mRNA_Ecto-sp13_S_contig16915.4942.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A6H5L4K3_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K3_9PHAE) HSP 1 Score: 357 bits (917), Expect = 1.190e-121 Identity = 187/191 (97.91%), Postives = 190/191 (99.48%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCS DPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPD+FYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEV+
Sbjct: 27 RKLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCS-DPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDAFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVL 216
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A836CML5_9STRA (26S proteasome subunit like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML5_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.950e-63 Identity = 113/192 (58.85%), Postives = 143/192 (74.48%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELES-AETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLTVA+ +FV D AN++ G +RL T+F+A FEA++NQL+ QILCAV + ADP A L +ALEK RLGPE SLLL SELGL LR G KE + K K A+E+LE A+T+VHSA++ L+ EYYK VGPP++F+RSALM+LAYTPLE + + LATDISLAA+TG+GV+NFGEVV
Sbjct: 28 RKLWHQLTVAVYDFVQDDANSQ-GDSFIRLYTDFIAKFEARINQLKLAQILCAVARKF-ADPADAAALLSSALEKSARLGPEPSLLLSSELGLTNLRRGMAEGVKEQLAKDKAALEDLEGVADTSVHSAHHLLACEYYKGVGPPEAFFRSALMYLAYTPLESMAAERQQQLATDISLAAITGDGVYNFGEVV 217
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S1UCB7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCB7_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.700e-50 Identity = 98/193 (50.78%), Postives = 126/193 (65.28%), Query Frame = 1
Query: 4 RLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAE---AKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
+LWHQLT + EFV DP G V+L F+ FE +MNQLRF Q+L + K A+ A L T LEK+ RLG EA++ LE LGL L A+ A +++ + +VE L +T V S YY+LSS YYK VGPP+SFY+ ALMFL YTP+E +PQ ERYTLATD+SLAA+TG G++NFGEV+
Sbjct: 35 KLWHQLTDLVDEFVRDPETTR-GENKVQLYEHFICEFEGRMNQLRFAQVLTEICKL-QAETSDAVALITTTLEKQARLGQEATIYLECALGLFRLSTQSEADRALAAATIKEKRESVEGLGGDDTTVPSIYYQLSSTYYKLVGPPESFYKDALMFLVYTPMESVPQEERYTLATDLSLAAITGNGIYNFGEVL 225
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A4D9CV45_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV45_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.880e-48 Identity = 93/191 (48.69%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLTVALL F+ D N L L F+ FEAK+N LR ++ + K D A + EKRER G EA+L ++ E+ L LR G V E + ++ K+ +E L A+ V+SAYYR +SEY+K VGPP++FY++ALM+LAYTP+E + E+ TLA DISLAALTG+GVFNFGEV+
Sbjct: 28 RKLWHQLTVALLSFLKD-TNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARDFLQQFEEKRERYGSEAALFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVL 217
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7R9YAW4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW4_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.540e-47 Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 4 RLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVL---RAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
+LWHQLT + FV D ++ G V+L FV FE +MNQLRF QIL + K S P A L LEK+ RLG EAS+ LE LGL L G A +++++ + VE L + +T V S +YRLSS YYK VGPP+SFYR AL+FL +TP E +P E+YTLATD+SLAA+TG G++NFGEV+
Sbjct: 35 KLWHQLTDEVDSFVRD-SDTTRGENKVQLYEHFVHEFEGRMNQLRFAQILTEICKLHSETP-DAIALISATLEKKARLGKEASIFLECALGLFRLGNQNEGDQEAALQIIKEQRPEVESLSADDTTVPSIFYRLSSTYYKLVGPPESFYRDALLFLVFTPTEELPHEEQYTLATDLSLAAITGSGIYNFGEVL 225
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S2V5A0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A0_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.030e-43 Identity = 89/193 (46.11%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVLR-AGKVAEAKEVVEKGKVAVEELESAE-TAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLT + FVS +N++ L +L +F++ FE+K+NQL+F QIL ++ KT S L E RERLG EASLLL+ E+ L +R + +A A+ +VE G+ +E + +AE T VH Y+R ++EYY+ VGPP+ FY+S LMFLAYTP + + LA ++LAALTG+G+FNFGEV+
Sbjct: 27 RKLWHQLTEEISAFVSVVSNSKEDSFL-KLYRDFISTFESKLNQLKFAQILVSISKTLSDTTAGEGLLSEVLAANRERLGTEASLLLDMEVALFKIRQSSDLAGARALVESGREVLEGIVAAEDTVVHCTYFRAAAEYYQAVGPPEEFYKSGLMFLAYTPEGALEVDQARGLALALTLAALTGDGIFNFGEVL 218
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S2BH76_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BH76_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.520e-42 Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVL---------RAGKVAEAKEVVEKGKVAVEELESA-ETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLT L EFVS+ AN G ++L +F+A FE K+NQL F +I V + DP A +E LEKR RLG EA+L LE L L L RA +++ K+V+E + ++ LE +T VHS YY L++E++K GP +S+Y+ ALM LAYTP++ + + +LATD+SLAA++G+ V+NFGEV+
Sbjct: 40 RKLWHQLTSCLAEFVSNEANRR-GDNFIQLYQQFLAKFEGKLNQLEFAKIANCVALS-HEDPQAAVAFYEAMLEKRMRLGAEATLYLELLLWLYKLTSRAGDAGDRAKTLSDVKQVIESKRPELDALEGVMDTCVHSTYYHLATEFFKEAGPHESYYKHALMLLAYTPMDSMSAEQATSLATDMSLAAISGDSVYNFGEVL 238
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S2SAK9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAK9_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.030e-41 Identity = 86/201 (42.79%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADPLVATQLFETALEKRERLGPEASLLLESELGLLVL---------RAGKVAEAKEVVEKGKVAVEELESA-ETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
R+LWHQLT AL F+SD +N G V L F++ E K+NQL F +++ + ++ +P Q FE LE+R RLG EA+L LE L L L RA +AE K + +V V+ L+ + VHSAYY+L+++++K VGPP+++Y+SALM +AYTP++ + + LATD+SLAAL+G+G++NFGEV+
Sbjct: 53 RKLWHQLTAALSAFLSDDSNRR-GRSFVDLYENFISKIEGKLNQLEFAKMVGIIAQSFP-EPQATFQFFEATLERRNRLGVEATLYLEILLLLAKLTLAAPGVEERAATLAEIKGALTSKRVEVDALQGLMDPCVHSAYYQLATQFHKEVGPPEAYYKSALMLIAYTPMDSLKPEQALALATDMSLAALSGDGLYNFGEVL 251
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S0CIL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIL2_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.600e-40 Identity = 93/226 (41.15%), Postives = 121/226 (53.54%), Query Frame = 1
Query: 4 RLWHQLTVALLEFVSDPANAE------------------AGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCS-----ADPLVATQLFETALEKRERLGPEASLLLESELGLLVLRA-------------GKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
+LWHQLTV +L+FVS P + E + L V +AK+NQL QI V + + AD + A + E LEK+ RLG ASL L+S+L LL LR G + + +V ++ S VHSA+Y S+ Y K VGPP++FY+ ALMFL YTP++ + ERYTLATD+SLAALTGEGVFNFGEVV
Sbjct: 13 KLWHQLTVEVLDFVSTPVDDENNPAATESNFTNLRTTSDGSNSYLALYDRVVLACDAKLNQLSLAQIASVVATSLASEGGGADVVAARAVLENLLEKKSRLGKAASLFLQSKLALLSLRMIPYDATQEQYESIGTMLRTETIVLNEELGDSSEGSGSAVVHSAFYEASTAYRKRVGPPEAFYQEALMFLNYTPVDSMTVEERYTLATDLSLAALTGEGVFNFGEVV 238
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Match: A0A7S2LPS4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LPS4_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.060e-39 Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 1
Query: 1 RRLWHQLTVALLEFVSDPA-----NAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSADP-----LVATQLFETALEKRERLGPEASLLLESELGLLVL----RAGK----------VAEAKEVVEKGKVAVEEL---ESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVV 573
++LWHQLT++ LEFVS P+ AE L + + + K+NQL +I V + DP + A + E LEKR+RLGP ++L E+ LGLL L R+G+ + KE + KG+ + EL ES VHSA+Y + Y K VGPP+++YR A+ ++AYT L + Q ERY +ATD+SLAALTGEGVFNFGEVV
Sbjct: 37 KKLWHQLTMSTLEFVSVPSATLRTTAEGINSYHALFEKVILPIDKKINQLNLARIASFVAFSLLDDPPYKDGVAARSILENLLEKRDRLGPASALYAEARLGLLGLTVLARSGEALTTESSVKALESTKEAITKGRSVLAELADTESEAAIVHSAFYETAMTYRKAVGPPEAYYREAIQYVAYTNLSELSQEERYNIATDLSLAALTGEGVFNFGEVV 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16915.4942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16915.4942.1 >prot_Ecto-sp13_S_contig16915.4942.1 ID=prot_Ecto-sp13_S_contig16915.4942.1|Name=mRNA_Ecto-sp13_S_contig16915.4942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MASADGRPAGVRFGPRERGGGGRSGAAVHGVRGKLRGEDESASIRADPLRback to top mRNA from alignment at Ecto-sp13_S_contig16915:324..2736- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16915.4942.1 ID=mRNA_Ecto-sp13_S_contig16915.4942.1|Name=mRNA_Ecto-sp13_S_contig16915.4942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2413bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16915:324..2736- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16915:324..2736- >mRNA_Ecto-sp13_S_contig16915.4942.1 ID=mRNA_Ecto-sp13_S_contig16915.4942.1|Name=mRNA_Ecto-sp13_S_contig16915.4942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16915:324..2736- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |