mRNA_Ecto-sp13_S_contig16922.4946.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: D8LTT3_ECTSI (Eukaryotic translation initiation factor 4E-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTT3_ECTSI) HSP 1 Score: 286 bits (731), Expect = 4.770e-97 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTAAR 405
WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTAAR
Sbjct: 30 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTAAR 164
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A835ZBP0_9STRA (Eukaryotic translation initiation factor 4E-like 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBP0_9STRA) HSP 1 Score: 197 bits (501), Expect = 4.680e-62 Identity = 87/135 (64.44%), Postives = 104/135 (77.04%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTAAR 405
WG +M SL EF TVEDFW+ YNN+PKPSQV FDG RK+VGDR I+S+SIFKKGI+PEWE P N+ GGEW R ++ P LD WE++VLGL+GET+D DEICGARVVDKS+ YRFELWLR+ + T AR
Sbjct: 31 WGSNMTSLGEFNTVEDFWRFYNNIPKPSQVFFDGKSRKRVGDRQIESFSIFKKGIRPEWEDPANARGGEWSCRERLQPIVLDTLWESLVLGLIGETIDWADEICGARVVDKSRGKDTYYRFELWLRAREPGTTAR 165
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: R1BIV2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIV2_EMIHU) HSP 1 Score: 169 bits (427), Expect = 6.580e-51 Identity = 73/127 (57.48%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 7 DSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSND 387
D+M L E ATVEDFW+ +NN+PKPS++ +DG RKK R ++++S+FKK IKPEWE P N G EW R T LD FW ++VLG++GET+D GDEICGARVVDKS N +YR ELW R ND
Sbjct: 30 DNMAKLCEVATVEDFWRAWNNIPKPSEIFYDGRTRKKFASRTVEAFSVFKKNIKPEWEDPANRSGAEWYCRRAFTMPQLDEFWLHIVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKND 156
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A7S2XVT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVT5_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.410e-48 Identity = 70/129 (54.26%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSND 387
W +MQ + FATVEDFW YN++PKPS + +DG RK+VGDR ++S SIFK+GI PEWE P N+ GGE+ R P LD WEN+++G++GET+D D I GARVVDKSK VY+ ELW++S +
Sbjct: 29 WAGNMQKICTFATVEDFWAYYNHIPKPSAIFYDGQTRKRVGDRQLESLSIFKEGINPEWEDPVNAKGGEFSCRKTFDPVTLDKLWENLLMGIIGETIDWADHISGARVVDKSKGTRAVYKLELWVKSKE 157
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A7S2CNW6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CNW6_9EUKA) HSP 1 Score: 162 bits (410), Expect = 3.390e-48 Identity = 69/131 (52.67%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 7 DSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTA 399
D+M+ L E AT+EDFW+ +NN+PKPS + +DG RKK +R ++S+S+FKK IKPEWE P N G EW R Q LD FW ++VLG++GET+D D+ICGARVVDKS +YR ELW + D A
Sbjct: 40 DNMEKLCEVATIEDFWRAFNNIPKPSAIFYDGRTRKKFANRSVESFSLFKKNIKPEWEDPMNRSGAEWFCRKTFASQQLDEFWRDLVLGMIGETIDPADDICGARVVDKSSGTRQMYRLELWFKRKDDAVA 170
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A7S3EX75_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EX75_9EUKA) HSP 1 Score: 162 bits (410), Expect = 4.310e-48 Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 1
Query: 7 DSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTA 399
D+M+ L E ATVEDFW +NN+PKPSQ+ FDG +K+ +R ++S+S+FKK IKPEWE P N G EW R Q LD FW+N+ LG++GET+D GDEICGARVVDK +YR ELW + D A
Sbjct: 48 DNMEKLCEMATVEDFWCAWNNIPKPSQIFFDGKTKKRFANRSVESFSLFKKNIKPEWEDPANRAGAEWFCRRNFPMQQLDDFWQNLALGMIGETIDHGDEICGARVVDKCAGGRCMYRLELWFKKKDQGIA 178
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A7S0HHF8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHF8_9EUKA) HSP 1 Score: 163 bits (413), Expect = 4.490e-48 Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 7 DSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTA 399
D+M L EFAT+EDFW+++NN+PKPS + +DG +KK DR ++S+S+FKKG+KPEWE N G EW R LD FW+++VLG+VGET+D DEICGARVVDKS +YR ELW R D A
Sbjct: 85 DNMAKLCEFATIEDFWRLWNNIPKPSAIFYDGRTKKKFKDRTVESFSLFKKGVKPEWEDAANRTGAEWFCRKTFPMPQLDSFWQDLVLGMVGETIDPADEICGARVVDKSSGTRCMYRLELWFRKKDETIA 215
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A5D6YGR4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YGR4_9STRA) HSP 1 Score: 162 bits (409), Expect = 4.950e-48 Identity = 71/138 (51.45%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNH-----NVYRFELWLRSNDGNTA 399
+ D + L F TVE+FW +NN+PKPSQV+FDG +KK DR ++S+++FK+GI PEWE PEN GGEW R ++ P+ALD +W+ +VLG +GET+D GDEI G RV+ K+K + N YRFE+WLR+ D A
Sbjct: 29 YADKLFKLCTFRTVEEFWSYWNNIPKPSQVLFDGFTKKKFADRTVESFAVFKEGITPEWEDPENKRGGEWSIRQEIGPEALDEYWDKLVLGAIGETIDPGDEITGVRVIHKNKRDKKNETGNNYRFEIWLRTPDRGRA 166
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: K3WHW2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHW2_GLOUD) HSP 1 Score: 159 bits (402), Expect = 5.540e-47 Identity = 70/133 (52.63%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNH----NVYRFELWLRSND 387
+GD + L F TVE+FW +NN+PKPSQV+FDG +KK DR ++S+++FK GI PEWE PEN GGEW R ++ +ALD FW+ +VLG +GET+D G+EI G RV+ K+K + N YRFE+WLR+ D
Sbjct: 29 YGDKLFKLCSFRTVEEFWAYWNNIPKPSQVLFDGFTKKKFADRTVESFAVFKDGITPEWEDPENKRGGEWSIRKEIGSEALDEFWDKLVLGAIGETIDPGNEITGVRVIHKNKRDKKEPGNNYRFEIWLRTLD 161
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Match: A0A6G0XM37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM37_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.290e-47 Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 1 WGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTA 399
+ D++ L F TVE+FW +NN+PKPSQV+FDG +KK DR + S+ +FK GI+PEWE P N GGEWQ K+ LD W+ +VLG++GET+D +EI GARV+ K+K + + YRFELWLRS D N A
Sbjct: 25 YADNLHKLCTFGTVEEFWSYWNNIPKPSQVLFDGISKKKFVDRAVQSFCVFKDGIRPEWEDPVNITGGEWQISLKLQAAELDETWDKLVLGMIGETIDPDNEITGARVIHKNKKDTHAYRFELWLRSRDRNLA 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16922.4946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16922.4946.1 >prot_Ecto-sp13_S_contig16922.4946.1 ID=prot_Ecto-sp13_S_contig16922.4946.1|Name=mRNA_Ecto-sp13_S_contig16922.4946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp MQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGback to top mRNA from alignment at Ecto-sp13_S_contig16922:509..2609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16922.4946.1 ID=mRNA_Ecto-sp13_S_contig16922.4946.1|Name=mRNA_Ecto-sp13_S_contig16922.4946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16922:509..2609+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16922:509..2609+ >mRNA_Ecto-sp13_S_contig16922.4946.1 ID=mRNA_Ecto-sp13_S_contig16922.4946.1|Name=mRNA_Ecto-sp13_S_contig16922.4946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16922:509..2609+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |