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|
Homology
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: D7FNU4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU4_ECTSI) HSP 1 Score: 604 bits (1557), Expect = 1.350e-205 Identity = 347/362 (95.86%), Postives = 356/362 (98.34%), Query Frame = 2
Query: 1229 VTNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWDKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLASPXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRTLAQAEAMLKDSGSTGRPAGSR 2314
V+NGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVD++RAIGRPVVIGFHRSGGGGKEAKGAGA AQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDW+KRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTA+SMGYNPYEARLMGNTAARAAISGAGDSGAGAPL SPXXXXXXXXXXXXXXXXXXTA++GE+EEWIGEEAAM DAVAAEIEGALGAVL QEPGVSLTAVTTMLKMMKNMTAKSS+DKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIR LAQAEAMLKDSGST RPAGSR
Sbjct: 22 VSNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDVVRAIGRPVVIGFHRSGGGGKEAKGAGATAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWNKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTASSMGYNPYEARLMGNTAARAAISGAGDSGAGAPLTSPXXXXXXXXXXXXXXXXXXTANLGEKEEWIGEEAAMADAVAAEIEGALGAVLEQEPGVSLTAVTTMLKMMKNMTAKSSDDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAGSR 383
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: A0A7S2DP17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DP17_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.950e-19 Identity = 114/334 (34.13%), Postives = 169/334 (50.60%), Query Frame = 2
Query: 1217 VQSPVTNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWDKRLN-----KGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLASPXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQH 2203
VQS + A + GV+V I AIDGN P I+++ RPVV+ F G K KG + ++ GP P++A A RREA+LKAAESR WDK+L KGRQA K+ G + + +AE++R+ + A+ +E RT +GYNPY++++ + XXXXXXXXXXXXXXXXXX + + ++ G ++ ALG + +Q P ++ AVTT+LK++ N+ K ++K R+R+ N F KV ++GG++ M AAGF+L D +E VL +
Sbjct: 64 VQS-IGRNSEALRHGVQVGHRIVAIDGN--PIKFSQFSSFIQSMPRPVVLTFQ--GVAKKPKKGPMSVLKKKGPD---------------------PLSARENAIRREASLKAAESRGNAWDKKLGATRREKGRQAQAEKASMGANNDAEM----SAESKRVFDAARAKETRTTNELGYNPYQSQISSSXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXSSLSQQASPHGAGDPFDSFTVEAMDMALGLISSQPPQIAKEAVTTLLKLLNNLETKFEDEKVHRVRVANKTFAKKVASVNGGIDFMVAAGFTLTEDAEETVLVY 359
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: A0A4D9D7Q3_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7Q3_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.450e-15 Identity = 100/367 (27.25%), Postives = 155/367 (42.23%), Query Frame = 2
Query: 1217 VQSPVTNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGP---PQPPPMTAEAKAERREAALKAAESRTKDWDKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGA----------PLAS-----PXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQ-HGPCDPVPLRLTVAIRTLAQ 2260
V + +GGAA++ GV + D + ++DGN ++E L + A+ RPV FHRSG ++ P P PP ERR L AAE R++ WD+++ + + S G ++F + + T+ V K EA A++GYNPYE+ M A A I AG + +G+ PL S P A + +EE E+ E + A+ +L + A +T+L ++ N+ A + +KF+R+RL NA F SKV + G ++++ AAGF + E L GP VPLR V + Q
Sbjct: 71 VVGSLVSGGAASRKGVHIGDIVISVDGN-PVTSYESLEVALCAMERPVTFSFHRSG-----------------------------TSDLVQPVAHPTLPPSDESGDVERRRRILTAAEERSRAWDRKVQRAGGNHRGTSKKSGEGLDRFGANDDEATKAQVAQIKNFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPLVAPLSQEEL----ESPEAFQAGEEADSAMALMLDRPSPAWRAAASTVLTILGNVLADPAHEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFGYTMEDQETFLSLPGPALEVPLRARVIYYRIQQ 403
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: A0A7S3JPU7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPU7_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.330e-11 Identity = 70/228 (30.70%), Postives = 106/228 (46.49%), Query Frame = 2
Query: 1523 KAERREAALKAAESRTKDWDKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLASPXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVSL--TAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQ 2200
K RR A KAA R W++R+ Q + + V+ + + N ETR E A Q+ A +GY+PY+ L G +A+ + S T G +E + D + E++ AL A+ + + G V T+LK++ N+ K+ E KF+R+RL NAN +K+ I+GGLE++ AAGF LQ DGDE +LQ
Sbjct: 144 KEARRVAQAKAALERDGAWNRRVASRPQGGKLANTRNPVSSTEEANLSNPETRAAWEAAAQRHAEQTRELGYDPYKPLLTGTSASSQSAS----------------------RPPPQKKDEGTRLGGNDE------SKDYDTASTEVQVALQALASSDKGTEAQEACVATLLKLLDNVLNKTDE-KFRRVRLANANIQAKILEIEGGLEILIAAGFQLQPDGDETILQ 342
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: A0A7S2US51_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US51_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 8.270e-11 Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 2
Query: 1952 AAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEP 2191
A E+E A+ ++ Q S+ A+ T+ K++KN+ E+KF+RIRL N FNSKV I GG+E+M A GF++ T G+EP
Sbjct: 4 AGEVEDAIAILMGQGLDASVNAMKTVSKLVKNIIKTPEEEKFRRIRLNNQAFNSKVVSIQGGMELMQAIGFNVDTTGEEP 83
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: K3X842_GLOUD (PUB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X842_GLOUD) HSP 1 Score: 70.1 bits (170), Expect = 5.710e-9 Identity = 77/253 (30.43%), Postives = 113/253 (44.66%), Query Frame = 2
Query: 1490 PPQPPPMTAEAKAERREAALKAAESRTKDWDKRLNKGRQASQTKSGTGGVTENQFEDSG-------------------NAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLASPXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFS-LQTDGDE 2188
P PPP+T E + RREA LKA ESRT WDKR+N R+ + +AE + E+ Q A +G+NPY A +T A ++ A XXXXXXXX AD + E G GA+ +L Q+P ++TA T++KM+ N+ +E+K+++IRL NA+ SK+ ++G E++ AGFS + DG+E
Sbjct: 68 PAAPPPLTEEEQKARREAQLKAVESRTNAWDKRVNNARKVRMQQEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVLSAEEMKAFEIQNAQ-----AQVGFNPYAATFSSSTEASTVMNSISSGAAPXXXXXRVAXXXXXXXXSSFPAIPPAADPSMDLEPNGT-------------GAVYVLLRQDPVRAITAAETIIKMLNNIQNNPTEEKYRKIRLSNASIQSKLVAVNGAAEILEEAGFSKIVIDGEE 302
BLAST of mRNA_Ecto-sp13_S_contig169.4930.1 vs. uniprot
Match: A0A812WM39_SYMMI (PUX2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WM39_SYMMI) HSP 1 Score: 68.2 bits (165), Expect = 7.560e-9 Identity = 60/179 (33.52%), Postives = 82/179 (45.81%), Query Frame = 2
Query: 1697 AKQQEARTAASMGYNPYEARLMGNTAARAAISGAGDSGAGAPLASPXXXXXXXXXXXXXXXXXXTADVGEEEEWIGEEAAMVDAVAAEIEGALGAVLAQEPGVS--LTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGD------EPVLQHGP 2209
AK+ E RT S+GYNP++ N++ + +G+ AS A V E +G EA A++ AL + E S +T V T +KM+ N+ +E KF+ IRL N NF SKV ++GGLEVM AAGF L D E L+HGP
Sbjct: 35 AKESEQRTVESLGYNPFQPHFSSNSSEVRHQVNSATAGSSISAASSSAKLRPSQREEGGDREGELALV---ESQVGPEAV------AQLNEALFELAYGEADASSRMTCVDTAMKMLANIQRNPNEIKFRCIRLSNVNFRSKVAEVEGGLEVMMAAGFELSQGADGGEEDNETYLRHGP 204
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 75.1 |
| Seed ortholog evalue | 8.7e-11 |
| Seed eggNOG ortholog | 65071.PYU1_T013391 |
| Preferred name | UBXN6 |
| Model size | 3173 |
| KEGG ko | ko:K14011 |
| KEGG Pathway | ko04141,map04141 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000323,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0005938,GO:0006508,GO:0006807,GO:0006810,GO:0006914,GO:0006950,GO:0006952,GO:0007034,GO:0007041,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009620,GO:0009966,GO:0009967,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010647,GO:0012505,GO:0016020,GO:0016192,GO:0016197,GO:0016236,GO:0019538,GO:0019898,GO:0023051,GO:0023056,GO:0030111,GO:0030163,GO:0030177,GO:0031090,GO:0031410,GO:0031901,GO:0031902,GO:0031982,GO:0032509,GO:0032510,GO:0032991,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045177,GO:0045179,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0060828,GO:0061919,GO:0065007,GO:0071704,GO:0071944,GO:0071985,GO:0090263,GO:0097708,GO:0098542,GO:0098588,GO:0098805,GO:0098852,GO:0099568,GO:0099738,GO:1901564,GO:1901565,GO:1901575,GO:1901698 |
| Exons | 7 |
| EggNOG free text desc. | Source PGD |
| EggNOG OGs | 1MBV9@121069,KOG2699@1,KOG2699@2759 |
| Ec32 ortholog description | PDZ domain |
| Ec32 ortholog | Ec-12_003340.1 |
| Cds size | 1263 |
| COG Functional cat. | O |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462885.2839186-UTR-Ecto-sp13_S_contig169:9262..10118 | 1681462885.2839186-UTR-Ecto-sp13_S_contig169:9262..10118 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig169 9263..10118 - |
| 1681462885.3774188-UTR-Ecto-sp13_S_contig169:14828..15882 | 1681462885.3774188-UTR-Ecto-sp13_S_contig169:14828..15882 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig169 14829..15882 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462885.2948434-CDS-Ecto-sp13_S_contig169:10118..10200 | 1681462885.2948434-CDS-Ecto-sp13_S_contig169:10118..10200 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 10119..10200 - |
| 1681462885.3042674-CDS-Ecto-sp13_S_contig169:11085..11177 | 1681462885.3042674-CDS-Ecto-sp13_S_contig169:11085..11177 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 11086..11177 - |
| 1681462885.313265-CDS-Ecto-sp13_S_contig169:11560..11710 | 1681462885.313265-CDS-Ecto-sp13_S_contig169:11560..11710 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 11561..11710 - |
| 1681462885.327311-CDS-Ecto-sp13_S_contig169:12238..12460 | 1681462885.327311-CDS-Ecto-sp13_S_contig169:12238..12460 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 12239..12460 - |
| 1681462885.3455572-CDS-Ecto-sp13_S_contig169:12857..12992 | 1681462885.3455572-CDS-Ecto-sp13_S_contig169:12857..12992 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 12858..12992 - |
| 1681462885.357543-CDS-Ecto-sp13_S_contig169:13775..13913 | 1681462885.357543-CDS-Ecto-sp13_S_contig169:13775..13913 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 13776..13913 - |
| 1681462885.3672428-CDS-Ecto-sp13_S_contig169:14384..14828 | 1681462885.3672428-CDS-Ecto-sp13_S_contig169:14384..14828 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig169 14385..14828 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig169.4930.1 >prot_Ecto-sp13_S_contig169.4930.1 ID=prot_Ecto-sp13_S_contig169.4930.1|Name=mRNA_Ecto-sp13_S_contig169.4930.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=421bp
MRFGGAIMVAEQDKDEPILESVTRRNRRHTPTIVVRSPSWFTRRCRRRRR
RPLRVQSPVTNGGAAAKAGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGR
PVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPP
PMTAEAKAERREAALKAAESRTKDWDKRLNKGRQASQTKSGTGGVTENQF
EDSGNAETRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGD
SGAGAPLASPPPPDGRATTPPPAAAAAATADVGEEEEWIGEEAAMVDAVA
AEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNAN
FNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRTL
AQAEAMLKDSGSTGRPAGSR* back to topmRNA from alignment at Ecto-sp13_S_contig169:9263..15882- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig169.4930.1 ID=mRNA_Ecto-sp13_S_contig169.4930.1|Name=mRNA_Ecto-sp13_S_contig169.4930.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6620bp|location=Sequence derived from alignment at Ecto-sp13_S_contig169:9263..15882- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTTGAGGTGACCTTCGTGGAGCAGCATCTGGGCATTTCGTTATCGCCAG
GCCCAAACGGAGAGTCTCGGGTCACCGGAGGTGCGCAATACAGCAGTTAC
AGCGTGAAGCTGGCAACGACAGTGTTGCGATAGGCGGTTGCGGGCGAAGA
GGAGAACGGTTTGCTGCGTTCTTGCACTGCCATGTGGCTTTTAGCGCAGC
TAGCCAACAGCCAATATACAAACGGGAGTGCACATCTTTCTTTCGGGCGA
CATGGCGCGAGGCCGCAAGAGAGTTTGCCCGAATCCCTGGGGTGTTCCGC
AGCACGTTCTTTTCGCCAAAATTCCCACTCCCAACACAGCACTATGCGCA
TATCCTTGAAATATGTTGTACACTGCAGTAGGTGCGCCTTGTTCAACGTT
TTTCCTTGGAAGGTATCAGGCGTTGTGTTCCCCCTCTCAAGGTCAAGGTA
GATCGTGACTGCAACAATCGCGAGAGCTCCGGGTTTCAAGCGTGGAAATT
GTTTCCATCCTTGTTCTCGCCCGAAAGTCGCGCTTGAGGCACCCACCATC
AACGAAGAGGAATAGTTAACCTGCTCTGCTCTCGGAAACCCTACTACGTC
AGTGCTGCAGTAACATTGTGTGCAGACTAACCGCACCATGTTTTCGTGTG
TGTTCACGCAGCAAGCAGCAACCTGCATCCTTCCAGGCTGTAATGGCGCC
GTGCGGCCCAAACGACGTCGGCGCGCGCCGTCGCTCGGGTGCAGCCGGCC
TGGTGTTCGTTGTACCTGGGTTCCAACCGTCATATGAATCTTGTTCCGTG
TGGAACACGAACCCTCCACGGTTTTCTGAGGAGGCTGTTTTCTAGCGGCA
GTTCGCACGAACTCGCGTATCTTCGTCGAGGACACGAGTTTGTACTTGTA
CCCGAAGAGAGCACTACCTGACGGCCCCATCCCTGAGCCTTGCGTTGGGA
TATGCATATCCTTCGGTCCGTTCCACGTCCCGGATAGGTTCCCTGTGCTG
TAATGCCAGATACTTTGTACCCGAGTACAAGTCAAACACGGGGACTAATT
TCCGATGCGGTTTGGCGGGGCAATTATGGTAGCGGAACAAGATAAGGATG
AACCAATTCTGGAGTCGGTCACGCGACGAAACCGACGGCATACCCCCACC
ATCGTGGTTCGCTCGCCATCGTGGTTCACTCGCCGTTGCCGCCGCCGCCG
CCGACGTCCGCTTCGTGTCCAATCACCAGTGACCAACGGCGGAGCGGCAG
CAAAGGCCGGCGTGCGCGTGAACGACACAATAGCAGCCATCGACGGGAAC
GCGTCCCCCGCCGCCCACGAAGACCTGGTCGACATCATCCGTGCGATCGG
CCGACCTGTGGTGATCGGGTTTCACAGGTCGGGTGGCGGTGGGAAGGAGG
CGAAGGGTGCCGGGGCGAGGGCCCAGGAACCGGGGCCCTTTCAGCGCGCG
CAAGACGCTGCTAGGCGGAAGATGGACGAGATTAAGGGTCCGCCACAAGT
AAGGAGGAGGTCGCAGGGGGCCGGGAGGCCTGGTGCGTGCGTTTTGACTA
TTACTTGGAAGTAATGATGTTGCCCTTAGATCAATTGATCGACCTTGATC
GTCGTTCCCGGTCTGCCCGAAGGTGGAGTTGGCGACGTGGCGGGATTTGC
GATGGTTGGGAGGCCTTGGGTGCCACCTCTTGACCTGCGGGTAGTTCCTA
GGTCAACGGGTGCGTCGAATTCGGCAGGTTGGAGGAGCTTCCCCTTGCGT
ATCCGGCTGTTGAGATCGCCGTGCGCTTGTTGTTGCAGTTGTTGTTGTTG
TCATCGGTGGTTGTATCCTCCTCGTCATGCCGTGTTTGTTACATGATCTT
GTGGTTGTTGTGGTTGGATGTTGTCCCCGCCTCCGTGTTTGTTCGTATTG
ACTGTCATCGTTGATTGAGGTCACTTTGTTTTACCATGCCCCCATCATCT
CCCCGCCCCGAAATTTCAGCCACCGCCGATGACGGCCGAGGCGAAGGCAG
AGCGGAGAGAAGCCGCTCTGAAGGCGGCCGAGTCACGAACCAAGGACTGG
GACAAGCGACTCAACAAGGGTCGCCAGGCGTCACAGACCAAGTCTGGGAC
CGGTGGGGTGAGAGCCGCGCTGTTCGGCGATGCGATGCGGGGTGTTACCG
CCTTTGTCGGCATTCTCCCTTCGTGGTTTTCTAGTTAACAACGAATGCAC
GAAATCATTGAACTGGATTGTGTCGCAGCAGTGGCACGCCGCACCGATGT
TGTTGCTGCTTTCTGCCGTTGGTGGGGACATTTCTTTAGACTAAGGTGCT
TGGTGCGACCTGCCTGCAAAGGAGATTGATGGGGCGAGTGAACGCAATTT
CTTGAAAAGCAAACGGCAACGTACGTTCATGCCGTGCGTGTTTTTTTTTC
TTGCGCACACCACGCAGCAGTGAATCAGGTGTCCGGATCTCACGATGCCC
GATGCACAGGTCTAGCTCCAAAGGTCGCCTTCCTTTGAAAGGATCTTCGT
TACGCTTGAGCAAGTCGGCCAGCTGCTCATGGTTACCGCTTGATCTCGAT
CCTTCATGTAACGTGGTTCGCCATGGAAACCTTACTGGATACCACATGGC
AAATGATTGCGTGCACCCCGTGTGCGTGAAAGATTTATTCACAATTTGAC
TTTCGATGAAATGAGCTCGTGGTCCGCGTCCAACACGAGACGGAACGCCT
GCGAGTGATTTCTGGACCTTAAGATTGGCTTAAAGCCAAGGAATAGGCAG
TAGGCACAGGACCGGCGCTCAATAACTACTGTTCAAGCAGCAACACAATA
CGTTGTCGAAAGGAAGAGGTCCAATCGAATCAACGCAAGGAACGTCGGGA
TTTGGCGCGCGTGTGTTCGTTGTACGAAAAACGTACACAGGTGACCGAAA
ACCAATTCGAAGATTCGGGCAATGCCGAGACTAGGCGCATGGTCGAGCTC
GCGAAGCAGCAGGAAGCTAGGACGGCGGCTAGTATGGGCTACAACCCGTA
CGAGGCCCGTCTGATGGGCAACACGGTGAGATGGATGGATGAATACGCAG
ACAGAGAGACAGACAGACAGGTTGTGGCATGACATGTATTGGCACAATTA
CGCTCATTGACGATGCGCAGAGAGAGAGAGAGAGAGGCGTGTGTGTGGAT
AAAGGCAACCACGTTCTCCTTGTTCTTTTTGGTTGCGGTCACCGGCCCGA
GACTTGGATGGGTGTGTCTCCAACCAGCGAGTCTCTCTACGGTGAATCAC
CTTGTTTTCTGCCTTACCAGGCCGGCACTCTCGTACGCCTTGCGTGCGTG
CGCGTGGCAGCTGCAGACCTGTGTGCCTCTCGATCGTATGGTATTTGCGG
CAGCGGGCGGATCGACGTCGTTTCGTATAGCGCGCGCAACTTTCACGTCT
TTCTTTTGCTTTGTTTTTGCAGGCGGCACGGGCGGCTATTTCTGGGGCCG
GTGATTCAGGGGCTGGGGCGCCTCTTGCATCTCCGCCGCCTCCCGACGGA
CGAGCAACAACACCACCACCGGCGGCGGCGGCGGCGGCAACCGCAGACGT
GGGAGAGGAGGAGGAATGGATCGGAGAGGAAGCTGCCATGGTGGACGCTG
TCGCGGCAGAAATTGAGGGGGCGTTAGGAGCGGTTTTGGCGCAGGTGTGT
CGGCGGTGGTTGGGGGCGTGTTTGTTGGGTACGAGAATGTTTGACGGGAG
AATGAAGGGGCTGTGTATCTGTGCTGCGGCCTACTCGTTGGCGCTACCAT
GTTTTTTTTCTGCATGTGTCTGTGCTGTCGTATGTGTTGGTGTCGTCATT
CATTCATTGATTGATGGTGCTGTTGTGTCTTCTGTCTGTTGTGTTTTTTT
AGGTGTTTACGGTTTGGTTTTGATGGTCGTTTAATACGCTTGTTCCCCCG
ACAAGGCACACACGGCAACTTGCACAAGTGACCTTTTTCTAAGAAGTGGA
GTATCGTAAGGCGTGGCACCGTTCGCCGTTTTCGTTATCTCTCCTTCACT
TTCAATTTCGCACTGCATTGTTTCTGTGGTCTGTCAGAATCGATCCATGT
CACTGACGGATGGCTCTTTCTCACAATTTGACGGTCATGTGAGGTAGAAC
AGCATGTGCCCGCATCGACCCGTTTCTATCATGCCTTTGGCCTGATCTCC
ACATTGCTTCCATCTGACACAGGAACCGGGGGTGTCGCTGACTGCCGTGA
CAACGATGCTCAAGATGATGAAGAACATGACGGCCAAGTCGTCCGAGGAC
AAGTTCAAGAGGATCCGCCTCGGCAACGCCAATTTTAACTCCAAAGTCGG
CGGCATTGACGGAGGACTCGAGGTCCGTCAGTCAGCCAGTCAGCCTGTTT
CTTTGTGATTTTAAATTGTTGCAATTGTGGTGAAATTGGACCATTTGTTG
ATGCGGTATTTCTTCCACAACGTGATGTAAACTCAGGAGGCCGAGTCTAA
CAGTCACCCACCCGCGCACTCCATGAAGCAGGTTCAGCCTTTGCGTAAGT
AGCCTGCGACACAGACCCACATCCGCGCTACACGCAGAGCAATATCAAGG
CAGTATTTATCGCGGCTGTTCCACGTTGACGAAGGGCATTCGCCACTAAC
GAAAAAGCAGGAACCATGACACTCCTCGCTCCACACGAAGAAGACCGATA
CGCTCTCAGCAGGACATATTGACATGCACGTGCGCATCCGATCAAAATCG
AGCAGGTGATGACGGCGGCGGGATTCTCGCTCCAAACAGACGGGGACGAG
CCAGTCCTCCAACACGGCCCGTGCGACCCGGTCCCTTTGAGACTCACGTG
AGTGGTTGGTGGATGAAGTGGTAGTGGTAGGGCCGGCAATCTGCCGACAG
CAGCTTTTCTTGAGTAGCTGGATGGATGAGCATGGAAGCAAGCGAATTCC
TGCTGCTGTTGTTCGGTCGAGTGAGAGACCATGAACATGCACGAGAACGA
TTGTTTGCTGGTGAACCCATGTTGCGAAGGAAACGCTGAGATTCGAGCTG
ACGCGGTGTTTTTCGAGGTGCCCGAAGAGAAGCATATCAGCCTACACGTG
AGCACATGTTCTCTGCTTTCTTTCACTGAAAGATAAGCACCGAGATTCCG
GTGTTTGTGGGGTAGGCGTAGCGCCGCCCATCCCGACAAATGCTTCACGC
AACTGTGACCGTATCAAAGAATGTCGATGGTCGTGGCAAGAATCCATTCG
TATGGCATGTAGGCCTGTCGCCCAGGTGACCGAGGCGGAAATATTGAAGC
CCATTGGGCTGATAGGGCCGGAAATCTCTACTCAGCGAGGTCATTTGTCC
CACAGTCCGTACTTTTTAATAGTGATGGGATGCGCTTGTTCGTGAGAATG
CGTTGGGGCAATAAGCCAAGTTTCGCTGGCTCCCTCACAAGCCATCGATC
ACCAGTGCCATCTCTTCCTGCTGTTTTACCAACATCATCAGCATGTGTAT
TGTCCTTGACTACCACACAGAGGGAAACAAACCTACGTAGGTTGTCAATG
ACAAAAAAAAAGCGTACTTGTTGGTCGTCAGGTTGTTTACTGTGCTCGAT
GCTATAATATCACTTTCATTCACTCCAGCTGTTGTCCGTCTCTCCCCCCC
GCCCCGTTTTTACCGCACCTCTCGCTCTGGTGACAACCCGACTGGACATC
TGCATGGCTTCCCTCGATTCCACCGCTGTCAGCGTGGCAATACGCACGCT
CGCCCAGGCGGAAGCAATGCTCAAAGATAGCGGCAGCACCGGGCGTCCCG
CGGGATCCCGTTGAACTTTGTTGGAAGAGTCTTGCACCTACTCTGGAATG
TTGGTGTCCCTCACTTCGATATTTTGACGCTTGGAAAGTGTTATGGTTGT
CGTAGGTGATGAGACCGCATAAATGGCAAGTCTCTTTGGGAGAGATCCGC
GAATCGGTAACTGCCACGGGGATTTGATTCGCGCTTTCGCGGGAGTTGCC
ATATGTATGATGGCGTGTTGCGTTTTCTTGTTGCACAGGAAGGTATTTTT
TATCAATATCGTGGTCGTTGGTGCGGATTTTGTGTTTGTGTTTGTGAACG
GTGATGGTTGTTTGTCGGAGGGGGTGGAGAAGAATGTATTTCAGCAACAC
ACCGTTGCCACTCACTCCTTTTCGTCCCGCCAATGCATGCCGGTGAAGAT
CAACCCTGTTTGGTTTGGCAAGTTCATGTACGAAACCTGCCAACTCTCAA
ATATTTTCCATTGCTAGTTTTCACAGGTTTTTGGCGAACATCAGCTTCAC
GCTTGTAGTCATTTCATTTTTGCAAGTTGATCTGGGAGCGGTGGGTGCCT
TGTGGAGTACACGCGAAGTGAAAGACAGCGCGCCTTGGCGCGGCGCGTAC
ACTTGTGATGTAAAGATGTTAGCCGGATCACACGCGTACAAATGAAAGAG
TGAAGATGGTGACTTCCCCTTGCAGAGCTTCTTCGCCTAGAACAGGGCAA
TGATGCGCGGTGTGTAGGTTTCCAGCCGCGTTGTTCAGGGAGCATTCCTT
ACGCGATGAAATCTGCAAAAAGAGCCTTTCAGCCAAGTTGCCCCCATCAT
TCGGTTGGTTGGATCAGTAAACCCACGGCCGATTTGTGGCACTGCCGCAT
GACCAAGGCATCGTTTCACT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig169:9263..15882- >mRNA_Ecto-sp13_S_contig169.4930.1 ID=mRNA_Ecto-sp13_S_contig169.4930.1|Name=mRNA_Ecto-sp13_S_contig169.4930.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp13_S_contig169:9263..15882- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTTTGGCGGGGCAATTATGGTAGCGGAACAAGATAAGGATGAACC
AATTCTGGAGTCGGTCACGCGACGAAACCGACGGCATACCCCCACCATCG
TGGTTCGCTCGCCATCGTGGTTCACTCGCCGTTGCCGCCGCCGCCGCCGA
CGTCCGCTTCGTGTCCAATCACCAGTGACCAACGGCGGAGCGGCAGCAAA
GGCCGGCGTGCGCGTGAACGACACAATAGCAGCCATCGACGGGAACGCGT
CCCCCGCCGCCCACGAAGACCTGGTCGACATCATCCGTGCGATCGGCCGA
CCTGTGGTGATCGGGTTTCACAGGTCGGGTGGCGGTGGGAAGGAGGCGAA
GGGTGCCGGGGCGAGGGCCCAGGAACCGGGGCCCTTTCAGCGCGCGCAAG
ACGCTGCTAGGCGGAAGATGGACGAGATTAAGGGTCCGCCACAACCACCG
CCGATGACGGCCGAGGCGAAGGCAGAGCGGAGAGAAGCCGCTCTGAAGGC
GGCCGAGTCACGAACCAAGGACTGGGACAAGCGACTCAACAAGGGTCGCC
AGGCGTCACAGACCAAGTCTGGGACCGGTGGGGTGACCGAAAACCAATTC
GAAGATTCGGGCAATGCCGAGACTAGGCGCATGGTCGAGCTCGCGAAGCA
GCAGGAAGCTAGGACGGCGGCTAGTATGGGCTACAACCCGTACGAGGCCC
GTCTGATGGGCAACACGGCGGCACGGGCGGCTATTTCTGGGGCCGGTGAT
TCAGGGGCTGGGGCGCCTCTTGCATCTCCGCCGCCTCCCGACGGACGAGC
AACAACACCACCACCGGCGGCGGCGGCGGCGGCAACCGCAGACGTGGGAG
AGGAGGAGGAATGGATCGGAGAGGAAGCTGCCATGGTGGACGCTGTCGCG
GCAGAAATTGAGGGGGCGTTAGGAGCGGTTTTGGCGCAGGAACCGGGGGT
GTCGCTGACTGCCGTGACAACGATGCTCAAGATGATGAAGAACATGACGG
CCAAGTCGTCCGAGGACAAGTTCAAGAGGATCCGCCTCGGCAACGCCAAT
TTTAACTCCAAAGTCGGCGGCATTGACGGAGGACTCGAGGTGATGACGGC
GGCGGGATTCTCGCTCCAAACAGACGGGGACGAGCCAGTCCTCCAACACG
GCCCGTGCGACCCGGTCCCTTTGAGACTCACCGTGGCAATACGCACGCTC
GCCCAGGCGGAAGCAATGCTCAAAGATAGCGGCAGCACCGGGCGTCCCGC
GGGATCCCGTTGA back to top
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