mRNA_Ecto-sp13_S_contig16933.4947.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI) HSP 1 Score: 362 bits (930), Expect = 1.310e-119 Identity = 174/181 (96.13%), Postives = 175/181 (96.69%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
MAQ+PREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTP DRPVEED VVDGVVRWIVARAES KTFA WKQFLLHDYPAYIAFRTALRTGNF LRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRY RNDM
Sbjct: 170 MAQDPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPSDRPVEEDKVVDGVVRWIVARAESRKTFAVWKQFLLHDYPAYIAFRTALRTGNFGLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYLRNDM 350
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA33_9PHAE) HSP 1 Score: 346 bits (888), Expect = 4.510e-118 Identity = 168/181 (92.82%), Postives = 169/181 (93.37%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
MAQEPREYRQVRRYPGDWH LLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYL SLP PGDRPVEEDTVVDGVV W+VAR S KTF WKQFLLHDYPAYIAFRTALRTGNFRLRLEGL RIAPIFFITGKDKYQFLVV HLTEVSRYSRN M
Sbjct: 5 MAQEPREYRQVRRYPGDWHFLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYL-SLPMPGDRPVEEDTVVDGVVLWLVARTGSRKTFVVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLHRIAPIFFITGKDKYQFLVVHHLTEVSRYSRNGM 184
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.860e-115 Identity = 177/181 (97.79%), Postives = 177/181 (97.79%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSL TPGDRPVEED VVDGVVRWIVAR ESHKTFA WKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM
Sbjct: 929 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLSTPGDRPVEEDEVVDGVVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 1109
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JXE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE3_9PHAE) HSP 1 Score: 337 bits (865), Expect = 5.500e-115 Identity = 165/181 (91.16%), Postives = 167/181 (92.27%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
MAQE EYRQVRRYPGDWHLLLHMAKAML RYWGAGVEFVAKDLG D SKSGEGSNYRRA HHIT F AAFMALCR+EYLKSL TPGDRPVEED VVDGVVRWIVARAESHKTFA WKQFLLHDYPAYIAF TALRTGNFRLRLEGLRRIAP+F ITGKDKY FLVVDHLTEVSRYSRNDM
Sbjct: 5 MAQESSEYRQVRRYPGDWHLLLHMAKAMLTRYWGAGVEFVAKDLGIDESKSGEGSNYRRAFHHITWFLAAFMALCRQEYLKSLQTPGDRPVEEDKVVDGVVRWIVARAESHKTFAVWKQFLLHDYPAYIAFPTALRTGNFRLRLEGLRRIAPVFSITGKDKYHFLVVDHLTEVSRYSRNDM 185
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.610e-114 Identity = 166/181 (91.71%), Postives = 171/181 (94.48%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
MAQ+PREYRQVRRYPGDWHLLLHMAK MLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHH AFWAAF+ALCR+EYL+SLPTPGDRPVEED VVDGVVRWIVARAESHKTFA WKQFLLHDY YIAFRTALRTGNFRLRLEGLRRIAPI F+TGKDKYQFLV DHLTEVS YSRNDM
Sbjct: 40 MAQKPREYRQVRRYPGDWHLLLHMAKVMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHAMAFWAAFIALCRQEYLESLPTPGDRPVEEDNVVDGVVRWIVARAESHKTFAVWKQFLLHDYHEYIAFRTALRTGNFRLRLEGLRRIAPILFVTGKDKYQFLVADHLTEVSGYSRNDM 220
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 324 bits (831), Expect = 8.380e-102 Identity = 163/184 (88.59%), Postives = 163/184 (88.59%), Query Frame = 1
Query: 1 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLV---VDHLTEVSRYSRNDM 543
MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMAL PVEED VVDGVVRWIVARAESHK FA WKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLV VDHLTEVSRYSRNDM
Sbjct: 40 MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMAL---------------PVEEDKVVDGVVRWIVARAESHKAFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVFLVVDHLTEVSRYSRNDM 208
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE) HSP 1 Score: 245 bits (625), Expect = 2.280e-75 Identity = 123/179 (68.72%), Postives = 140/179 (78.21%), Query Frame = 1
Query: 7 QEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
QE YRQ+RRYPGDWHLLLHMAKA+L+RYWGAGVEFVAKDLGTD SKS EGSNYRRAHHH+ W A M+LC + L PG+ ED VV WI RA HKTFA W+QFLLHD+PAY+AFRTALRTG+F LRL+ LRRIAPIF+ITGKD+YQFLVVD L E+SR S +D+
Sbjct: 219 QERMAYRQLRRYPGDWHLLLHMAKALLKRYWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEARMSLCPKMCLP----PGEDMTAEDAD-SMVVAWIKKRAAEHKTFALWQQFLLHDFPAYMAFRTALRTGDFMLRLDALRRIAPIFYITGKDRYQFLVVD-LAEMSRMSESDL 391
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JND3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND3_9PHAE) HSP 1 Score: 249 bits (635), Expect = 2.120e-73 Identity = 126/161 (78.26%), Postives = 130/161 (80.75%), Query Frame = 1
Query: 61 LLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
LL +AKAM RYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHH TAFWA FMALCR+EYLKSLPTPGDRPVEE VVDGVVRWIVARAES+KTF+ WKQFLL DYPAYIAFRT LRTGN RLRLEGLR HLTEVSRYSRNDM
Sbjct: 108 LLQVAKAMHWRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHKTAFWAVFMALCRQEYLKSLPTPGDRPVEEGKVVDGVVRWIVARAESYKTFSVWKQFLLLDYPAYIAFRTTLRTGNLRLRLEGLRH-------------------HLTEVSRYSRNDM 249
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE) HSP 1 Score: 243 bits (621), Expect = 6.500e-73 Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 7 QEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGV-VRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
QE YRQ RRYPGDWHLLLHMAKA+L+R WGAGVEFVAKDLGTD SKS EGSNYRRAHHH+ W A M+LCRE L PG+ + ED D + V WI RA HKTFA W+QFLLHD+PAY+ FR ALRTG+F LRL+ L RIAPIF+ITGKD+YQ LVVDHL E+SR S +D+
Sbjct: 579 QERIAYRQFRRYPGDWHLLLHMAKALLKRCWGAGVEFVAKDLGTDNSKSSEGSNYRRAHHHLVVMWEALMSLCREMCLP----PGEGMLAEDA--DSMAVAWINKRAAEHKTFALWEQFLLHDFPAYMTFRIALRTGDFMLRLDALHRIAPIFYITGKDRYQLLVVDHLAEMSRMSESDL 752
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Match: A0A6H5JK56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK56_9PHAE) HSP 1 Score: 244 bits (622), Expect = 6.050e-72 Identity = 116/138 (84.06%), Postives = 123/138 (89.13%), Query Frame = 1
Query: 130 LGTDGSKSGEGSNYRRAHHHITAFWAAFMALCREEYLKSLPTPGDRPVEEDTVVDGVVRWIVARAESHKTFAAWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDM 543
LG D SKSG+GSNYRRAHHHITAFW+AFMALCREE LK PT GDRPVE+D VVDGV+ WI AR E+HKTFA WKQFLLHDYPAYIA RTALRTGNFRLRL+ LRRIAP F ITGKDKYQFLV+DHLTEVSRYSRNDM
Sbjct: 35 LGKDDSKSGKGSNYRRAHHHITAFWSAFMALCREECLKGSPTRGDRPVEDDEVVDGVIWWIAARVEAHKTFAVWKQFLLHDYPAYIASRTALRTGNFRLRLDALRRIAPNFCITGKDKYQFLVIDHLTEVSRYSRNDM 172 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16933.4947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16933.4947.1 >prot_Ecto-sp13_S_contig16933.4947.1 ID=prot_Ecto-sp13_S_contig16933.4947.1|Name=mRNA_Ecto-sp13_S_contig16933.4947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp MAQEPREYRQVRRYPGDWHLLLHMAKAMLRRYWGAGVEFVAKDLGTDGSKback to top mRNA from alignment at Ecto-sp13_S_contig16933:3209..3751+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16933.4947.1 ID=mRNA_Ecto-sp13_S_contig16933.4947.1|Name=mRNA_Ecto-sp13_S_contig16933.4947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16933:3209..3751+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16933:3209..3751+ >mRNA_Ecto-sp13_S_contig16933.4947.1 ID=mRNA_Ecto-sp13_S_contig16933.4947.1|Name=mRNA_Ecto-sp13_S_contig16933.4947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16933:3209..3751+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |