mRNA_Ecto-sp13_S_contig1649.4676.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: D7FYI0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI0_ECTSI) HSP 1 Score: 1026 bits (2653), Expect = 0.000e+0 Identity = 539/620 (86.94%), Postives = 564/620 (90.97%), Query Frame = 1
Query: 91 IDSSMRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPILTNIATGVRARWSTKKKEEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSADDSESTVREEDVWEEGNSMPDAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTNECSKKGKFSCGGSKGSPSIGEENRDGEDERGGTRHGREGEERGIKRGQGVESQPKHASIRQEEGESSLKENNQDSNSFDEASNRRPFTPTPPLFKSSFGNQRSETGRPLGSVANWFGRWLVHAHIGGSKSRRADDSDIDRDGRISRVKPAKVEASTQLEPSPPAGNDMSKAGRESRSAKRLPRRMWAPGLRGWVRAGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG 1950
+ S+MRTAES+SLDTGNVAPAVPSALS+SQAEQRPQAIA+NNSVTT DGQSDPILTNIATGVRARWSTK+ EEAAPRKPSR RLQ+ISKQCLPRGGTYL+T+IGPIQ VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSV+TEIRIRALMQETLLGPK+VDAS+DF ESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSD SHE A RLSADDSES V EEDVWEE N MP+AIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENT+ECSKKG FS GSK SP I EENR GEDERGGTR+GREGE RGI+RGQG ESQPKHA IRQ G+SS K NQDS S DEA +RR FTPT P FK SFGNQRSE GRPLGSVANWFGRWLVHAHIG +KSR ADD IDRDGRISRVK A+VEA+TQLEP P AGN++SKAGRESR+AKR PRR+WAPGL GWVR GIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG
Sbjct: 1 MGSNMRTAESSSLDTGNVAPAVPSALSASQAEQRPQAIAVNNSVTTIDGQSDPILTNIATGVRARWSTKRNEEAAPRKPSRLRLQRISKQCLPRGGTYLSTVIGPIQ-----------VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVDTEIRIRALMQETLLGPKNVDASVDFHESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDPSHENAARLSADDSESMVSEEDVWEEENPMPNAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTDECSKKGNFSSRGSKESPIIREENRQGEDERGGTRNGREGEGRGIERGQGAESQPKHAPIRQV-GDSSSKGKNQDSTSSDEAPDRRHFTPTRPSFKPSFGNQRSEVGRPLGSVANWFGRWLVHAHIGENKSRSADDGSIDRDGRISRVKSAEVEANTQLEPPPAAGNNVSKAGRESRNAKRTPRRIWAPGLNGWVRTGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNG 608
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A6H5KVN3_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVN3_9PHAE) HSP 1 Score: 995 bits (2572), Expect = 0.000e+0 Identity = 530/621 (85.35%), Postives = 555/621 (89.37%), Query Frame = 1
Query: 91 IDSSMRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPILTNIATGVRARWSTKKKEEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSADDSESTVREEDVWEEGNSMPDAIDVRTAGDTNDTLRPTSLRHESIAKHMSVHLTEGDSEDENTNECSKKGKFSCGGSKGSPSIGEENRDGEDERGGTRHGREGEERGIKRGQGVESQPKHASIRQEEGESSLKENNQDSNSFDEASNRRPFTPTPPLFKSSFGNQRSETGRPLGSVANWFGRWLVHAHIGGSKSRRADDSDIDRDGRISRVKPAKVEASTQLEPSPPAGNDMSKAGRESRSAKRLPRRMWAPGLRGWVRAGIPSLNGFLPVRTGEVSMTCPLPTKLPSQPEQTEDEFIAPTFGTTVLGNSHGFDPNGR 1953
+ SSMRT ES+SL TGNVAPAVPSALSSSQAEQRPQAIAINNSVTT DGQS+PILTNIATGVRARWST++KE AAP KPS PRL+KISKQCLPRGGTYLAT+IGPIQ VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETE+RIRALMQETLLGP+DVDASIDFD+SVPVENRPDIGKELSYFR FNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSN DGGQYIFTEHQKGGSD SHE A RLSA DSEST REEDVWEE NSMP+AIDVR AGDTNDTLR TSLRHESIAKHMSV LTEG SE+E+++ C KKGK S GSKGSPSI EENR+GEDERGGTR+GREGE RGI RGQG ESQPK+ASIR+ SS K N+ S SFDEA +R PFTPT PL KSSFGNQRSE GRPLGSVANWFGRWLVHAHIGGSKSR ADD DIDRDGRISRVK AKVEASTQ E +PPAGNDMSKAGRESRSA R RRMWAPGL GWVRAGIP LNGFLP+RT EVS+TCPLPT LPSQP+Q EDEFIAPTFGTTVLGNSHGFDPNGR
Sbjct: 1 MGSSMRTVESSSLGTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTIDGQSNPILTNIATGVRARWSTERKEAAAPGKPSIPRLRKISKQCLPRGGTYLATVIGPIQ-----------VGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEVRIRALMQETLLGPEDVDASIDFDDSVPVENRPDIGKELSYFRTFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNTDGGQYIFTEHQKGGSDPSHENAPRLSAGDSESTDREEDVWEEENSMPNAIDVRAAGDTNDTLRHTSLRHESIAKHMSVQLTEGGSEEESSDTCLKKGKKSSRGSKGSPSIREENREGEDERGGTRNGREGEGRGIGRGQGAESQPKYASIRRV-CVSSPKGKNKGSTSFDEAPDRHPFTPTRPLIKSSFGNQRSEMGRPLGSVANWFGRWLVHAHIGGSKSRSADDGDIDRDGRISRVKSAKVEASTQFESTPPAGNDMSKAGRESRSAIRTRRRMWAPGLSGWVRAGIPCLNGFLPMRTEEVSITCPLPTTLPSQPKQREDEFIAPTFGTTVLGNSHGFDPNGR 609
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A836CNA7_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA7_9STRA) HSP 1 Score: 197 bits (500), Expect = 8.780e-50 Identity = 99/199 (49.75%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 349 ISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTE 945
I LPRGG Y+ T GP+Q +GIPPETIKDSMALGL +PQYFV+PP+ F R LG+ LG+NVAEFEFPAYYNFFL+ T+KL+V S+ETE R+R ++QETL GP +D +DF ++VP RP++ E YFR F+GK L++D L+ F+H ++ G+V ++G GA I + A+GG+++ E
Sbjct: 51 IKVTALPRGGIYVPTAAGPLQ-----------IGIPPETIKDSMALGLAMPQYFVMPPDSFHRELGSGLGINVAEFEFPAYYNFFLRKRTIKLVVGSLETERRLRIVLQETLFGPVHIDPDVDFSQAVPRAARPNLAAESDYFRMFDGKVLTLDSLVQFVHFDAAGVVTIEGEGDYRGAR--IELRHRRANGGEFVVDE 236
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: W4GLH8_9STRA (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLH8_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.750e-43 Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGG 960
LPRGG ++T IGP+Q GIPPETIKDSM LGLPVP YFVVP E F +TLG+++GVNVAEFEFPAY NFF K +V LIV S + E RIR + QETL GP+ +D DF S P + PD+ EL YFR F +S+D+L+ F H N+ + + D ++I N G+++FT+H G
Sbjct: 17 LPRGGCIVSTSIGPVQ-----------YGIPPETIKDSMVLGLPVPMYFVVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQSVNLIVASQDAEDRIRRVFQETLFGPQQIDIEHDFPVSAPPSSYPDLPAELGYFRKFGNTLISLDMLLKFTHFNAQNVATITAGDNK------VTIQKLN---GEFVFTDHTTNG 195
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A1V9ZS88_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS88_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.500e-43 Identity = 90/165 (54.55%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVIL 858
LPRGGT ++T IGPIQ GIPPETIKDSMALGLPVP YF+VP E F +TLG+++GVNVAEFEFPAY NFF K V LIV S E E RIR + QETL GP +D +DF VP E P++ EL YFR F +++++L+ F H N +G+ L
Sbjct: 16 LPRGGTIVSTSIGPIQ-----------YGIPPETIKDSMALGLPVPMYFIVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQCVNLIVASQEVEDRIRRVFQETLFGPATIDTKMDFPHQVPAELHPNLPAELGYFRKFGNTLITLEMLLKFTHFNDNGVATL 169
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A024UV41_9STRA (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV41_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.950e-42 Identity = 99/212 (46.70%), Postives = 128/212 (60.38%), Query Frame = 1
Query: 364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFTEHQKGGSDSSHEKAVRLSA 999
LPRGG ++T IGP+Q GIPPETIKDSMA+GLPVP YFVVP E F +TLG+++GVNVAEFEFPAY NFF K +V LIV S E E RIR + QETL GP+ +D DF + P PD+ EL YFR F +++D+L+ F H N+ + L D ++I N G+++ T+H G+ + E VRL A
Sbjct: 16 LPRGGCIVSTSIGPVQ-----------YGIPPETIKDSMAMGLPVPMYFVVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQSVNLIVASQEVEDRIRRVFQETLFGPQQIDIQHDFPATAPTSTYPDLPAELGYFRKFGNTLITLDMLLKFTHFNAQNVATLTA------GDHKVTIQKLN---GEFVVTDHTTNGT-ACIEDFVRLPA 206
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A1W0ABB6_9STRA (cGMP-dependent 3',5'-cGMP phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABB6_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.680e-41 Identity = 87/172 (50.58%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 343 QKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVIL 858
+K+ LPRGGT ++T IGP+Q GIPPETIKDSMALGLPVP YF+VP E F +TLG+++GVNVAEFEFPAY NFF K V LIV S E E RIR + QETL GP+ +D DF + P P++ EL YFR F +++++L+ F H N + + L
Sbjct: 4 EKLKVTDLPRGGTIVSTSIGPVQ-----------YGIPPETIKDSMALGLPVPMYFIVPSEPFTKTLGSNMGVNVAEFEFPAYCNFFFKRQCVNLIVASQEVEDRIRRVFQETLFGPQTIDVKQDFPHNAPASTYPNLEAELGYFRKFGNTLITLEMLLKFTHFNDENVATL 164
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A5D6XUJ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUJ1_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.080e-40 Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 304 EEAAPRKPSRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDG 846
++AAP++P+ L+ I LPRGG +T IGP+Q +G+PPETIKDSM LGLPVP++++VP E F +TLG ++GVNVAEFEFPAY NFF K V LIV S++ E+RIR + QETL GP +D DF +S P E PD+ KEL+YFR F +++D+L+ F H + G
Sbjct: 42 DDAAPQEPTI--LESIK---LPRGGVVASTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKTLGANMGVNVAEFEFPAYCNFFFKRQCVNLIVTSIDVELRIRQVFQETLFGPAALDLKADFPQSTPPELYPDLHKELAYFRKFGDTLITLDMLLKFTHFDEHG 206
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: A0A662XL74_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XL74_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.090e-40 Identity = 93/205 (45.37%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 328 SRPRLQKISKQCLPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDGIVILDGVDGTPGADWCISIAVSNADGGQYIFT 942
+RP L+ I LPRGG T IGP+Q +G+PPETIKDSM LGLPVP++++VP E F +TLG ++GVNVAEFEFPAY NFF K V LIV S + E RIR + QETL GP+++D DF ++ P E PD+ +EL YFR F +++D+L+TF H + +G ++ D G+ + + DG +FT
Sbjct: 480 ARPTLETIK---LPRGGVVACTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKTLGANMGVNVAEFEFPAYCNFFFKRQCVNLIVSSQDVEKRIRQVFQETLFGPEELDLRRDFPQATPSEQIPDLKRELEYFRKFGDTLITLDMLLTFTHFDVNGEALIRQPDAAAGSS---PVLIRKGDG---VFT 664
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Match: H3GP72_PHYRM (Cyclic nucleotide-binding domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GP72_PHYRM) HSP 1 Score: 167 bits (424), Expect = 5.300e-40 Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 364 LPRGGTYLATIIGPIQASFSSESTGFFVGIPPETIKDSMALGLPVPQYFVVPPEKFCRTLGNSLGVNVAEFEFPAYYNFFLKGNTVKLIVDSVETEIRIRALMQETLLGPKDVDASIDFDESVPVENRPDIGKELSYFRAFNGKELSIDLLITFIHQNSDG 846
LPRGG T IGP+Q +G+PPETIKDSM LGLPVP++++VP E F + LG +LGVNVAEFEFPAY NFF K V LIV S + E RIR + QETL GP ++D DF +S P E PD+ KEL YFR F +++D+L+TF H +++G
Sbjct: 22 LPRGGVVACTSIGPVQ-----------LGMPPETIKDSMKLGLPVPRHYIVPSEPFTKNLGANLGVNVAEFEFPAYCNFFFKRQCVNLIVTSADVETRIRQVFQETLFGPAELDLRNDFPQSTPPEQFPDLRKELEYFRKFGDTLITLDMLLTFTHFDANG 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1649.4676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1649.4676.1 >prot_Ecto-sp13_S_contig1649.4676.1 ID=prot_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=617bp MRTAESNSLDTGNVAPAVPSALSSSQAEQRPQAIAINNSVTTFDGQSDPIback to top mRNA from alignment at Ecto-sp13_S_contig1649:2133..6047+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1649.4676.1 ID=mRNA_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1649:2133..6047+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1649:2133..6047+ >mRNA_Ecto-sp13_S_contig1649.4676.1 ID=mRNA_Ecto-sp13_S_contig1649.4676.1|Name=mRNA_Ecto-sp13_S_contig1649.4676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1851bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1649:2133..6047+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |