQLSQ            QPVGDSMSRHARGVAERFM VPVKGAALNKVGLALVVDVGEKPVAAGGSLG     RV ALSKGGESLL ASSSASHGGLVAELRTNVCVHNGSASDVEVDMVD+ASAAAAVAT PGVKRPGQPA EQDWG APAAAPRT XXXXX     ATVV LAPGARLALPLPVLSSW LRIGGDAT+AWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKS GRVSRGSDGSXXXXXXXXXXXXXXXX        RGEMHPDSGGD GLRT P S++GGG  GSRR SVQ V F LPPPSP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             A  SSGTADWVLMVQPSYLVTNALPCAMEVEVLQPP VGGVGGVERSERSRSWGGFGSDLA HG+VDL GGWRDG GSSVSSDEDSDAASLASSVTSSRQTQQSEG A AVAS STGVRVKAAVRNPALDLFFLPTS XXXXXXXXXX R SGRARSGSRGES  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGARIWP    XXXXXXXXX   R +EYD  HGF  VWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGP SPPCYHWSDCFVISTADH RR FFNSRQPEDITWRTAARQDWGR  PVVG VSP GAYGRAASR GGWGEGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRARYPSKSTFSARPSAKSGGGG R XXXXXXXXXX  DIGSG DGAGSGKF D GRG   XXXXXXXXXXXXX VSR GSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAA AEDAGLCVCDLQ
Sbjct: 1940 GDHHNQGGADGPRASFDGDAHREELLNVRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAKRRTPVRTRARSASPTSRRRASEGSPSTPSRVPADDLSDLAAPGTPSTAGFGGDIDSSSFSVRKRWRTRLRPDWRGGGRSAARNSSHEKPWSP--------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRSGRGTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMARCEEFASEDIERRILAGHPTLAHRLAAIPPADPLPEFWGVMKREAGATRLSGGGQQARVLQTRMVRALKSYQIARAAWAHLVVPALFAVPRCGSIKASSGNTYLPMPCPVREGQSLYVDKPAVLITFLPPELGGVAGVEPSGEVMGKSSARPPVASAASAVSAGATAWGGGGVAGGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWVVQSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLLGADDGAHGAPPPSGGDPARSAGPRHHQHGTGSNRLAPAPAGGRGGGERPTTLLSPSRPSPTKPRGLLPDGDATAGXXXXXDDGLPSPRWVLRPQTVAGGKGSLAQAVRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWSGLVECHSERGDATTQLRVEMPEHLVVNVTSALVENIKDTASLVVRNWAGRYSEPSVATQSSESSGTLLIRNTLGVEVVVQSLDATWGAGDGGGGWGCDAPGGSWDRHVNGHAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVAGIQVGGRGARAYPLIQLSQPPAAAAGQSATAQPVGDSMSRHARGVAERFMCVPVKGAALNKVGLALVVDVGEKPVAAGGSLGGGGARRVEALSKGGESLLTASSSASHGGLVAELRTNVCVHNGSASDVEVDMVDIASAAAAVATTPGVKRPGQPAWEQDWGAAPAAAPRTGXXXXX---XXATVVNLAPGARLALPLPVLSSWHLRIGGDATNAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSSGRVSRGSDGSXXXXXXXXXXXXXXXXXXXXXXXXRGEMHPDSGGDGGLRTSPVSKEGGG-XGSRRMSVQRVGFGLPPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPVSPPVGVTAAAATSSGTADWVLMVQPSYLVTNALPCAMEVEVLQPPAVGGVGGVERSERSRSWGGFGSDLADHGEVDLGGGWRDGGGSSVSSDEDSDAASLASSVTSSRQTQQSEGKATAVASASTGVRVKAAVRNPALDLFFLPTSSXXXXXXXXXX-RGSGRARSGSRGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGARIWPWPHSXXXXXXXXX---RREEYDTIHGFHSVWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPRSPPCYHWSDCFVISTADHARRSFFNSRQPEDITWRTAARQDWGRPSPVVGRVSPGGAYGRAASRGGGWGEGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRARYPSKSTFSARPSAKSGGGGGRXXXXXXXXXXXXXDIGSGXDGAGSGKFKDGGRG-XXXXXXXXXXXXXXXGVSRTGSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAARAEDAGLCVCDLQ 3754
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 2009 bits (5204), Expect = 0.000e+0
Identity = 1239/1523 (81.35%), Postives = 1256/1523 (82.47%), Query Frame = 1 
Query: 1084 MPCPVREGQSLYVDKPAVVITFLPPELGGVAGVEASREVLGKSSARPSVAXXXXXXXXXXXXXXXX-VTSGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWVMQSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLLGADDGALGAPPPSGGNPPRSPGPRHH-HDTGTSRLAPAPAGGRGGGEKPTTVLSPSRPSPTKPRGLLPDGDAAXXXXXXXDDGLPSPRWVLRPQTVAGGKGSLAQSVRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWSALVECHSERGNPTTQLRVEMP-----EHLVVNVTSALVENIKDTASLVVRNWAGRRPSVATQSSESSGTLLIRNTLGVEVVVQSLDATWGAGDGGGGXXXXXPGGSWDRSVDG--------------------------------------------------------------HAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVAGVQVGGRGARAYPLIQLSQQPVGDSMSRHARGVAERFMRVPVKGAALNKVGLALVVDVGEKPVAAGGSLGXXXXHRVGALSKGGESLLAASSSASHGGLVAELRTNVCVHNGSASDVEVDMVDVASAAAAVATIPGVKRPGQPAREQDWGGAPAAAPRTXXXXXXXXXDSATVVQLAPGARLALPLPVLSSWQLRIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGRVSRGSDGSXXXXXXXXXXXXXXXX------RGEMHPDSGGDVGLRTPPTSQKGGGGSGSRRKSVQHVAFDLPPPSPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISSGTADWVLMVQPSYLVTNALPCAMEVEVLQPPVVGGVGGVERSERSRSWGGFGSDLAGHGDVDLWGGWRDGEGSSVSSDEDSDAASLASSVTSSRQTQQSEGMARAVASTSTGVRVKAAVRNPALDLFFLPTSXXXXXXXXXXXXRASGRARSGSRGESVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGARIWPXXXXXXXXXXXXXXXXRPKEYDAFHGFQCVWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPWSPPCYHWSDCFVISTADHVRRIFFNSRQPEDITWRTAARQDWGRSPPVVGWVSPRGAYGRAASREGGWG-EGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRARYPSKSTFSARPSAKSGGGGRRGXXXXXXXXXXNGDIGSGDDGAGSGKFNDSGRGGNDXXXXXXXXXXXXXXV-SRKGSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAAMAEDAGLCVCDLQ 5421
            MPCPVREGQSLYVDKPAVVITFLPPELGGVAGVE SREV+GKSSARP   XXXXXXXXXX       VTSGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWV+QSTDATFRVWRKRYARGQVKLG NEGWRKGCAQYVVLLGADDGALGAPPPSGGNP  SPGPRHH HDTGT+RLAPAPAGGRGGGE+ TTVLSPSRPS TKPRGLLPDGDAA       DDGLPSPRWVLRPQTVAGGKGSLAQ+VRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWSALVECHSERG+ TTQLRVE+        +VV      V +                PSVATQSSESS TLLIRNTLGVEVVVQSLDATW AG GGGG     PGGSWDRSVDG                                                              HAIECRLPAKTEWRDGGVIAADVLVHVPGFQTV GVQVGGRGARAYPLIQLSQQPVGDSMSRHARGVAERFMRVPVKGAALNKVGLALVVDV EKPVAAGGSLG     RVGALSKG ESLLAASSSASHGGLVAELRTNVCVHNGSASDVEVDMVD+ASAAAAVAT PGVKRPGQPA EQDWG APA APRT    XXX    ATVV LAPG+RLALPLPVLSSWQLRIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGRVSRGSDGS XXXXXXXXXXXXXXX      RGEMHPD GGD GLRT P S++       RRKSVQHV FDLPPPSPRS   XXXXXXXXXXX                              A SSGTADWVLMVQPSYLVTNALPCAMEVEVLQPP VGGV GVERS RSRSWGG GSDLAGHG+VDL GGWRDG GSSVSSDEDSDAASLASSVTSSRQTQQSEGMARAVAST TGVRVKAAVRNPALDLFFLPTSXXXXXXXXXXXXRASGRARSGSRGES  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+GGARIWPXXXXXXXXXXXX    RP+EYD  HGFQ VWKGLVGSGQE KVGCVDNDRPFYVRVRLPDPAAGANQPPPGP SPPCYHWSDCFVISTADH RR FFNSRQPEDITWRTAA QDWGR PPVVG VSP G YGRA SR GGWG EGRTR QQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRAR         + S  SGG GR G          NGDIGSG D AGSGKF D       XXXXXXXXXXXXXX  SR GSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAA AEDAGLCVCDLQ
Sbjct:    1 MPCPVREGQSLYVDKPAVVITFLPPELGGVAGVEPSREVMGKSSARPXXXXXXXXXXXXXTSWGGGRVTSGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWVVQSTDATFRVWRKRYARGQVKLGSNEGWRKGCAQYVVLLGADDGALGAPPPSGGNPAFSPGPRHHQHDTGTTRLAPAPAGGRGGGERCTTVLSPSRPSLTKPRGLLPDGDAAAGEGGGGDDGLPSPRWVLRPQTVAGGKGSLAQAVRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNPLVDKREHLVEPWSALVECHSERGDATTQLRVEVEIGCHGPGMVVGYPIIPVYS---------------EPSVATQSSESSDTLLIRNTLGVEVVVQSLDATWEAGHGGGGWGGDAPGGSWDRSVDGDIAAKCFDDFFSEQGAAAVXXXXXXXXXXXXXXXXXXXXXXXGAEHPSHVRDLSRPTAVAAGHAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVGGVQVGGRGARAYPLIQLSQQPVGDSMSRHARGVAERFMRVPVKGAALNKVGLALVVDVREKPVAAGGSLGGGGARRVGALSKGSESLLAASSSASHGGLVAELRTNVCVHNGSASDVEVDMVDIASAAAAVATTPGVKRPGQPAGEQDWGAAPAVAPRTGGRGXXX--XXATVVHLAPGSRLALPLPVLSSWQLRIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGRVSRGSDGSGXXXXXXXXXXXXXXXXXXXXXRGEMHPDFGGDGGLRTSPASKEXXXXX-XRRKSVQHVGFDLPPPSPRSSRAXXXXXXXXXXXVDRPRTKASMSTTTSSPVSPHVGVAAAA--ATSSGTADWVLMVQPSYLVTNALPCAMEVEVLQPPAVGGVSGVERSVRSRSWGGSGSDLAGHGEVDLGGGWRDGGGSSVSSDEDSDAASLASSVTSSRQTQQSEGMARAVASTPTGVRVKAAVRNPALDLFFLPTSXXXXXXXXXXXXRASGRARSGSRGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGARIWPXXXXXXXXXXXXM---RPEEYDTIHGFQRVWKGLVGSGQEGKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPRSPPCYHWSDCFVISTADHARRSFFNSRQPEDITWRTAAGQDWGRPPPVVGRVSPGGGYGRATSRGGGWGGEGRTRRQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRAR--------CQVSGVSGGRGRGGA---------NGDIGSGGDWAGSGKFKDGXXXXXXXXXXXXXXXXXXXXXDSRTGSVSSAEENARIQVSRLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAARAEDAGLCVCDLQ 1483
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: A0A6H5KZA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA2_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 5.630e-94
Identity = 204/257 (79.38%), Postives = 209/257 (81.32%), Query Frame = 1 
Query:    1 GDHHNQGGADGPRASFDGDAHREELLDVRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAKRRTPVRTRARSASPTSRRRASEGSPSTPSRVPADDLSDXXXXXXXXXXGFGGDVDSGSFSVRKRWRTRLRPDWRGSGRSAARNRSHEKPWSPGAAAPGAPAAVGGLVKSSATAMDTPPAPKSSSSPASSMPEESIEGLYSSGRRSRRRSGRGTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMAR 771
            GDHHN+GGADGPRASFDGDAHREELL+VRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAK RT VRTRARSASPTSRRRASEGSPSTPSRVPADDLSD          GFGG VDSGSFSVRKRWRT LRPDWRGSGRS AR+RS+EKPW PGAAAP      GG VKSSATAMDTP           SMPEES+EG              GTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMAR
Sbjct: 1990 GDHHNRGGADGPRASFDGDAHREELLNVRDVVELLRDFLRAKALTESEVSREAEEFMLVILAVEDEAKHRTRVRTRARSASPTSRRRASEGSPSTPSRVPADDLSDLAAPGTPSTAGFGGGVDSGSFSVRKRWRTTLRPDWRGSGRSVARDRSYEKPWLPGAAAP-----AGGPVKSSATAMDTPXXXXXXXXXXXSMPEESMEG--------------GTPRRSSWRGVSISLDHFILALQSFMEEQPDEGYVMAR 2227
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: A0A836C889_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C889_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.660e-73
Identity = 543/1930 (28.13%), Postives = 685/1930 (35.49%), Query Frame = 1 
Query:  757 YVMARCEEFASED------IERRILAGHPTLAHRLAATPPADP--LPEFWGVMKREAGATRLSG-GGQQARVLQTRMVRTLKSYQIARAAWAHLVVPALFAVPRCGSIKASSGKTYLPMPCPVREGQSLYVDKPAVVITFLPPELGG--VAGVEASREVLGKSSARPSVAXXXXXXXXXXXXXXXXVTSGLLTGIMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDW-VMQSTDATFRVWRK--------------------------------------------------RYARGQVKLGCNEGWRKGCAQYVVLLGADDGALGAPPPSGGNPPRSPGPRHHHDTGTSRLAPAPAGGRGGGEKPTTVLSPSRPSPTKPRGLLPDGDAAXXXXXXXDDGLPSPRWVLRPQTVAGGKGSLAQSVRALVDERRKSRAKSRSQLLPGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAAEDA-----------------------------------------------------------FHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYNP----------------LVDKREHLVEPWSALVECHSERGNPTTQLRVEMPEHLVVNVTSALVENIKDTASLVVRNWAGRRPSVAT---------------------------------------QSSES--SGTLLIRNTLGVEVVVQSLDATW-------------GAGDGGGGXXXXXPG----------GSWDRSV-------------------------------------------DGHAIECRLPAKTEWRDGGVIAADVLVHVPGFQTVAGVQVGGRGARAYPLIQLSQQPVGDSMSRHARGVAERFMRVPVKGAALNKV--GLALVVDVGEKPVAAGGSLGXXXX-----------------HRVGALSKGGESLLAASS---------------------------------------------------------------------SASHGGLVAELRTNVCVHNGSASDVEVDMVDVASAAAAVATIPGVKRPGQPAREQDWGGAPAAAPRTXXXXXXXXXDSATVVQLAPGARLALPLPVLSSWQLRIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGRVSRGSDGSXXXXXXXXXXXXXXXXR--------------------GEMHPDSGGDVGLRTPPTSQKGGGGSGSRRKSVQHVAFDLPPPSPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAISSGTADWVLMVQPSYLVTNALPCAMEVEVLQPPVVGGVGGVERSERSRSWGGFGSDLAGHGDVDLWGGWRDGEGSSVSSDEDSDAASLASSVTSSRQTQQSEGMARAVASTSTGVRVKAAVRNPALDLFFLPTSXXXXXXXXXXXXRASGRARSGSRGESVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGGARIWPXXXXXXXXXXXXXXXXRPKEYDAFHGFQCVWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPWSPPCYHWSDCFVISTADHVRRIFFNSRQPEDITWRTAARQDWGRSPPVVGWVSPRGAYGRAASREGGWGEGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNKTGLALNYRARYPSKSTFSARPSAKSGGGGRRGXXXXXXXXXXNGDIGSGDD----------GAGSGKFNDSG-----RGGNDXXXXXXXXXXXXXXVSRKG--SVSSAEENARIQVSRLLLRDATYVGDEEHLGFFG------GRSLPVMLACPSRKLEVMPYALAAMAEDAGLCVCDLQ 5421
            YV ARCEEFAS        + R IL   P+L H LA+ P A    L  FW +  RE G +     GGQ AR LQTRMVR L+SY  AR AW HLVVPA F VPR   I+A+S + Y  MP PV  GQ+ Y+DKP   I  LP  L G  + G+   R+     +      XXXXXXXXXXXXXXXX  + LL       KDR  SGVR+FL+F L  PA+VYVC+D RLR+ PVWL+YF      V+++ +  F VW K                                                  RYA G V+LG NEGWRKGCA Y +LL  D  A                                                                  XXXXXXX     +P W+LRP ++AGGK +LAQ++ +LVD  R  R     + L G             A   G    PV +QY  A ++G +     D +   + A                                                              + +L L   S  L L+HLHPGDWLG+PDSL  R      G+   P                  D  EH +EP        S     TT++R+ +P H VVNV++ LVE +K  A+   + WA     VA                                         S+E   +    I N+LG  V+++   A W             G    GGG      G          GS +  +                                            G ++ C LP      +GG     V V V G++ + GVQV   G   YPL Q + +P   + +             P     L K   G +L         A GG+ G                          L     +  + S                                                                      +A  G L   LRTNVCV N +    EVD+                             G PA                    QL PG    LPLPVL+   LR+ GDAT AW  P+ LSPALLDPA P ALR T  ME NS+ L    +           XXXXXXXXXXXXXXXX                     GE H  S     L +PP +Q              HV  D P  +  S                                              ++  ADWV+ + PSY+VTNALPC +EVE  QP                                                                        ARA A+        AA R+PA DLFFLP S            R               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXX         G   +W+G + SG EA++G +  +RP + RVR+  P             P    WS    ++      R  +N+  P D+ W                     GA G  A+               P+++ AR+WGR + RR   YA YW++NKTG+AL Y+A+   +     R +A   G   RG              GSG +           A  G  ND+G     RGG+                 R    + SSA E+     +  L+ DA+Y  D  +L FFG      G S PVML+CP++K++VMPYA+AA A D  LC+CDLQ
Sbjct: 1900 YVAARCEEFASPVEFASPVVARAILGRAPSLPHLLASLPAAAGARLSAFWDLHARETGGSEGDPFGGQGARALQTRMVRALRSYAFAREAWGHLVVPAAFGVPRALEIRAASERQYAMMPAPVGVGQAYYLDKPQFAIAALPAALRGRLLTGIMTHRK-----ACXXXXXXXXXXXXXXXXXXXXXXGTRLLXXXXXXRKDRSCSGVRAFLSFMLTAPALVYVCHDARLRQKPVWLLYFARVPGAVVRTNECDFEVWEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPGIXXXXXXXXXXXXXXXXXQRYAPGVVRLGANEGWRKGCANYFILLTRDTDAXXX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPYWLLRPPSLAGGKITLAQAIGSLVDAARARRQGGIMRTLAGXXXXXXXXXXXXXAVP-GDHHPPVRMQYNVALEVGGVVLEAADRTTLPQTAQXXXXXXXXXXXXXXXXXAHAAXXXXXXXMAQATXXXXLLXXXXXXXXXXXXXXXXXXXXXXQLQLHLWDLSLRLELQHLHPGDWLGRPDSLRARAAYAVEGSRPLPPYGGSXXXXXXXXXXXXXDGVEHFLEPTRGEATAESSADTATTEIRLHVPRHAVVNVSTGLVEVLKAFATRAAQRWAAAYEPVAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSTERHFNFNFNITNSLGAGVLLRGA-APWSEHGLASPSLRGGGXXXRGGGALPWQEGFLCPDCLRDLGSPEALMLHYRREHGDGGGXXXXXSRXXXXXXXXXXXXXARGDAPSLTLPPGQSVRCALP------EGG---GTVTVLVQGYKPITGVQVASLGIHTYPL-QEAARPAAAAAAPSXXXXXXXXPPQPASRNPLPKTPSGTSLASTQDGLVSAHGGADGSYALVGXXXXXXXXXXXXXXXXXXDGLHSDSTTQFSQSPMPXXXXXXXXXXXXXTLSXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXXXXXXXXXXXXXXXXXXXXXXAAEQGALSVVLRTNVCVRNTALGCAEVDV-----------------------------GLPAP------------------YQLLPGEEAPLPLPVLARRALRVAGDATCAWREPIALSPALLDPATPAALRRTQAMEINSLHLHQRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESHRAS---FTLASPPPTQP-------------HVVEDAPAAALTS----------------------------------------------TATAADWVITIHPSYIVTNALPCTVEVEFTQPSAAAXXXXXXXXX-----------------------------------------------------------ARADAA--------AAARDPAHDLFFLPESVEGAADVD----RGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVLIWRGRIESGHEARLGRLSTERPLWARVRVAAPPRSXXXXXXA--QPDGARWSLAVALAPTARCGRAAYNAAAPADVAW---------------------GAPGSEAAAA------------APQLRLARAWGRGAPRRAVLYAEYWVINKTGVALWYKAKTLRRGGRRERVNA---GDVARGSSDERC-------AGSGVELPERKRLIAKAALQGGRNDAGAATPERGGDGASAPLPEIKERQRHQLRTEHQATSSAAESLNTLAADALMLDASYYSDGLNLQFFGEGFGAGGASAPVMLSCPAKKIQVMPYAMAADATDRRLCICDLQ 3566
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: UPI000D69A051 (DUF1593 domain-containing protein n=1 Tax=Aquimarina sp. AU474 TaxID=2108529 RepID=UPI000D69A051)

HSP 1 Score: 69.3 bits (168), Expect = 7.400e-8
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1 
Query: 1306 IMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLM-YFESTDWVMQSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLL 1575
            IM  + D+  S + + LT  L++PA VYV YD+RL RLPVWL  Y ++ + V  S  A FR+++K++  G V LG NE  +   + Y V++
Sbjct:  648 IMTPNADK-RSTIANLLTIRLNKPADVYVAYDRRLPRLPVWLRSYTDTREHVRTSDGAIFRLYKKKFNAGNVVLGGNESRQDNSSNYFVMV 737
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Match: A0A1Q3GSJ4_9BACT (Uncharacterized protein n=2 Tax=Cytophagales TaxID=768507 RepID=A0A1Q3GSJ4_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 8.380e-7
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 1 
Query: 1306 IMAQSKDRGMSGVRSFLTFTLDRPAVVYVCYDQRLRRLPVWLM-YFESTDWVMQSTDATFRVWRKRYARGQVKLGCNEGWRKGCAQYVVLL 1575
            +M  + D+  S   + LT  L++PA VY+ YD+RL RLPVWL  Y ++ + V  S    FRV++KR+  G   LG NE  +   + Y V++
Sbjct:  621 VMTPNGDK-RSTTANLLTIRLNKPADVYIAYDRRLPRLPVWLRSYTDTREHVRTSDGQIFRVYKKRFNAGNAVLGGNESRQDNSSNYFVMV 710
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1694.4951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G2C6_ECTSI0.000e+086.95C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWU7_9PHAE0.000e+081.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZA2_9PHAE5.630e-9479.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C889_9STRA2.660e-7328.13C2 domain-containing protein n=1 Tax=Tribonema min... [more]
UPI000D69A0517.400e-840.66DUF1593 domain-containing protein n=1 Tax=Aquimari... [more]
A0A1Q3GSJ4_9BACT8.380e-738.46Uncharacterized protein n=2 Tax=Cytophagales TaxID... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1694contigEcto-sp13_S_contig1694:458..14807 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score66.6
Seed ortholog evalue1.3e-07
Seed eggNOG ortholog2880.D8LB75
Model size5421
KEGG rclassRC00055,RC00523
KEGG koko:K01870,ko:K02183,ko:K12486
KEGG ReactionR03656
KEGG Pathwayko00970,ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04144,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map00970,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04144,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Exons18
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5043@1,COG5126@1,KOG0027@2759,KOG1809@2759
EC6.1.1.5
Cds size5421
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko01009,ko03016,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462887.1538866-CDS-Ecto-sp13_S_contig1694:457..6131681462887.1538866-CDS-Ecto-sp13_S_contig1694:457..613Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 458..613 +
1681462887.1705213-CDS-Ecto-sp13_S_contig1694:1069..11841681462887.1705213-CDS-Ecto-sp13_S_contig1694:1069..1184Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 1070..1184 +
1681462887.1845531-CDS-Ecto-sp13_S_contig1694:2017..23601681462887.1845531-CDS-Ecto-sp13_S_contig1694:2017..2360Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 2018..2360 +
1681462887.1972368-CDS-Ecto-sp13_S_contig1694:2561..27171681462887.1972368-CDS-Ecto-sp13_S_contig1694:2561..2717Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 2562..2717 +
1681462887.2068262-CDS-Ecto-sp13_S_contig1694:3651..37281681462887.2068262-CDS-Ecto-sp13_S_contig1694:3651..3728Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 3652..3728 +
1681462887.2166831-CDS-Ecto-sp13_S_contig1694:4278..44711681462887.2166831-CDS-Ecto-sp13_S_contig1694:4278..4471Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 4279..4471 +
1681462887.2270133-CDS-Ecto-sp13_S_contig1694:5184..55271681462887.2270133-CDS-Ecto-sp13_S_contig1694:5184..5527Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 5185..5527 +
1681462887.2372897-CDS-Ecto-sp13_S_contig1694:6110..62421681462887.2372897-CDS-Ecto-sp13_S_contig1694:6110..6242Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 6111..6242 +
1681462887.2550652-CDS-Ecto-sp13_S_contig1694:7003..74421681462887.2550652-CDS-Ecto-sp13_S_contig1694:7003..7442Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 7004..7442 +
1681462887.2717316-CDS-Ecto-sp13_S_contig1694:7853..80261681462887.2717316-CDS-Ecto-sp13_S_contig1694:7853..8026Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 7854..8026 +
1681462887.2799296-CDS-Ecto-sp13_S_contig1694:8287..85091681462887.2799296-CDS-Ecto-sp13_S_contig1694:8287..8509Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 8288..8509 +
1681462887.290418-CDS-Ecto-sp13_S_contig1694:9124..92201681462887.290418-CDS-Ecto-sp13_S_contig1694:9124..9220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 9125..9220 +
1681462887.3005455-CDS-Ecto-sp13_S_contig1694:9566..97351681462887.3005455-CDS-Ecto-sp13_S_contig1694:9566..9735Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 9567..9735 +
1681462887.3106143-CDS-Ecto-sp13_S_contig1694:9918..118431681462887.3106143-CDS-Ecto-sp13_S_contig1694:9918..11843Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 9919..11843 +
1681462887.3216407-CDS-Ecto-sp13_S_contig1694:12450..126331681462887.3216407-CDS-Ecto-sp13_S_contig1694:12450..12633Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 12451..12633 +
1681462887.331807-CDS-Ecto-sp13_S_contig1694:13035..132921681462887.331807-CDS-Ecto-sp13_S_contig1694:13035..13292Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 13036..13292 +
1681462887.344791-CDS-Ecto-sp13_S_contig1694:13987..142521681462887.344791-CDS-Ecto-sp13_S_contig1694:13987..14252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 13988..14252 +
1681462887.3536894-CDS-Ecto-sp13_S_contig1694:14630..148071681462887.3536894-CDS-Ecto-sp13_S_contig1694:14630..14807Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1694 14631..14807 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1694.4951.1prot_Ecto-sp13_S_contig1694.4951.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1694 458..14807 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1694.4951.1

>prot_Ecto-sp13_S_contig1694.4951.1 ID=prot_Ecto-sp13_S_contig1694.4951.1|Name=mRNA_Ecto-sp13_S_contig1694.4951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1807bp
GDHHNQGGADGPRASFDGDAHREELLDVRDVVELLRDFLRAKALTESEVS
REAEEFMLVILAVEDEAKRRTPVRTRARSASPTSRRRASEGSPSTPSRVP
ADDLSDLAAPGTPGTAGFGGDVDSGSFSVRKRWRTRLRPDWRGSGRSAAR
NRSHEKPWSPGAAAPGAPAAVGGLVKSSATAMDTPPAPKSSSSPASSMPE
ESIEGLYSSGRRSRRRSGRGTPRRSSWRGVSISLDHFILALQSFMEEQPD
EGYVMARCEEFASEDIERRILAGHPTLAHRLAATPPADPLPEFWGVMKRE
AGATRLSGGGQQARVLQTRMVRTLKSYQIARAAWAHLVVPALFAVPRCGS
IKASSGKTYLPMPCPVREGQSLYVDKPAVVITFLPPELGGVAGVEASREV
LGKSSARPSVAAAAAAAAGATSWGGGGVTSGLLTGIMAQSKDRGMSGVRS
FLTFTLDRPAVVYVCYDQRLRRLPVWLMYFESTDWVMQSTDATFRVWRKR
YARGQVKLGCNEGWRKGCAQYVVLLGADDGALGAPPPSGGNPPRSPGPRH
HHDTGTSRLAPAPAGGRGGGEKPTTVLSPSRPSPTKPRGLLPDGDAAAGG
GGGGDDGLPSPRWVLRPQTVAGGKGSLAQSVRALVDERRKSRAKSRSQLL
PGGTSRSQLDAAAATAAELGLELAPVELQYTTAFDLGRMSFRVIDPSAAA
EDAFHVKAELCLSHASGSLVLRHLHPGDWLGKPDSLTMRVNAGGLGTYYN
PLVDKREHLVEPWSALVECHSERGNPTTQLRVEMPEHLVVNVTSALVENI
KDTASLVVRNWAGRRPSVATQSSESSGTLLIRNTLGVEVVVQSLDATWGA
GDGGGGWGGDGPGGSWDRSVDGHAIECRLPAKTEWRDGGVIAADVLVHVP
GFQTVAGVQVGGRGARAYPLIQLSQQPVGDSMSRHARGVAERFMRVPVKG
AALNKVGLALVVDVGEKPVAAGGSLGGGGGHRVGALSKGGESLLAASSSA
SHGGLVAELRTNVCVHNGSASDVEVDMVDVASAAAAVATIPGVKRPGQPA
REQDWGGAPAAAPRTGGGGGAGGGDSATVVQLAPGARLALPLPVLSSWQL
RIGGDATDAWSRPLRLSPALLDPAVPNALRLTSDMERNSVCLRMTKSRGR
VSRGSDGSGGAAAAAATAAAAAAARGEMHPDSGGDVGLRTPPTSQKGGGG
SGSRRKSVQHVAFDLPPPSPRSSRASPSQRDGDDGGDGVDRPRTKASTST
TTSSPVSPTAGVAAAAAISSGTADWVLMVQPSYLVTNALPCAMEVEVLQP
PVVGGVGGVERSERSRSWGGFGSDLAGHGDVDLWGGWRDGEGSSVSSDED
SDAASLASSVTSSRQTQQSEGMARAVASTSTGVRVKAAVRNPALDLFFLP
TSSSSETGGGGGGGRASGRARSGSRGESVAGGARNRGERRDDSGGGNVGG
GGQNSGKEGNDSAKGGARIWPWPHSQQQQQQQQQQRMRPKEYDAFHGFQC
VWKGLVGSGQEAKVGCVDNDRPFYVRVRLPDPAAGANQPPPGPWSPPCYH
WSDCFVISTADHVRRIFFNSRQPEDITWRTAARQDWGRSPPVVGWVSPRG
AYGRAASREGGWGEGRTRWQQCPEIKAARSWGRCSARRLTFYAPYWIVNK
TGLALNYRARYPSKSTFSARPSAKSGGGGRRGGSGSRGRGGVNGDIGSGD
DGAGSGKFNDSGRGGNDEGGGSQQSGGGGGGVSRKGSVSSAEENARIQVS
RLLLRDATYVGDEEHLGFFGGRSLPVMLACPSRKLEVMPYALAAMAEDAG
LCVCDLQ
back to top

mRNA from alignment at Ecto-sp13_S_contig1694:458..14807+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1694.4951.1 ID=mRNA_Ecto-sp13_S_contig1694.4951.1|Name=mRNA_Ecto-sp13_S_contig1694.4951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1694:458..14807+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGGACCACCACAACCAAGGCGGTGCGGACGGCCCGAGAGCTTCCTTCGA
CGGCGATGCGCATCGCGAGGAGCTGCTGGACGTGAGGGACGTAGTGGAGC
TGCTGAGGGACTTCCTTCGAGCCAAGGCCCTTACGGAGAGCGAAGTCAGC
CGCGAGGTCCGTGCGTTTGCGCGCGTTTTTCTTGCGTTTGTTTGTTACTA
ATAGCATGGACCGCCCTACACCGGCTGACCGATGAAGATACGTGAGTCTC
AGTTCGGTGGAAACCTGAAGTGTTTGTAAAGGTCATGATCTGGGACCCCT
GAGGCGGCGTCATGGGGGGAGTTTGTGTATGGCTCTAGGGCTGACTGCTG
TGTGTCCTGTTTCCGAAAGAGGGTTTGGGTTGGGTTTGCACGTGGGTGGG
GGGGGGGGCGGCGTACGTGGAGCTCGCGCTGTGTTCAGGTTGTCTTAAGG
CTGCGGTACGGCAGGACCCCCAGCGCTCAAAGGGTGGTTGGAGAGAGACG
TTGCTTCTGTCCATGCGCACTTGTTTTTGTAGGGTTGACGAAAACCAAGT
CTTCTAGAAGTAAAGAAAGCCCCGCTTCCGTCCCCGTGTGTGGTGTTTGG
TCGCTTGCTCAGGCGGAAGAGTTCATGCTGGTCATTCTAGCGGTCGAGGA
TGAGGCGAAACGCCGCACGCCGGTGCGAACGCGGGCTCGAAGCGCGTCTC
CGACTAGTCGGCGGCGGGCGTCTGAAGGTATCTACCGCCGTGCCTTTCTT
TCTTTGTTTTTTTTCTCTTTGTTCTTTCCTCCTGCGTGACCCCGCCTCAT
ACGTCAAACGTGTAGTCTACGCCGCAAGTTGTGTGTAATAGACTGGTGCA
GCGTAGATGGGACGAACACACACACGTGTTGTCCCATACACCTCCATCGC
CTGCAGCAGCGTTGTTTTTCTCCACCGCACTGCTGCCTCGTACTCCATCT
ACATGAGTGCACTCGGTCAGGAGCTACGACGCGGGGTTACCTGAAATAGA
TCCTCGGCGACATGTGCACTTCAACCTTTTTAGCGCTGTAACGGTACGTC
CATATTCGTTTCCTCGTGAACAAGTCTGGTCTGATATTGCTACCGGACAA
GCACTAGCATTTCTAGTGATTAATGGCAGTTCACGACCAGGACTACACCC
AACCAAAGGCCTCCTGAATACAAACGTTTGGGGGGTGTACTTATCTAGTC
TTGCACCGCGACAGAAACATTTTCGACACCATTCTACTTGAGCCGGGGGT
CCCGCAGAATGCATCCCCGTGCGGTTCCGGTAAGGATAGACGAGCCTCTG
TACTGTTGTGAGCCGTAGGTGCCCGGCGGGTGTCTGTACAGGCAGATCAC
CTACAGTACCAGATGGTTGTACACCTTTTTTTTTGTTCCAGAATCTCAGA
GTAGGCCTCTCGTGTTTTGATGAAGCGGCCAGCAAATGCCACGTTGCACT
CATTCGGCTTTTCGTTTATCTTCTTTCTTTCACCGGAAGCCTTCCGTGCG
TTGTATCCGTCGTCCTCGTCCTCTGCCGCGAACGAAACACCAACCGGGCG
TCGTTCGTAGGGTCGCCCTCGACACCGTCGCGAGTCCCCGCCGACGACCT
CAGCGATCTCGCCGCCCCCGGCACCCCCGGCACCGCCGGCTTCGGCGGCG
ACGTAGACTCCGGTTCATTCAGCGTCAGGAAGCGGTGGCGGACCAGGCTG
CGCCCTGATTGGCGGGGGAGCGGGCGCAGCGCGGCGAGAAACCGCTCCCA
CGAGAAGCCGTGGTCGCCGGGGGCGGCAGCGCCGGGGGCGCCAGCGGCGG
TAGGGGGCCTGGTGAAATCAAGCGCCACGGCGATGGACACGCCTCCTGCA
CCAAAGTCTTCTTCTTCTCCCGCCTCCTCCATGCCAGAGGAAAGCATCGA
GGGGTTTATTTGTCCGCAGTGCCGCATGAGGCTTGCGTCGCCCGCCGCCC
TTCTCGCCCACTTCCACATCTTCCACGGTAGCGGGGGGGGCACCGCAAGC
GAGAGGAGCAGAGCGGACGGGGAGAGGGGGGGTGCGGGCGGCTCGGAGGG
GTCCAGCGACGAGGGTAGTGGGGGGGGCGGGGGCGGCAGCGGCGGGGGGG
GGAGCTTGTATTCGAGCGGGAGGCGGAGCAGGAGGAGGAGCGGCAGGGGG
ACGCCGCGCCGCAGCAGCTGGAGGGGGGTGAGCATCAGCCTTGACCACTT
CATCTTGGCACTCCAGAGCTTCATGGAGGAGCAGCCGGACGAGGGCTACG
TGATGGCGAGGTGAATGTTTGCTTTTCGCTGCCGTACGTACCGTAAACTA
CACAAGGTAGCACACCCCCTGGTCCGATTTTCAAAGCTCGACTACTCCAC
GACGAAAAGGATGCACAAATGAAACGATACGTTTTCGTAGAGTTCTCGAC
CAGACGGCTTCAACGCCGCCGTTTTCGACGCTTTGACTCTCTCTGGTGTT
AATAAATCGAGCATTGAAAATCGGTCCAGGGGGTGTGTTATCTTTTGTCG
TAAAGGGTAGGCATACATAACCTTCGTGCTGAAGTGATGCCGATGAACTG
CTGTACCGCAGTCTTGTTTTGGCGGAGTTGCGTGACCAGATCCTTGCACT
CATAGGTTCTATCCAACCGCCCCAGATTCGTAAGTGTAGATGTACCCCAT
ACAAAGAACCCGAAGACCACGTTTCTATGCTTCGCCGCAAGTTATCTGTC
GGAGCTTTTGGTGGCACATAGTGTGTGGGTGTAGGGGGGGTGGGGATGAC
CGGCCAGTTGTGGACAGGAGGGGACCCTTGAACGTGTCCCCCCCCTCTTC
TGAAGCAGAAATGTGCATGTGTTACGCAACTCGGGTTCAAACCCGAAAAC
CGGACCATGGTACGTTTTTCGTCCTTCTGAACAGACCCGGGACGAGAGAA
TGCCGCGTCAACGCCGTCCTCGGCACAATACGTCGGGGGGTTCGCCGACT
AGAGGGCGGGGTATTCAAAAACACCTTTCTAGCGGAGACATTTTGTCTTC
TTCTGCGCAGTCGCTTGCACAAGTGGTGTCTTTTTCTTCTTTCCCGCAGC
CATCCAATGCTTCAGCCACGCTCAAATACCATCCCCCTTACTCGGACCGA
CCCCCACCCCCCCACCCCCTCGCCCGCCCGCACACAATGCCGCCCGCGTG
TCCCTTGTCCCCTATCGCCTGGCCCCTTTCGTTTTGTCGACCAGGTGCGA
GGAGTTTGCCTCCGAAGACATCGAGCGCCGGATTCTTGCGGGTCACCCGA
CGCTGGCGCACCGCCTGGCCGGTGAGAGCTTGGTGGGGACGGTGGCACTT
TCACTCATACGTGGACGTGCCCTAGTTACGGTGGTAAATTTCTCCCCAAC
CTTCCCTCTCGTGCTTTTTTGTGGGCATGGCGTCATTTTCGCCCGTAGGA
TCTTTGGCTATCTCTTTCCTCTTGGAAATTTACGCGGCATGAGTAGCCTG
TGTGGTCTCCTAGCGCTTTTGTTTCTGTTTCCGTAGATGAAGCCGCCATT
GCATCCATCAGAGCCGGTCTTGAGCCTGGCTTCCACTTCCACTGCCGCTG
CTGTCGTCTCGAGCCTTCCACCTGTTCTCTTCTCTCCCCGTGCGCGCACT
GAATCATCACACATTGGTTTGTTTTGAGCCGCTGCGTCCTTAATCTTTTT
TGCTCTTGTGCCCCGGCGTGCCTGTCTTCCTCCTGCGTACTTTTGTGGTG
GCGTCTGCTCTTGACGTAATGTTTACCCCCACCCCACCCATCCCCACCCC
CTTATTTCCCTTCTTTTTGTGTCAACATTCATTCTTTGTCTCGTTTTTAT
TTTTTCCCCCGCCGAGAACAGCAACTCCACCCGCCGACCCCCTCCCCGAG
TTCTGGGGCGTGATGAAGAGGGAGGCTGGCGCGACGCGGCTGTCCGGCGG
CGGGCAGCAGGCCCGCGTGCTGCAGACTCGGATGGTGCGCACCCTGAAGA
GCTACCAGATCGCGCGCGCCGCCTGGGCACACCTCGTCGTTCCCGCCCTC
TTCGCGGTGCCCAGGTATGTGCATGTGCAGTAAGACACGACGACTACACG
CGTTATTTTGCGTGTCTCTGTGTGTGTTCTCCCTTCCCTGCCCCCCAACA
ATCGATGCTCTTGGTGCCGTTGGGCGGGCGGGGGTCTGGTCGTAACCTCC
CCGGTTTCGGCGCCTCTTGTGTGGGCGACGAGAAACGTCTGCCACTCAAG
TTAACGAAATGTCTTTTTTCGACGATCTCCCGAAAGTTGTAGGCTCGTGT
CTGGTGGTCCCCTCCCTGTTTGCGGTTCCTCTGTTGCGGGCAACGAGAAA
CGTCTACCATCGAACGTCTGCCACTCGTGTTAGTGTAGTGAAACCATCGA
CGATCTCTCGAAAGTTGTAGCCTCGTGCGCTCGCAGGATGCCGAACCGTG
CGTATTTTCTGTCTCGGAGGCGTGTGAGCATGGCGAAGGTGTCGTGTTGC
GCACAGCAGTACAGTAAATAGTTGCACATACACACGGCACAACCTGCATG
TCGCACGTTACGTAAACCTTTTGGGTCCTCACGAAGAATGCTGTCTTAAG
TCCCTTTCTTTTATGTTTTTTGTGTTTTACATTTTTTCAAGCATCAGCAA
GCACATACTTGGGCTGCCGGCGTTGTTGCTTGTCGCCCAGACGACGAACT
GCCCTCCACCACCCAGAAAACACCCCAACGCACACACGACACGATGTATG
CACCCGATTCAACCCCGGCCCACGAAGGTGCGGATCGATCAAGGCGTCGT
CGGGCAAAACCTACCTGCCCATGCCGTGCCCGGTCCGCGAGGGACAGTCC
CTCTACGTTGACAAGCCCGCGGTCGTCATCACGTTCCTTCCCCCGGAGCT
AGGCGGGGTGGCGGGGGTCGAAGCCAGCCGCGAGGTTTTGGGAAAGTCGT
CGGCGCGGCCGTCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGGAGCCACC
TCCTGGGGCGGCGGCGGGGTGACTAGCGGGCTGCTGACCGGCATCATGGC
CCAAAGTAAGGACAGGGGCATGAGTGGCGTCAGGAGTTTCTTGACGTTCA
CCCTGGACAGACCGGCCGTGGTGAGCTCGAGTTGATGACACGGCTTTTTG
ACATAGGTTGTGTAGGAGAAAAGTGTGGATTATAGAGCGACATCGCTTTC
GCCCCGGCCATAAAAAATGTGCATGCTACAACTACTGTTTGAGAGAGTGT
GTTTGAGAGAGTGTGTTTTTGGTTTGCCCCGACTCTCTCTGACACCATAG
CCACACCTGTATGTAGCAGTGGCGTTTGGTTACGTGATGTCCGATATCGG
AGCCGCGATGGGAAGGGGCATGTCGACTCGTTGCCCGGTGCCAACTGAGT
ACCAGATAGCACAAGCTCGCGAGACACACAATGTGCGATAAGGTGCTCCA
AAAGAGTGCCCGTCCCCCTCTGCGGGATTCCCCTAACTATTTCATTACCT
TTTCCTTCCTCGCTGCAGCAGTTAAACTGGCTTCTCGAAGCCAGCTTTCT
CGAGATTGGCGGGCACCGTAGGTTCAAAGAACTTGCGACACTACCTTGCC
TTCCTTACGCTGTCCTTCCTTTCGGAGGTGCTGGTTGAATCTCGCCATTT
CCTCTCTTACCCCGCCCGCCTTTCCCGCCCATGTCCCCCTCACCCGACGA
CAGGTGTATGTCTGCTACGACCAGCGTCTGAGGAGGCTCCCCGTGTGGCT
TATGTACTTCGAGAGCACCGACTGGGTCATGCAATCGACGGATGCCACGT
TCAGGGTGTGGAGGAAGCGTTACGCTCGGGGACAGGTGCGCGCGGTCTGT
TTGGTGTCTTTGTGCCGCCTGTGTGACCAGGTTTGGTTCTGTGCTGTGTG
TGCGGCAAGTCTTATCTTTGTGACAGTCTTCTCGTCCTACCGGCGTGACC
CTGGATGATACGTCAAACGCATTTACACAGAAAGGTGTCTAGATTGGCGC
CAGAACAGAGGGACGAGTACCCATACACAGACATTCCTGGGTTCGGGTGA
GGGCTTTTGTATGCTGTGATGTTGTCTCTCAGAAAGGATTGGCAGAGAGG
GGTTCATTTCCGCATTCACATTCAGCGCGTCGCGCATTTTCGAATCTTGT
CCCCCAGCCAAGGACATTGGTTTTAACGGCTGTAGGATTGGCGTGTTTTC
ATTGGTCAGCTGGTTGGCGCGGTCGATGCTTAGAATGAGGGCACATACAC
GCACACACCCGTTCACGGGTCCCAAACCATGGGCTTGAGACGTCTCATCA
TTGGTCAGCCGGTTAGCGCGGTCGATGCCAAACCAAAAGGACACAAGCAC
ACTCACACCACCGGAAGTGGGTGCTCTGTTCGTCGCTGTTCTCCCGTGCG
GTGGTTCCGTTTGCCGCCGGCGTGGAGCGTCTCGTGCCACCGAACGGTTG
ATCGTCCCGTCCCGGATCGTCGGCTTTTTTTTTGCCAACCGCGGGAACGG
TTTTCAGCCTTGCGGCCCTTCCTTGACCTCGGTGACTCTTTTTTCCGTCT
AAGGCAGCCACCACCACCCCGTATGCGATGCGAACGCGCGAGACAGGTGA
AGCTGGGGTGCAACGAGGGCTGGCGCAAGGGCTGCGCGCAGTACGTCGTC
CTCCTCGGCGCGGACGACGGCGCTCTCGGCGCGCCGCCCCCCTCGGGAGG
AAACCCCCCTCGCTCCCCCGGTCCCCGCCACCACCACGACACCGGCACTA
GTCGTCTAGCACCTGCCCCCGCCGGCGGCCGTGGCGGCGGGGAGAAGCCC
ACAACGGTGCTGTCTCCTTCGCGACCATCGCCGACAAAGCCGAGGGGGCT
TCTGCCCGATGGGGACGCCGCGGCGGGAGGAGGGGGGGGCGGGGACGACG
GGCTGCCGTCCCCGCGCTGGGTGCTTCGGCCGCAGACCGTGGCCGGGGGG
AAAGGGTCGCTCGCGCAGTCGGTGCGCGCGCTCGTGGACGAGCGGAGGAA
GAGCCGCGCCAAGTCGCGGAGTCAGCTCTTGCCAGGTGTGTGTATGTGTG
TGCGTTTATTGTTAGCATCGACCGGTTTACCAATGAACGGACGTCAGTCT
CGATGCGGCTAACAACGGAAAACGCTTCTGAAGGCCGTGACGGGGAGGTG
TGTATCGGGGAACGTAAGGCTGTCCTCCGGATTGAAGACGGGAAACGGTA
ATGTGTGGTGAGGGTATTCGTCACGGGCGGCCATAGGTACCAGGTTGTGG
GAGCACGGGCTACAACCCCACAACCTCTAAAGGGTCGACGGCACCGTGTG
CAGCTGACCCCACCATCGCCTATTGCAGCATGGACCCAACCCGCAGGGCG
CCTCGTACTATTTTGTATCCCCATCGTGATGTCGTACTCCTGGGATACAA
CGTTTTTTGTGTTTTTTTTCCACGTGTACTTTGATTCCCTCGCCAGGAGG
CACGTCCCGGTCGCAACTAGACGCGGCCGCCGCGACGGCGGCGGAGCTCG
GGCTGGAGCTGGCGCCGGTAGAGCTACAGTACACGACCGCGTTTGACTTG
GGCCGAATGTCGTTCCGAGTCATCGACCCCAGTGCTGCTGCTGAGGACGC
TTTCCACGTCAAGGCTGAGGTACGGGACTTGCGCCCTCCCTTGCGTCCCT
GTTGGGCCATTTTTGCTTGAGCTTTCGTTGTGAGTGTCGAGTAGTAAGGG
GTTATCCGGCGGAATGCTCTTGATTCTCTGCTTTGCACTCGTCGAACTCC
TGTGGAACATATCAGGGTCATCGAATGCACCAATATCACCGCTCCGCACA
ACCCCTCCCCTCGCGGTGGCCGCACTGCTGCGTCTGAACCCTCTTCGCCA
ATGTGTCGTGATTTTCCCTCCCTCTGACAGCTGTGCCTAAGCCACGCCTC
CGGCAGTCTGGTTCTGCGCCACTTGCACCCGGGAGATTGGCTAGGCAAGC
CCGACAGCCTTACCATGAGGGTGAACGCGGGGGGGCTGGGAACGTACTAC
AACCCCCTGGTGGACAAGAGGGAGCATCTGGTGGAGCCGTGGTCGGCGCT
GGTGGAGTGTCACAGCGAGCGGGGGAATCCCACTACCCAGCTCCGGGTGG
AGGTACAGTCGTGGCTGTGACACAAGAAACATCAGAGGGTACCTTGCAAA
AGCGTGGAAATCGGTTGTCACGGACCCAGTCCACTAAAGCATAGTAGTTG
GGTACCCTATTGTTCCGTATAAGAGGGGGCCCCTATGTAAGAGGGTCGAG
GGTCTTTGTCACACCGCGCTCTTTTACCGGAGCCACGACTGTACTGCTGT
GATAATGCCCGGCTTGTGGGTGGTTTTGGGTTGGTTGTTGATTGATCGGA
GAACAAAGGCTCTCTTGGTTTGCTGTTTCTAGTTTGCAAGGAGAGGAGAG
CAACCGTTCGCATTGAAATGCGGTGTGTCTTCTGTGGTTGACATTTGAGT
CATGCCCGAGACTATCGTGCCGTATGCATCGCCGGGGCGGGACTTGATTT
CCGTGAATCGCATTTGCCCCACGACTGCAAAGGAAGCAGCCGCAGCGATT
GGTAATTCCTCGTGGCCTATCAGCTTTCTTTTCGAGTCCCCCTCTCGCGT
CTGCGATGTCTCGCGCGTACTTTTTCCCCCGTGCCTGGGCCGCTTGCTGA
ACAACGCCTCTTCCGTTGATTGTTTTCTGGCGGTTTTGCCGTCGGCGCGC
TGCATACGGGCCCGCAGATGCCCGAGCACCTCGTGGTGAACGTAACATCG
GCCCTGGTGGAAAACATAAAGGACACCGCTTCTTTGGTGGTGCGGAACTG
GGCCGGCAGGCGAGTCGAGCGCTCGCGCAAAAGGGGCACTTAAGCTGGAC
CTTGAAATCCGTTGTGCGTCGAGAGCGTTCTGTAGCACCCCACGCGTCTA
TCTGGCGCACCTGGCGTGCTTGCCCCACTTTGCAGACGTAGCGTGGGTCA
TCCGACGATGATATCTCGATTTTTGGTAGTACTCCATCGACGTTTGCGCG
AGGTTGCTGCATGCCTCTTCCCACATCCCAGCCGCCAAGAGGGAGTCGTG
ATTCACGGGGCTGCTTCGGTGAGTATGGCGTGCAACTACTTTTTTTTTTT
GCTGCTGCCGCTGCTGAAATTCTGCGCCGCCGCTCGCTTTCCTCGACAGG
TATTCCGAGCCGTCGGTCGCCACCCAGAGCTCCGAAAGTTCGGGCACCTT
GCTCATTCGAAACACTCTCGGGGTAGAGGTGGTCGTCCAAAGCCTTGACG
CGACCTGGGGGGCAGGCGATGGCGGCGGCGGTTGGGGCGGTGATGGTCCC
GGCGGCAGCTGGGACAGAAGCGTGGACGGTGACATCGCAGCCGAATGCTT
CGATGACTTCTTTAGCGAACAGGGCGCTGCTGCTGTCGCTACTGCTGCTG
CTACTGCTGCTACCGATGCTGCTGCTCCTACTGCCATGGCAGCGGCGGCC
GCGGGCGCAGAGCATCCGTCCCACGTACGAGACTTGTCCCGACCGACGGC
GGTGGCCGCAGGGCACGCAATCGAGTGCCGGTTGCCGGCCAAGACGGAGT
GGCGAGACGGGGGCGTCATCGCGGCCGACGTCCTGGTGCACGTGCCCGGC
TTTCAGACGGTGGCAGGCGTTCAGGTCGGGGGCAGAGGCGCCCGCGCCTA
CCCGCTGATCCAGCTCTCCCAGCAACCCGTCGGAGACAGCATGAGTAGGC
ACGCCCGGGGAGTGGCGGAGCGGTTCATGCGCGTGCCCGTCAAGGGCGCC
GCGTTGAACAAGGTCGGGCTAGCGCTCGTGGTGGATGTTGGCGAGAAGCC
CGTCGCCGCCGGTGGCTCCCTTGGTGGGGGCGGTGGGCACCGCGTAGGGG
CCTTGAGCAAAGGCGGCGAAAGCCTGTTGGCGGCCTCGTCGTCCGCGTCT
CACGGGGGGCTCGTGGCCGAGCTGCGGACGAATGTCTGCGTGCACAACGG
GTCGGCGTCCGACGTGGAGGTGGACATGGTGGACGTAGCATCGGCGGCGG
CGGCAGTCGCGACCATCCCCGGCGTCAAGAGACCAGGGCAGCCGGCGCGG
GAACAAGACTGGGGAGGGGCACCGGCGGCGGCGCCCCGGACAGGCGGCGG
CGGCGGCGCCGGTGGCGGTGACAGTGCCACCGTCGTGCAGCTCGCGCCGG
GAGCCCGCCTGGCGCTCCCGCTTCCCGTCCTGTCCTCCTGGCAGTTGCGG
ATCGGGGGCGACGCTACCGACGCCTGGTCCCGACCCCTTCGACTCTCCCC
CGCTCTTCTAGACCCGGCCGTCCCCAACGCGCTCCGCCTGACGAGCGACA
TGGAGCGCAACTCCGTCTGTTTGAGAATGACCAAGTCCAGAGGGCGGGTT
TCTCGGGGGAGCGACGGCAGCGGCGGGGCAGCGGCGGCGGCGGCGACCGC
TGCTGCAGCCGCCGCGGCTAGAGGGGAGATGCACCCGGACTCCGGCGGCG
ACGTTGGCTTGCGGACGCCCCCGACCTCGCAGAAGGGCGGCGGCGGCAGC
GGTTCACGCCGGAAGTCGGTTCAGCACGTGGCCTTCGACCTCCCGCCGCC
CTCCCCCCGCTCGTCCCGGGCGTCACCGTCCCAGCGGGACGGGGACGACG
GCGGCGATGGCGTCGATAGGCCGAGGACAAAGGCGTCCACGTCGACAACC
ACGTCTTCGCCGGTGTCGCCTACCGCGGGAGTAGCAGCGGCGGCGGCGAT
CTCCTCTGGTACCGCAGACTGGGTGTTGATGGTCCAGCCCTCCTACCTCG
TGACCAACGCCCTGCCCTGCGCGATGGAAGTGGAGGTGCTTCAGCCGCCC
GTTGTCGGCGGTGTTGGTGGCGTGGAGCGGAGCGAGCGCAGCCGTTCCTG
GGGGGGCTTTGGCTCCGACCTTGCCGGCCACGGAGATGTCGACCTGTGGG
GAGGGTGGCGGGACGGAGAAGGGTCCAGCGTTAGCAGCGACGAGGACAGC
GACGCCGCCTCTCTGGCGTCCTCGGTGACCTCTTCTCGCCAGACCCAGCA
GAGCGAGGGCATGGCTAGGGCGGTGGCGAGCACCTCGACGGGGGTTCGAG
TCAAGGCCGCCGTTCGCAACCCGGCCCTCGACCTATTCTTCCTACCGACA
TCGTCTTCGTCCGAAACGGGCGGCGGCGGCGGCGGTGGGCGCGCGAGCGG
CAGGGCGAGGAGCGGCAGCCGAGGCGAGAGCGTCGCTGGGGGTGCTAGGA
ATAGAGGTGAGAGACGCGATGATTCCGGTGGCGGAAATGTCGGCGGAGGC
GGGCAAAACAGCGGCAAAGAAGGCAATGATTCGGCGAAAGGTGGGGCGAG
GATCTGGCCATGGCCGCACTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AACGGATGCGACCTAAGGAGTACGACGCTTTCCACGGGTTCCAGTGCGTG
TGGAAGGGGCTCGTCGGCAGTGGACAGGAGGCCAAGGTAAACATTTTTTC
CCAGACTTCAAATACCGCGCAGGTCATGAAGCAAACGAAGAGAGGGGTAA
CTTCCACAGGCGCGGCCAGGGATGTGTTGCTTCGTGCTTGGGACGCGCGG
CGTACGTGTTCCAAGCAAAATTGCCGAATTTCCACGGATAGTTGGGGGGG
ACAAAATGCGGGACAGCTTTCTGATCTACTCCTCCGATACACTCTTGAGC
ATGTGGCGTTATTTTTTTTCGCTTGTTGGTGTACGTTCGCTGTGTGTGGT
TAGGTCCCGCAGGGCAACTCTCGATGTACTTCTCGTAGGCACACCCCGGA
CCTCATGGTTTTCTTTCACAACAATCATCTCTTGATGTCGAAAATCGTTC
GAGCGTTCATGCCCAGTGTCGAAAATTGTCCGACTTTGTCCTTACTCATG
TTCGCCGTAAAGCCTTTTGTGTGGCGACGAAACGAAATCGACGATGGAGA
TTCCAGGACCAGCCTTACGGCGGTTTAGTTTTTCTCTCCGTGTCAACGAT
CGCATTTTTCTTGTTCTTCATGTCCGTGATCGCAAAACATCGACAACAAA
ACCATTTGGTGCTTTTTTTCTTGTTTGTTTTACTGTCGCGCAGGTTGGAT
GCGTGGACAACGACCGCCCTTTCTACGTGCGGGTGCGGCTGCCGGACCCT
GCGGCCGGCGCTAATCAGCCGCCTCCAGGACCCTGGTCCCCGCCCTGCTA
CCACTGGTCCGATTGCTTCGTCATCTCGACGGCTGACCACGTGCGAAGAA
TCTTCTTCAACTCGCGGCAGCCGGAGGTATGTGTGTAGGTAGTAGGCGTT
TTGTGCGTGTGTCCACCGGAGAGGGAACGTGCTAGTTCGGGGTGCTCCTT
TCTTTTTTGCCCTACGCATCACGAACACATGCACACATCACCCCCCAAAG
ACTCTTCCCCATGTTTATTTTTTTCTTTTTGTTCACATTCCTGCGGACCG
GTACGGCATTGCTCACGGACAACGGCCGCAGCACAAGTAACAACAGAATC
AAGAAGAACAAGCCTTGGAACGAACAACGAAAATTACAACGTCTTGCACC
CGGTATCAGCACCTGGCACTGGCGACACTACCACACACAGCTCGAGACGT
TCCTTCCCCTCATCTGTACCTATCCCACCCCCCAACCTCCACCCCCCGAC
TGAACTGACGCGATGTCTCACCTAATAGGACATAACCTGGCGAACGGCCG
CACGGCAAGACTGGGGACGGTCGCCGCCGGTGGTTGGCTGGGTCTCGCCG
AGGGGGGCCTACGGACGGGCGGCGTCGAGGGAAGGAGGGTGGGGAGAAGG
AAGGACGCGTTGGCAGCAGTGCCCCGAGATCAAGGCCGCTCGGTCCTGGG
GGAGGTGCTCGGCACGGCGACTGACCTTTTACGCGCCGTACTGGATCGTG
AACAAGACGGGGTTGGCGCTCAACTACCGCGCCAGGTGTCTTGTCCACCA
CGCATCTACACGTGCTTTTTTTTTGTTTTTGTTTTTCTCGTTCTTGTTTT
TTCATGTCCTTTCAGTCGTGTTCCTGTTTTGCTCGATCTATCTACAGGCG
CCTGTTTCGTATTTTGCTGTTCTTTCCACTCGTAAAATATCAGTGCCTTC
CCTTGTTCTCTTTGCTCCAAATACTCTCGTTCATGGTTTCTGTTGTTTCT
CGGAAAAGGCCCGCTCGGGGACAGAACGTTACGATGTCCCTCGCAAACAT
GCGTGTATGTAGTGGGGATTGATGAAATGCAGGATTGGCCTGTCGTGGGA
CCGTCGGATGAGAAGAGTGGATTCTCCATGTTGATGTTTTTGAATTCACA
AAACGGTAAGAGGAAGATCCATTGTGGATAGCACGATCGCTCATGTCACG
GGGTATCGGGTTTAGTGTTAACCCCCCTTCTCGAGCAAGGCAGACGGGAC
GGGGCCACCGCCTTTTAGGCGGTGCCGCAGCGCGGAGTGGTGCGTTTCTT
CCGCCGCCGCCTCAGCCGCCGACCGCACTTTTAGCTCTGCGTGCAATGCT
TGTCCTCGTCGCAGCGGTTTGCCGTCGACATAGGTCCTGCCGTGCTTTGC
CGTCCGACACTCTGCCCCGCTCCGCCTCGCCCCGCCGCCCGGCTCCGTGA
ACACTTTGACATTTGGTTGTGTTCTTAAAGGTACCCCAGTAAGTCGACCT
TCAGCGCACGCCCCTCTGCAAAGAGTGGCGGCGGCGGGCGCCGTGGCGGC
AGCGGTAGCCGCGGCCGTGGCGGCGTCAACGGCGATATCGGCAGCGGCGA
CGATGGAGCTGGATCGGGGAAGTTCAACGACAGCGGCCGCGGCGGGAACG
ACGAGGGGGGCGGTTCCCAACAAAGCGGCGGCGGCGGCGGTGGTGTCTCG
CGGAAGGGCTCGGTTTCATCCGCGGAAGAGAATGCCCGCATCCAGGTTTG
TTGCTCTAGTCGCGGAGAGACGTTTCCTCTTAGGGCTGGGATACGGGAAT
TACGGGGAAGTGTTAGGCGGATGTGTTACGTAGGGACCGTGTCCTCCATT
CTCCTCCGCGGCCCCCATTTCAATACTGTTAGCACACCACATTATCGTGC
TGAGCACACCACGCTATCGTGCCGGAGTTGGCCCCCACTCGAGTTGACCA
CCTGACACGTACGGTCCGTTCGCCCGAGACACTGCTGCTGCCGGTGTCGG
CGATGAAGTACGCGAAGCAAAGCAAAAAGCAAAACACCGCCCAAGGCCCT
TCCTTGCCTACCCTTCCCCATCATTTAAACGGTGTCGCTGCTCTTTTTCC
TTCCGCCTCCCCTTCCCCATCAGGTGTCGCGGTTGCTCCTTCGAGACGCT
ACGTACGTGGGCGACGAGGAGCACCTCGGCTTCTTCGGCGGTAGGAGCCT
GCCCGTCATGCTCGCCTGCCCGTCCAGGAAGCTGGAGGTGATGCCCTACG
CCCTGGCGGCTATGGCAGAGGACGCCGGGCTCTGCGTTTGCGATCTCCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1694:458..14807+

>mRNA_Ecto-sp13_S_contig1694.4951.1 ID=mRNA_Ecto-sp13_S_contig1694.4951.1|Name=mRNA_Ecto-sp13_S_contig1694.4951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5421bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1694:458..14807+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGGGACCACCACAACCAAGGCGGTGCGGACGGCCCGAGAGCTTCCTTCGA
CGGCGATGCGCATCGCGAGGAGCTGCTGGACGTGAGGGACGTAGTGGAGC
TGCTGAGGGACTTCCTTCGAGCCAAGGCCCTTACGGAGAGCGAAGTCAGC
CGCGAGGCGGAAGAGTTCATGCTGGTCATTCTAGCGGTCGAGGATGAGGC
GAAACGCCGCACGCCGGTGCGAACGCGGGCTCGAAGCGCGTCTCCGACTA
GTCGGCGGCGGGCGTCTGAAGGGTCGCCCTCGACACCGTCGCGAGTCCCC
GCCGACGACCTCAGCGATCTCGCCGCCCCCGGCACCCCCGGCACCGCCGG
CTTCGGCGGCGACGTAGACTCCGGTTCATTCAGCGTCAGGAAGCGGTGGC
GGACCAGGCTGCGCCCTGATTGGCGGGGGAGCGGGCGCAGCGCGGCGAGA
AACCGCTCCCACGAGAAGCCGTGGTCGCCGGGGGCGGCAGCGCCGGGGGC
GCCAGCGGCGGTAGGGGGCCTGGTGAAATCAAGCGCCACGGCGATGGACA
CGCCTCCTGCACCAAAGTCTTCTTCTTCTCCCGCCTCCTCCATGCCAGAG
GAAAGCATCGAGGGCTTGTATTCGAGCGGGAGGCGGAGCAGGAGGAGGAG
CGGCAGGGGGACGCCGCGCCGCAGCAGCTGGAGGGGGGTGAGCATCAGCC
TTGACCACTTCATCTTGGCACTCCAGAGCTTCATGGAGGAGCAGCCGGAC
GAGGGCTACGTGATGGCGAGGTGCGAGGAGTTTGCCTCCGAAGACATCGA
GCGCCGGATTCTTGCGGGTCACCCGACGCTGGCGCACCGCCTGGCCGCAA
CTCCACCCGCCGACCCCCTCCCCGAGTTCTGGGGCGTGATGAAGAGGGAG
GCTGGCGCGACGCGGCTGTCCGGCGGCGGGCAGCAGGCCCGCGTGCTGCA
GACTCGGATGGTGCGCACCCTGAAGAGCTACCAGATCGCGCGCGCCGCCT
GGGCACACCTCGTCGTTCCCGCCCTCTTCGCGGTGCCCAGGTGCGGATCG
ATCAAGGCGTCGTCGGGCAAAACCTACCTGCCCATGCCGTGCCCGGTCCG
CGAGGGACAGTCCCTCTACGTTGACAAGCCCGCGGTCGTCATCACGTTCC
TTCCCCCGGAGCTAGGCGGGGTGGCGGGGGTCGAAGCCAGCCGCGAGGTT
TTGGGAAAGTCGTCGGCGCGGCCGTCGGTGGCGGCGGCGGCGGCGGCGGC
GGCGGGAGCCACCTCCTGGGGCGGCGGCGGGGTGACTAGCGGGCTGCTGA
CCGGCATCATGGCCCAAAGTAAGGACAGGGGCATGAGTGGCGTCAGGAGT
TTCTTGACGTTCACCCTGGACAGACCGGCCGTGGTGTATGTCTGCTACGA
CCAGCGTCTGAGGAGGCTCCCCGTGTGGCTTATGTACTTCGAGAGCACCG
ACTGGGTCATGCAATCGACGGATGCCACGTTCAGGGTGTGGAGGAAGCGT
TACGCTCGGGGACAGGTGAAGCTGGGGTGCAACGAGGGCTGGCGCAAGGG
CTGCGCGCAGTACGTCGTCCTCCTCGGCGCGGACGACGGCGCTCTCGGCG
CGCCGCCCCCCTCGGGAGGAAACCCCCCTCGCTCCCCCGGTCCCCGCCAC
CACCACGACACCGGCACTAGTCGTCTAGCACCTGCCCCCGCCGGCGGCCG
TGGCGGCGGGGAGAAGCCCACAACGGTGCTGTCTCCTTCGCGACCATCGC
CGACAAAGCCGAGGGGGCTTCTGCCCGATGGGGACGCCGCGGCGGGAGGA
GGGGGGGGCGGGGACGACGGGCTGCCGTCCCCGCGCTGGGTGCTTCGGCC
GCAGACCGTGGCCGGGGGGAAAGGGTCGCTCGCGCAGTCGGTGCGCGCGC
TCGTGGACGAGCGGAGGAAGAGCCGCGCCAAGTCGCGGAGTCAGCTCTTG
CCAGGAGGCACGTCCCGGTCGCAACTAGACGCGGCCGCCGCGACGGCGGC
GGAGCTCGGGCTGGAGCTGGCGCCGGTAGAGCTACAGTACACGACCGCGT
TTGACTTGGGCCGAATGTCGTTCCGAGTCATCGACCCCAGTGCTGCTGCT
GAGGACGCTTTCCACGTCAAGGCTGAGCTGTGCCTAAGCCACGCCTCCGG
CAGTCTGGTTCTGCGCCACTTGCACCCGGGAGATTGGCTAGGCAAGCCCG
ACAGCCTTACCATGAGGGTGAACGCGGGGGGGCTGGGAACGTACTACAAC
CCCCTGGTGGACAAGAGGGAGCATCTGGTGGAGCCGTGGTCGGCGCTGGT
GGAGTGTCACAGCGAGCGGGGGAATCCCACTACCCAGCTCCGGGTGGAGA
TGCCCGAGCACCTCGTGGTGAACGTAACATCGGCCCTGGTGGAAAACATA
AAGGACACCGCTTCTTTGGTGGTGCGGAACTGGGCCGGCAGGCGACCGTC
GGTCGCCACCCAGAGCTCCGAAAGTTCGGGCACCTTGCTCATTCGAAACA
CTCTCGGGGTAGAGGTGGTCGTCCAAAGCCTTGACGCGACCTGGGGGGCA
GGCGATGGCGGCGGCGGTTGGGGCGGTGATGGTCCCGGCGGCAGCTGGGA
CAGAAGCGTGGACGGGCACGCAATCGAGTGCCGGTTGCCGGCCAAGACGG
AGTGGCGAGACGGGGGCGTCATCGCGGCCGACGTCCTGGTGCACGTGCCC
GGCTTTCAGACGGTGGCAGGCGTTCAGGTCGGGGGCAGAGGCGCCCGCGC
CTACCCGCTGATCCAGCTCTCCCAGCAACCCGTCGGAGACAGCATGAGTA
GGCACGCCCGGGGAGTGGCGGAGCGGTTCATGCGCGTGCCCGTCAAGGGC
GCCGCGTTGAACAAGGTCGGGCTAGCGCTCGTGGTGGATGTTGGCGAGAA
GCCCGTCGCCGCCGGTGGCTCCCTTGGTGGGGGCGGTGGGCACCGCGTAG
GGGCCTTGAGCAAAGGCGGCGAAAGCCTGTTGGCGGCCTCGTCGTCCGCG
TCTCACGGGGGGCTCGTGGCCGAGCTGCGGACGAATGTCTGCGTGCACAA
CGGGTCGGCGTCCGACGTGGAGGTGGACATGGTGGACGTAGCATCGGCGG
CGGCGGCAGTCGCGACCATCCCCGGCGTCAAGAGACCAGGGCAGCCGGCG
CGGGAACAAGACTGGGGAGGGGCACCGGCGGCGGCGCCCCGGACAGGCGG
CGGCGGCGGCGCCGGTGGCGGTGACAGTGCCACCGTCGTGCAGCTCGCGC
CGGGAGCCCGCCTGGCGCTCCCGCTTCCCGTCCTGTCCTCCTGGCAGTTG
CGGATCGGGGGCGACGCTACCGACGCCTGGTCCCGACCCCTTCGACTCTC
CCCCGCTCTTCTAGACCCGGCCGTCCCCAACGCGCTCCGCCTGACGAGCG
ACATGGAGCGCAACTCCGTCTGTTTGAGAATGACCAAGTCCAGAGGGCGG
GTTTCTCGGGGGAGCGACGGCAGCGGCGGGGCAGCGGCGGCGGCGGCGAC
CGCTGCTGCAGCCGCCGCGGCTAGAGGGGAGATGCACCCGGACTCCGGCG
GCGACGTTGGCTTGCGGACGCCCCCGACCTCGCAGAAGGGCGGCGGCGGC
AGCGGTTCACGCCGGAAGTCGGTTCAGCACGTGGCCTTCGACCTCCCGCC
GCCCTCCCCCCGCTCGTCCCGGGCGTCACCGTCCCAGCGGGACGGGGACG
ACGGCGGCGATGGCGTCGATAGGCCGAGGACAAAGGCGTCCACGTCGACA
ACCACGTCTTCGCCGGTGTCGCCTACCGCGGGAGTAGCAGCGGCGGCGGC
GATCTCCTCTGGTACCGCAGACTGGGTGTTGATGGTCCAGCCCTCCTACC
TCGTGACCAACGCCCTGCCCTGCGCGATGGAAGTGGAGGTGCTTCAGCCG
CCCGTTGTCGGCGGTGTTGGTGGCGTGGAGCGGAGCGAGCGCAGCCGTTC
CTGGGGGGGCTTTGGCTCCGACCTTGCCGGCCACGGAGATGTCGACCTGT
GGGGAGGGTGGCGGGACGGAGAAGGGTCCAGCGTTAGCAGCGACGAGGAC
AGCGACGCCGCCTCTCTGGCGTCCTCGGTGACCTCTTCTCGCCAGACCCA
GCAGAGCGAGGGCATGGCTAGGGCGGTGGCGAGCACCTCGACGGGGGTTC
GAGTCAAGGCCGCCGTTCGCAACCCGGCCCTCGACCTATTCTTCCTACCG
ACATCGTCTTCGTCCGAAACGGGCGGCGGCGGCGGCGGTGGGCGCGCGAG
CGGCAGGGCGAGGAGCGGCAGCCGAGGCGAGAGCGTCGCTGGGGGTGCTA
GGAATAGAGGTGAGAGACGCGATGATTCCGGTGGCGGAAATGTCGGCGGA
GGCGGGCAAAACAGCGGCAAAGAAGGCAATGATTCGGCGAAAGGTGGGGC
GAGGATCTGGCCATGGCCGCACTCGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAACGGATGCGACCTAAGGAGTACGACGCTTTCCACGGGTTCCAGTGC
GTGTGGAAGGGGCTCGTCGGCAGTGGACAGGAGGCCAAGGTTGGATGCGT
GGACAACGACCGCCCTTTCTACGTGCGGGTGCGGCTGCCGGACCCTGCGG
CCGGCGCTAATCAGCCGCCTCCAGGACCCTGGTCCCCGCCCTGCTACCAC
TGGTCCGATTGCTTCGTCATCTCGACGGCTGACCACGTGCGAAGAATCTT
CTTCAACTCGCGGCAGCCGGAGGACATAACCTGGCGAACGGCCGCACGGC
AAGACTGGGGACGGTCGCCGCCGGTGGTTGGCTGGGTCTCGCCGAGGGGG
GCCTACGGACGGGCGGCGTCGAGGGAAGGAGGGTGGGGAGAAGGAAGGAC
GCGTTGGCAGCAGTGCCCCGAGATCAAGGCCGCTCGGTCCTGGGGGAGGT
GCTCGGCACGGCGACTGACCTTTTACGCGCCGTACTGGATCGTGAACAAG
ACGGGGTTGGCGCTCAACTACCGCGCCAGGTACCCCAGTAAGTCGACCTT
CAGCGCACGCCCCTCTGCAAAGAGTGGCGGCGGCGGGCGCCGTGGCGGCA
GCGGTAGCCGCGGCCGTGGCGGCGTCAACGGCGATATCGGCAGCGGCGAC
GATGGAGCTGGATCGGGGAAGTTCAACGACAGCGGCCGCGGCGGGAACGA
CGAGGGGGGCGGTTCCCAACAAAGCGGCGGCGGCGGCGGTGGTGTCTCGC
GGAAGGGCTCGGTTTCATCCGCGGAAGAGAATGCCCGCATCCAGGTGTCG
CGGTTGCTCCTTCGAGACGCTACGTACGTGGGCGACGAGGAGCACCTCGG
CTTCTTCGGCGGTAGGAGCCTGCCCGTCATGCTCGCCTGCCCGTCCAGGA
AGCTGGAGGTGATGCCCTACGCCCTGGCGGCTATGGCAGAGGACGCCGGG
CTCTGCGTTTGCGATCTCCAG
back to top