mRNA_Ecto-sp13_S_contig16892.4925.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: D7FQ76_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ76_ECTSI) HSP 1 Score: 182 bits (461), Expect = 2.070e-51 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKICSQDPRP 258
TRSRVVKLGDFGIAKVLGSTFDLA+TAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKICSQDPRP
Sbjct: 140 TRSRVVKLGDFGIAKVLGSTFDLARTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKICSQDPRP 225
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A835Z4W0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W0_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.640e-42 Identity = 71/86 (82.56%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKICSQDPRP 258
T SRVVKLGDFGIAKVL +T D A+TAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEM LRHAFEGN+MR LV KIC P P
Sbjct: 140 TMSRVVKLGDFGIAKVLANTMDHARTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMAALRHAFEGNDMRQLVAKICRGQPAP 225
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A7S1G592_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G592_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.560e-34 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKICSQDPRP 258
T S +VKLGDFGIAKVL +T LAKT+IGTPYY+SPEICQEK+YN+KSD+WSLGCVLYE+ LRH FEG NM+ LV KI RP
Sbjct: 137 TSSNMVKLGDFGIAKVLSNTMQLAKTSIGTPYYLSPEICQEKKYNNKSDIWSLGCVLYELASLRHPFEGRNMKDLVRKIIRGVYRP 222
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A7R9VJ84_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VJ84_9CHLO) HSP 1 Score: 125 bits (314), Expect = 4.440e-34 Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 1
Query: 13 VVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKI 237
++KLGDFG++KVL STF LA TA+GTPYY+SPEICQ K+YN KSD+WSLGC+LYEMT L+HAFE NMR+L+ KI
Sbjct: 41 LLKLGDFGVSKVLSSTFQLAATAVGTPYYLSPEICQNKKYNQKSDIWSLGCILYEMTTLKHAFEAQNMRMLLQKI 115
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: UPI000C03DB2D (serine/threonine-protein kinase Nek5-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03DB2D) HSP 1 Score: 121 bits (303), Expect = 1.380e-33 Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKI 237
T++ +VKLGDFGIA+VL ST +LA+T IGTPYY+SPEIC+ K YN+KSD+WSLGCVLYE+ L+HAFE NM+ LV+KI
Sbjct: 40 TKNGIVKLGDFGIARVLHSTMELARTCIGTPYYLSPEICENKPYNNKSDIWSLGCVLYELLTLKHAFEAGNMKNLVLKI 118
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A452EYV0_CAPHI (NIMA related kinase 5 n=1 Tax=Capra hircus TaxID=9925 RepID=A0A452EYV0_CAPHI) HSP 1 Score: 123 bits (309), Expect = 2.450e-33 Identity = 54/76 (71.05%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 13 VVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKIC 240
V KLGDFGIA+VL +T +LA+T IGTPYY+SPEICQ K YN+K+D+WSLGCVLYE+ LRH FEGNN++ LV+KIC
Sbjct: 63 VAKLGDFGIARVLNNTMELARTCIGTPYYLSPEICQNKPYNNKTDIWSLGCVLYELCTLRHPFEGNNLQQLVLKIC 138
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: D8U9H8_VOLCA (Protein kinase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U9H8_VOLCA) HSP 1 Score: 122 bits (307), Expect = 2.780e-33 Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 13 VVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKIC--SQDPRP 258
++KLGDFG++KVL STF LA TA+GTPYY+SPEICQ ++YN KSD+WSLGCVLYE+ L+HAFEG NMR L+ KI S P P
Sbjct: 69 LLKLGDFGVSKVLNSTFQLATTAVGTPYYLSPEICQNRKYNQKSDIWSLGCVLYELATLKHAFEGPNMRALISKIIKGSYTPMP 152
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A7S0PHH9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PHH9_CAFRO) HSP 1 Score: 125 bits (313), Expect = 3.480e-33 Identity = 56/75 (74.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 13 VVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKI 237
VVKLGDFGIAKVL +T +LA+TAIGTPYY+SPEIC+E+RYN+KSD+WSLGC+LYEM L+HAFEG NM+ LV I
Sbjct: 155 VVKLGDFGIAKVLSNTMELARTAIGTPYYLSPEICREERYNNKSDIWSLGCILYEMCSLKHAFEGRNMKQLVQSI 229
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: A0A7S1G4F6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4F6_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.550e-33 Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKI 237
T+ VVKLGDFGIAKVLG T D A T IGTPYYMSPE+C+++ YN KSD+W+LGCVLYE+T L HAF+GNNM LV+KI
Sbjct: 145 TKDNVVKLGDFGIAKVLGGTADYANTVIGTPYYMSPELCEDRPYNRKSDVWALGCVLYELTTLNHAFDGNNMCALVLKI 223
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Match: S4RQ96_PETMA (Protein kinase domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RQ96_PETMA) HSP 1 Score: 125 bits (313), Expect = 4.640e-33 Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 1
Query: 1 TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMWSLGCVLYEMTCLRHAFEGNNMRLLVMKI 237
T++ +V+LGDFGIA+VL ST +LA+T IGTPYY+SPEIC+ K YNHKSDMW+LGCVLYEM LRHAFE NM+ LV+KI
Sbjct: 137 TKAGIVQLGDFGIARVLNSTTELARTCIGTPYYLSPEICENKPYNHKSDMWALGCVLYEMCTLRHAFEAGNMKNLVLKI 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16892.4925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16892.4925.1 >prot_Ecto-sp13_S_contig16892.4925.1 ID=prot_Ecto-sp13_S_contig16892.4925.1|Name=mRNA_Ecto-sp13_S_contig16892.4925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp TRSRVVKLGDFGIAKVLGSTFDLAKTAIGTPYYMSPEICQEKRYNHKSDMback to top mRNA from alignment at Ecto-sp13_S_contig16892:2564..3805- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16892.4925.1 ID=mRNA_Ecto-sp13_S_contig16892.4925.1|Name=mRNA_Ecto-sp13_S_contig16892.4925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16892:2564..3805- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16892:2564..3805- >mRNA_Ecto-sp13_S_contig16892.4925.1 ID=mRNA_Ecto-sp13_S_contig16892.4925.1|Name=mRNA_Ecto-sp13_S_contig16892.4925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16892:2564..3805- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |