mRNA_Ecto-sp13_S_contig16727.4818.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16727.4818.1
Unique NamemRNA_Ecto-sp13_S_contig16727.4818.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: D7FPX8_ECTSI (SAM-dependent methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX8_ECTSI)

HSP 1 Score: 565 bits (1457), Expect = 5.150e-201
Identity = 311/360 (86.39%), Postives = 321/360 (89.17%), Query Frame = 1
Query:    1 KEDLERCRSLAKKLGLALVMARQEQGVEEEEEHQGERGKAERLAGGPAQAGRDGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASA--SRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYVAPP 1074
            KEDLERCRSLA+KLGLALV+ARQE          GERG+ E LAGG A+A  DGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTG+RSKHQQGK+EQVVKAAALPKRRAATAAAD PL PPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERS VVAALVQDALDRARVGDDET R AASRMSLTVADSTEVLATA VGSS         A+   SRPDVVYLDPMFPQQKKGKK KSALVKKGMQMLQALLEEEDGAEGEKRQQG EPGG TPDG GGGDV+GEGEAGAVE QEEERRLFDIAM+FATRKVVVKRPVHGPS+VRHVQPSHAVVSKNGRFDVYV PP
Sbjct:   11 KEDLERCRSLAEKLGLALVVARQEXXXXXXXXXXGERGEGEMLAGGAAEAEPDGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGYRSKHQQGKTEQVVKAAALPKRRAATAAADEPLGPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSSVVAALVQDALDRARVGDDETARKAASRMSLTVADSTEVLATAVVGSSSSSSAPVARAAVGFSRPDVVYLDPMFPQQKKGKKKKSALVKKGMQMLQALLEEEDGAEGEKRQQGTEPGGRTPDGAGGGDVSGEGEAGAVEGQEEERRLFDIAMEFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 370          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A6H5JS05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS05_9PHAE)

HSP 1 Score: 569 bits (1466), Expect = 4.070e-200
Identity = 308/360 (85.56%), Postives = 323/360 (89.72%), Query Frame = 1
Query:    1 KEDLERCRSLAKKLGLALVMARQEQGVEEEEEHQGERGKAERLAGGPAQAGRDGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASA--SRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYVAPP 1074
            KEDL+RCRSLA+KLGLALV+ARQEQGVEEE++HQGERGK +RLAGG A+A RDGFKFTM FDETG LALGQPGSGFNPL+VDFCGGKTGHRSKHQQG++EQVVKAAALPKRRAAT AADA LRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRV+MFERSPVVAALVQDALDRARVGDDET RTA SRMSLTVADSTEVLA A VGSS         A+   SRPDVVYLDPMFPQQ+KGKK KSALVKKGMQMLQALLEEED AEGE  QQG E GG  PDG GGGDV GEGEAG VE +EEERRLFDIAM FATRKVVVKRPVHGPS+VRHVQPSHAVVSKNGRFDVYV PP
Sbjct:  157 KEDLDRCRSLAEKLGLALVVARQEQGVEEEKQHQGERGKGKRLAGGAAEAERDGFKFTMFFDETGCLALGQPGSGFNPLLVDFCGGKTGHRSKHQQGRTEQVVKAAALPKRRAATTAADAALRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVKMFERSPVVAALVQDALDRARVGDDETARTATSRMSLTVADSTEVLAKAVVGSSSSPSASVTSAAVGFSRPDVVYLDPMFPQQRKGKKKKSALVKKGMQMLQALLEEEDRAEGENMQQGTEIGGRIPDGAGGGDVTGEGEAGVVENREEERRLFDIAMNFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 516          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A836C901_9STRA (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C901_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.040e-39
Identity = 118/302 (39.07%), Postives = 147/302 (48.68%), Query Frame = 1
Query:  169 FTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYVAPP 1074
            F + +D  G L L    +   PL VDF  GK G+R+  Q G  E VVKA                    S G      P PL+WDLTAGLG D+F++A AG RV MFERSPVVAAL+QDAL R     +   +  ASRM L VADS       ++G +             RPDV  LDPMFP      KTK ALVKK MQ+LQ+L            QQG+                      A    ++  +LF  A  FA  KVVVKRP+ G +LV   +P+H++  ++ RFDVY A P
Sbjct:   40 FLLAYDAKGHLGLSDVSNSVQPLTVDFLEGKMGYRAAQQAG--ELVVKAVR------------------SSGK-----PPPLVWDLTAGLGRDSFVMAGAGCRVVMFERSPVVAALLQDALVRLAAAPEADAQQVASRMQLHVADS------CSLGDAFQL-------ECERPDVCLLDPMFPP-----KTKKALVKKDMQVLQSLF-----------QQGVAN-------------------SATNTDDDAAKLFATAAAFARSKVVVKRPIKGDTLVPVPKPTHSLRGRSNRFDVYAAGP 268          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A7S3XWK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWK9_HETAK)

HSP 1 Score: 141 bits (355), Expect = 6.400e-36
Identity = 102/301 (33.89%), Postives = 146/301 (48.50%), Query Frame = 1
Query:  160 GFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVY 1062
            G+ +++ F+  G L +    + F+PL VDF  GK G+R    +   EQ+ KA  L   R                        P++WD+TAGLG D+F+LA AG RV M ERSPV+ +++ D L+R    +D+ ++   S +SL++ DST++   + +             +   P VVYLDPMFP      K+K AL KK MQ+LQ LL                  GH  D                E++EEE  LF++A++  +R+VVVKRP  GP L     PS  +  K  RFDVY
Sbjct:   52 GYAYSLQFNNEGALGIHCHTAKFSPLYVDFTSGKLGYRGCRPE--VEQIYKAVQLKDTRT-----------------------PVVWDMTAGLGRDSFILACAGCRVHMLERSPVIGSILLDGLERLGKDEDQQSKEIRSLLSLSIGDSTKMQMASVIN------------TVPEPQVVYLDPMFPA-----KSKKALAKKDMQILQGLL------------------GHGID--------------QAEKEEEEENLFNVALRLCSRRVVVKRPAKGPPLAGR-PPSFVLPGKTNRFDVY 277          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A7V7F1D0_9DELT (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7F1D0_9DELT)

HSP 1 Score: 117 bits (294), Expect = 2.920e-27
Identity = 96/304 (31.58%), Postives = 138/304 (45.39%), Query Frame = 1
Query:  157 DGFKFTMLFDETGRLALGQPGSGF-NPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYV 1065
            D F   ++  E  R+ L Q G G   PL VDF  G   +R KH  G+ + + KAA L                        K   P L D TAGLG DAF+LA  G RV++ ERSP++AAL+QD +DRA+  D   T      M+LTV DST++L                   A +PDV+++DPM+P ++K     SALVKK M++++ ++ ++                                       ++   L + A+  A ++VVVKRP+  P L     PS  +  K  RFDVY+
Sbjct:   43 DDFPLLLMVTEQ-RIELQQIGPGAPGPLFVDFVCGAANYRRKHGGGRKQAIAKAAGLK-----------------------KGLTPTLIDATAGLGRDAFVLAGLGCRVQLIERSPIIAALLQDGIDRAKA-DPGLTSIVTDNMTLTVGDSTKIL---------------HEWQAKKPDVIFIDPMYPHREK-----SALVKKEMRLIRMVVGDD---------------------------------------QDSTTLLETALAVAGQRVVVKRPIQAPCLTGRA-PSFTINCKKNRFDVYL 261          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A1G8DB25_9VIBR (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Vibrio xiamenensis TaxID=861298 RepID=A0A1G8DB25_9VIBR)

HSP 1 Score: 115 bits (289), Expect = 1.460e-26
Identity = 101/277 (36.46%), Postives = 132/277 (47.65%), Query Frame = 1
Query:  235 LVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYV 1065
            + VD  GG   HR K   GK + + KA  L                        K  LP + D TAGLG DAF+LA  G +V+M ER+PVVAAL+ D L+RA+  D E     + RMSL  A S + LA+ A  S+            +RPDVVYLDPM+P  +   K KSALVKK M++ Q+L+    GA+ +  Q                                   L   A+K AT++VVVKRP +   L  H +PS A+ +K  RFDVYV
Sbjct:   55 IYVDLVGGSVAHRRKFGGGKGQAIAKAVGLN-----------------------KGALPNVLDGTAGLGRDAFVLASLGCKVQMVERNPVVAALLDDGLERAKQ-DSEIGLWVSERMSLLHASSHDALASLADDSAF-----------TRPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQSLV----GADLDADQ-----------------------------------LLQPALKLATKRVVVKRPDYANWLDEH-KPSMAIETKKNRFDVYV 254          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: F3KF75_9GAMM (Ribosomal RNA small subunit methyltransferase J n=1 Tax=gamma proteobacterium IMCC2047 TaxID=434085 RepID=F3KF75_9GAMM)

HSP 1 Score: 115 bits (289), Expect = 1.740e-26
Identity = 104/302 (34.44%), Postives = 139/302 (46.03%), Query Frame = 1
Query:  163 FKFTMLFDETGRLALGQPG-SGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAP-LPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVY 1062
            F   +  DE G + L Q G    NP+V+DF GG  G R KH     E V  A                          AKA   P + D TAGLG DAF+LA  G  V M ERSPVVA +++DAL RA++  + +  TA  RM L  AD+ + +                ++S   P+VVYLDPMFP+     ++KSA VKK M++LQ LL    GA+ +  +                                   LF+ A+  ATR+VVVKRP   P  +  ++P H V  K+GRFD+Y
Sbjct:   47 FPLLIWVDENG-IGLRQSGRKAPNPIVIDFVGGALGFRGKHSPHAKELVANAVG------------------------AKAGHTPTVLDATAGLGRDAFILASRGCSVIMLERSPVVALMLEDALRRAQLDPEVSPVTA--RMQLYQADACQFMTA--------------LSSEDYPEVVYLDPMFPE-----RSKSASVKKEMRLLQQLL----GADMDTLE-----------------------------------LFETALTVATRRVVVKRPKLAPC-ISELKPHHVVEGKSGRFDIY 262          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A081KFJ1_9GAMM (Ribosomal RNA small subunit methyltransferase J n=2 Tax=Endozoicomonas TaxID=305899 RepID=A0A081KFJ1_9GAMM)

HSP 1 Score: 114 bits (286), Expect = 3.840e-26
Identity = 97/296 (32.77%), Postives = 134/296 (45.27%), Query Frame = 1
Query:  175 MLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVY 1062
            + FD +G LA+ + GS   P++VDF GGK GHR K   GK + + KA  L                        K   P + D T GLG DAF+LA  G  V M ERSPVVAAL++D L RA   +D      A +MSL   ++ E++                 AS ++ DVVYLDPMFP ++K     SALVKK M++ Q LL ++  A+                                       +L + A++ A  +VVVKRP   P L     P++ +  K  R+D+Y
Sbjct:   43 VAFDASGELAVQRAGSKEKPIIVDFVGGKAGHRRKFGGGKGQDIAKAVGLN-----------------------KGVKPSVLDATGGLGRDAFVLASLGCNVTMIERSPVVAALLEDGLRRAL--EDSDVSPIAEQMSLLKGNAIELMK----------------ASENKYDVVYLDPMFPHREK-----SALVKKEMRLFQDLLGDDPDAD---------------------------------------QLLEPALELAEYRVVVKRPRLAPDLNGQA-PTYRLEGKACRYDIY 252          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: A0A2C9PA42_9VIBR (Ribosomal RNA small subunit methyltransferase J n=15 Tax=Vibrio TaxID=662 RepID=A0A2C9PA42_9VIBR)

HSP 1 Score: 113 bits (283), Expect = 1.030e-25
Identity = 97/277 (35.02%), Postives = 128/277 (46.21%), Query Frame = 1
Query:  235 LVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYV 1065
            + VD  GG   HR K   GK + + KAA L                        K   P + D TAGLG DAF+LA  G +V+M ER PVVAAL+ D L RA+  D+E     + RMSL  A S E L + A  S              RPDVVYLDPM+P  +   K KSALVKK M++ Q+L+  +  A+G                                       L + A+K AT++VVVKRP +  + +   +P+ A+ +K  RFDVYV
Sbjct:   55 IFVDLAGGAVAHRRKFGGGKGQAIAKAAGLN-----------------------KGATPTVLDGTAGLGRDAFVLASLGCKVQMVERHPVVAALLDDGLSRAKQ-DEEIGEWVSERMSLLHASSLEALDSLADDSQF-----------ERPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQSLVGADTDADG---------------------------------------LLEPALKLATKRVVVKRPDYA-NWLDEKKPTMAIETKKNRFDVYV 254          
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Match: U3CGY4_9VIBR (Ribosomal RNA small subunit methyltransferase J n=4 Tax=Vibrio TaxID=662 RepID=U3CGY4_9VIBR)

HSP 1 Score: 113 bits (283), Expect = 1.030e-25
Identity = 96/277 (34.66%), Postives = 128/277 (46.21%), Query Frame = 1
Query:  235 LVVDFCGGKTGHRSKHQQGKSEQVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVADSTEVLATAAVGSSXXXXXXXXVASASRPDVVYLDPMFPQQKKGKKTKSALVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAGAVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGRFDVYV 1065
            + VDF  G   HR K   GK + + KAA L                        K  +P + D TAGLG DAF+LA  G +V+M ER+PVVAAL+ D L RA+  D +       RMSL  A S + L+  A  +              RPDV+YLDPM+P  +   K KSALVKK M++ Q L+  +  A+G                                       L   A+K A+++VVVKRP + P L + V+PS A+ +K  RFDVYV
Sbjct:   55 ICVDFATGAVAHRRKFGGGKGQAIAKAAGLN-----------------------KGAMPTVLDATAGLGRDAFVLASLGCKVQMIERNPVVAALLDDGLTRAQQ-DPDIGEWMIERMSLLHASSLDALSLLAQDNEF-----------QRPDVIYLDPMYPHPEN--KKKSALVKKEMRVFQTLVGADQDADG---------------------------------------LLAPALKLASKRVVVKRPDYAPWLDQ-VKPSMAIETKKNRFDVYV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16727.4818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPX8_ECTSI5.150e-20186.39SAM-dependent methyltransferase n=1 Tax=Ectocarpus... [more]
A0A6H5JS05_9PHAE4.070e-20085.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C901_9STRA1.040e-3939.07Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A7S3XWK9_HETAK6.400e-3633.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7V7F1D0_9DELT2.920e-2731.58Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A1G8DB25_9VIBR1.460e-2636.46Ribosomal RNA small subunit methyltransferase J n=... [more]
F3KF75_9GAMM1.740e-2634.44Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A081KFJ1_9GAMM3.840e-2632.77Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A2C9PA42_9VIBR1.030e-2535.02Ribosomal RNA small subunit methyltransferase J n=... [more]
U3CGY4_9VIBR1.030e-2534.66Ribosomal RNA small subunit methyltransferase J n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16727contigEcto-sp13_S_contig16727:1881..3844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score574.3
Seed ortholog evalue3.9e-161
Seed eggNOG ortholog2880.D7FPX8
Model size1077
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.Putative SAM-dependent methyltransferase
EggNOG OGs2SA1Z@2759,COG0500@1
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-01_008260.1
Cds size1077
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462877.4291704-CDS-Ecto-sp13_S_contig16727:1880..24351681462877.4291704-CDS-Ecto-sp13_S_contig16727:1880..2435Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16727 1881..2435 -
1681462877.440767-CDS-Ecto-sp13_S_contig16727:2772..30541681462877.440767-CDS-Ecto-sp13_S_contig16727:2772..3054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16727 2773..3054 -
1681462877.4565809-CDS-Ecto-sp13_S_contig16727:3604..38441681462877.4565809-CDS-Ecto-sp13_S_contig16727:3604..3844Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16727 3605..3844 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16727.4818.1prot_Ecto-sp13_S_contig16727.4818.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16727 1881..3844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16727.4818.1

>prot_Ecto-sp13_S_contig16727.4818.1 ID=prot_Ecto-sp13_S_contig16727.4818.1|Name=mRNA_Ecto-sp13_S_contig16727.4818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
KEDLERCRSLAKKLGLALVMARQEQGVEEEEEHQGERGKAERLAGGPAQA
GRDGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGHRSKHQQGKSE
QVVKAAALPKRRAATAAADAPLRPPSPGDDDAKAPLPLLWDLTAGLGTDA
FLLAQAGWRVEMFERSPVVAALVQDALDRARVGDDETTRTAASRMSLTVA
DSTEVLATAAVGSSSSSSSSASVASASRPDVVYLDPMFPQQKKGKKTKSA
LVKKGMQMLQALLEEEDGAEGEKRQQGIEPGGHTPDGTGGGDVAGEGEAG
AVERQEEERRLFDIAMKFATRKVVVKRPVHGPSLVRHVQPSHAVVSKNGR
FDVYVAPP*
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mRNA from alignment at Ecto-sp13_S_contig16727:1881..3844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16727.4818.1 ID=mRNA_Ecto-sp13_S_contig16727.4818.1|Name=mRNA_Ecto-sp13_S_contig16727.4818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1964bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16727:1881..3844- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGAAGACCTCGAACGATGTCGGAGTCTGGCGAAGAAGCTGGGGCTGGC GCTAGTAATGGCAAGGCAGGAACAGGGGGTGGAGGAGGAAGAGGAGCATC AAGGGGAGAGGGGGAAGGCGGAAAGGCTGGCTGGAGGTCCTGCCCAAGCG GGACGCGATGGCTTCAAATTTACGATGCTCTTCGATGAGACCGGCCGCTT AGCGCTGGGGCAACCGGGGAGTGGCTTCAACCCACTTGTGGTCAGTCGAT TTACCCGGAGTTGTTACACAAGTACCCCTTTGAACGTCCCCAACTCCCGT ATGCTATTGCCTACAACTCGTGGAAGAGAACACCCAAGTCAATCTGGATA AACGCCACGTTCGCACGACTCAGACTCCAGAGATGAACAAGGCCACGTGC AGCTGCTGTGTCCGCGAATCGCAAGCTTCTGCGTTGCCGGTTTCCTTGGA AAGCTTGCACAGTCCCATAAGCATCACGGCTAGCGTGTTCTGGTTGCTTA AACGCCACGTTCGCACGACTCAGACTCCAGAGATGAACAAGGCCACGTGC AGCTGCTGTGTCCGCGAATCGCAAGCTTCTGCGTTGCCGGTTTCCTTGGA AAGCTTGCACAGTCCCATAAGCATCACGGCTAGCGTGTTCTGGTTGCTGC AGTACCTCCCGTGTTCAAATCTGGCGCTGCAGTGCTCTTGTGCGTGATTC CTACAGCGTAACACCCTATCCATCGTGCCGAAGCGATAGTGACAAACGGT TCGGACGCTCACCATTCAACACCACGGTTGCACGCCCCAGGTGGACTTCT GCGGAGGCAAGACCGGGCACCGCTCGAAGCACCAGCAAGGAAAGAGTGAG CAGGTGGTCAAGGCGGCCGCACTACCTAAGCGTCGCGCCGCCACGGCTGC AGCTGACGCGCCTCTCCGACCTCCCTCTCCGGGTGACGATGATGCGAAAG CCCCGTTGCCGCTGCTGTGGGACCTTACCGCCGGCTTGGGGACTGACGCG TTCCTTCTCGCCCAAGCGGGGTGGCGAGTGGAGATGTTTGAGCGGTCCCC GGTGGTTGCAGCTCTAGTGCAGGTGCGATCTCATGCGCGTATCTTACGAA CCGTGGGATGCTTGTCGTAGACGATTGGCGGTGCTGGTCCGAAGCTGGCG ACGTGGATGGGCCTGGTATCATGCTGCATGGTTTGCATCGCGGCGGCATC GAATGCGGTATTGGTATCCGGCAGGATTTCTGAGCGATGCTCTCTGGGAT CTTGGTCTGGTGGTGGACGTTGTACGCATGGACACCCTGACCTGCGGCGG TAACTGTTGCAGATGGCATCAAGTGGTAACGCGCGATGCCGTTCGTGTTG AGTTATATTGCCGGCACTCATGTTCCTCGATCGCAATTCTCCGTGGTCTA CACGAACAGGACGCTTTGGATCGTGCCCGGGTTGGCGACGACGAGACCAC TCGCACAGCGGCATCTCGCATGAGCCTCACGGTCGCGGATAGCACCGAGG TCCTAGCAACAGCAGCGGTAGGATCATCGTCATCGTCATCATCGTCAGCA TCGGTGGCTAGTGCTTCCCGGCCAGATGTGGTTTACCTCGACCCGATGTT CCCCCAGCAGAAGAAAGGCAAGAAGACGAAATCCGCGCTTGTGAAAAAGG GCATGCAAATGCTGCAGGCATTGCTAGAAGAAGAGGACGGGGCAGAAGGA GAAAAGAGGCAGCAGGGGATAGAGCCAGGAGGTCACACGCCTGACGGCAC CGGGGGTGGTGATGTTGCGGGAGAAGGAGAAGCAGGGGCGGTGGAACGCC AAGAAGAAGAAAGAAGGTTGTTCGATATTGCCATGAAGTTCGCGACGCGG AAGGTGGTGGTCAAACGACCGGTTCACGGTCCGTCTCTCGTGCGGCACGT ACAACCCTCGCACGCCGTCGTGAGCAAGAATGGCCGTTTCGACGTCTACG TTGCTCCTCCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16727:1881..3844-

>mRNA_Ecto-sp13_S_contig16727.4818.1 ID=mRNA_Ecto-sp13_S_contig16727.4818.1|Name=mRNA_Ecto-sp13_S_contig16727.4818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16727:1881..3844- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGAAGACCTCGAACGATGTCGGAGTCTGGCGAAGAAGCTGGGGCTGGC
GCTAGTAATGGCAAGGCAGGAACAGGGGGTGGAGGAGGAAGAGGAGCATC
AAGGGGAGAGGGGGAAGGCGGAAAGGCTGGCTGGAGGTCCTGCCCAAGCG
GGACGCGATGGCTTCAAATTTACGATGCTCTTCGATGAGACCGGCCGCTT
AGCGCTGGGGCAACCGGGGAGTGGCTTCAACCCACTTGTGGTGGACTTCT
GCGGAGGCAAGACCGGGCACCGCTCGAAGCACCAGCAAGGAAAGAGTGAG
CAGGTGGTCAAGGCGGCCGCACTACCTAAGCGTCGCGCCGCCACGGCTGC
AGCTGACGCGCCTCTCCGACCTCCCTCTCCGGGTGACGATGATGCGAAAG
CCCCGTTGCCGCTGCTGTGGGACCTTACCGCCGGCTTGGGGACTGACGCG
TTCCTTCTCGCCCAAGCGGGGTGGCGAGTGGAGATGTTTGAGCGGTCCCC
GGTGGTTGCAGCTCTAGTGCAGGACGCTTTGGATCGTGCCCGGGTTGGCG
ACGACGAGACCACTCGCACAGCGGCATCTCGCATGAGCCTCACGGTCGCG
GATAGCACCGAGGTCCTAGCAACAGCAGCGGTAGGATCATCGTCATCGTC
ATCATCGTCAGCATCGGTGGCTAGTGCTTCCCGGCCAGATGTGGTTTACC
TCGACCCGATGTTCCCCCAGCAGAAGAAAGGCAAGAAGACGAAATCCGCG
CTTGTGAAAAAGGGCATGCAAATGCTGCAGGCATTGCTAGAAGAAGAGGA
CGGGGCAGAAGGAGAAAAGAGGCAGCAGGGGATAGAGCCAGGAGGTCACA
CGCCTGACGGCACCGGGGGTGGTGATGTTGCGGGAGAAGGAGAAGCAGGG
GCGGTGGAACGCCAAGAAGAAGAAAGAAGGTTGTTCGATATTGCCATGAA
GTTCGCGACGCGGAAGGTGGTGGTCAAACGACCGGTTCACGGTCCGTCTC
TCGTGCGGCACGTACAACCCTCGCACGCCGTCGTGAGCAAGAATGGCCGT
TTCGACGTCTACGTTGCTCCTCCGTAG
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