mRNA_Ecto-sp13_S_contig16464.4660.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: D8LQR8_ECTSI (NapH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR8_ECTSI) HSP 1 Score: 304 bits (778), Expect = 2.480e-104 Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 1
Query: 7 RHLLGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELM 456
RHLLGDE+VEAYAGPDQGVQNV AS+WEPFIRTMPHSEYPSASACLCEGFARQVENFLGND IEPALQFPPGPPPAG+NAS EFASWSEISQVCGDSRVW GMHFAGAVPAGAELCGGEDMAKSIHDSFERLK GDESAAVFKSDVGELM
Sbjct: 3 RHLLGDELVEAYAGPDQGVQNVKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDKIEPALQFPPGPPPAGLNASLEFASWSEISQVCGDSRVWSGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKAGDESAAVFKSDVGELM 152
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: D8LSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP1_ECTSI) HSP 1 Score: 303 bits (776), Expect = 1.530e-100 Identity = 140/154 (90.91%), Postives = 148/154 (96.10%), Query Frame = 1
Query: 7 RHLLGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMVRPR 468
RHLLGDE+VEAYAGPDQGVQ + AS+WEPFIRTMPHSEYPSASACLCEGFARQVENFLG+D IEPAL+FPPGPPPAG+NAS EFASWSEISQVCGDSR+WGGMHFAGAV AGAELCGGEDMAKSIHDSFERLK GDESAA+FKSDVGELMVRPR
Sbjct: 249 RHLLGDELVEAYAGPDQGVQTMKASEWEPFIRTMPHSEYPSASACLCEGFARQVENFLGDDKIEPALEFPPGPPPAGLNASLEFASWSEISQVCGDSRIWGGMHFAGAVLAGAELCGGEDMAKSIHDSFERLKAGDESAAIFKSDVGELMVRPR 402
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A6H5K7C3_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C3_9PHAE) HSP 1 Score: 276 bits (707), Expect = 8.150e-90 Identity = 126/155 (81.29%), Postives = 138/155 (89.03%), Query Frame = 1
Query: 7 RHLLGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASP-EFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMVRPR 468
+H LGD +VEAYAGP QGVQ + AS+WEPFIRTMPHSEYPS S+CLCE FA+Q+ENFLG+DTIEPALQFPPGPPP G +A P EFASWSEISQVCGDSR WGGMHFAGAVPAGAELCG DMAKSIHDS ERLK GDESAA+F +D+GELMVRPR
Sbjct: 270 KHKLGDALVEAYAGPGQGVQTIKASEWEPFIRTMPHSEYPSGSSCLCEAFAKQIENFLGDDTIEPALQFPPGPPPPGFDAPPLEFASWSEISQVCGDSRAWGGMHFAGAVPAGAELCGSTDMAKSIHDSLERLKVGDESAAIFTTDIGELMVRPR 424
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE) HSP 1 Score: 209 bits (533), Expect = 5.250e-63 Identity = 96/155 (61.94%), Postives = 120/155 (77.42%), Query Frame = 1
Query: 1 ICRHLLGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMVRP 465
+ R+ LGDE+V+AYAGPD G+Q + AS+WEP+IRTMPHSEYPS S+C+CEGFA + + GND I+P + FPP P EF+SW+EISQ+CGDSRVW G+HF AVPAGAELCGG+++A SI S + L GDESAAVFK DVGEL++RP
Sbjct: 332 VIRNELGDELVDAYAGPDIGIQTIKASEWEPYIRTMPHSEYPSGSSCICEGFASALRLWAGNDIIDPPIGFPP---PEFGGPILEFSSWTEISQMCGDSRVWAGLHFEEAVPAGAELCGGDEIAVSIAASIDALTAGDESAAVFKRDVGELVLRP 483
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.400e-39 Identity = 81/163 (49.69%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 1 ICRHLLGDEMVEAYAGPDQGVQNVNASQW-EPFIRTMPHSEYPSASACLCEGFARQVEN-------FLGNDTIEPALQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMVRP 465
+ R+ +GDE+VEAYAGPD GVQN+ AS+W + +R ++ E F Q E + G DTI P L+ P P FASWSEIS++CGDSRVWGG+HF +VPAG ELCGG++MA SI S + L GDES AVFK D+GELM+RP
Sbjct: 381 VVRNEIGDEIVEAYAGPDSGVQNMTASEWVDRSVRIFQGTDTERKQ----ERFHMQQEYHKKTGRVWAGTDTINPPLEQPEEDPLVS------FASWSEISEMCGDSRVWGGLHFEESVPAGVELCGGDEMAISIAASIDGLTAGDESVAVFKRDIGELMLRP 533
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: D8LLS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS4_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.590e-36 Identity = 77/154 (50.00%), Postives = 85/154 (55.19%), Query Frame = 1
Query: 7 RHLLGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMVRPR 468
+H LGDE+VEAYAGP +GVQ + AS+WE F+RT P SEYPSASACLCEG AVPAGAELCGG DMA SIHDS ERLK GDESAA+FK+DVGELMVRPR
Sbjct: 393 KHKLGDELVEAYAGPGEGVQTMKASEWESFMRTNPTSEYPSASACLCEG----------------------------------------------------------AVPAGAELCGGMDMAMSIHDSLERLKAGDESAAIFKTDVGELMVRPR 488
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: R7QSC8_CHOCR (PAP2/haloperoxidase-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC8_CHOCR) HSP 1 Score: 108 bits (270), Expect = 1.210e-24 Identity = 58/146 (39.73%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 16 LGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTI----EPA----------LQFPPGPPPAGMNASPEFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCG 411
L + + AYAG +QG + + A WEP+IRTMPHSEYPS SAC C FA ++ F G+D +P+ PG P A + + SWS +++ CG SR+ GGMHF +VPAGA LC + + D + L G
Sbjct: 363 LAGQKIFAYAGANQGKKQMRAEDWEPYIRTMPHSEYPSGSACFCAVFAESMKLFFGSDNFLANGKPSPLSLKVAAGQSLVEPGRPSADVTLV--YNSWSAVAEDCGKSRLTGGMHFTASVPAGAALCA--PFGRRMFDVIKALSSG 504
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A7S3Z7G8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7G8_9EUKA) HSP 1 Score: 106 bits (265), Expect = 6.580e-24 Identity = 62/167 (37.13%), Postives = 88/167 (52.69%), Query Frame = 1
Query: 16 LGDEMVEAYAGPD---------QGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGPPPAGMNASPE----------FASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVFKSDVGELMV 459
+G YAGP G + + +++EP IRTMPHSEYPSASAC+C+ F + + LG+D+I P G G SP F WSE++ +CG SR++GGMHF AVPAGA LC +++ KS +F +L+ G + + D + V
Sbjct: 363 IGRGTAFTYAGPYGSNFGGPFVDGPEVIKQTEFEPVIRTMPHSEYPSASACVCQAFFDALADKLGSDSITPPATL--GIQAGGTRNSPGLRPVEDVNLIFNLWSEMNTLCGQSRLFGGMHFTKAVPAGANLC--KNIGKSASTAFAQLESGALTEGLLDLDETHIRV 525
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A7S1ZRM1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRM1_TRICV) HSP 1 Score: 105 bits (262), Expect = 1.520e-23 Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 16 LGDEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFL----GNDTIEPALQFPPGPPPAGMNASP------EFASWSEISQVCGDSRVWGGMHFAGAVPAGAELCGGEDMAKSIHDSFERLKCGDESAAVF 432
+GD+ + +Y GP G +++A W P+IRTMPH+EYPS SACLC A V+ ++ GN+T +F G P FA+ +E+ +CG SR+WGGMHF +V +LC G AK+ +D +L ++ ++F
Sbjct: 372 MGDKTINSYRGPFMGTGDMSARDWHPYIRTMPHAEYPSGSACLCTAVAEYVDAYMADQHGNNTYPTIWEFAAGSSETEPGVVPAKALTLSFATMTELRDMCGKSRLWGGMHFTKSVQDSYQLCKGLG-AKAYNDWARQLLPNNDLDSLF 519
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Match: A0A8J5X3W0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3W0_DIALT) HSP 1 Score: 103 bits (257), Expect = 7.730e-23 Identity = 54/127 (42.52%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 22 DEMVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFLGNDTIEPALQFPPGP---PPAGMNASPE------------FASWSEISQVCGDSRVWGGMHFAGAVPAGAELCG 357
DE V +Y GP + ++ S WE +IR MPH+EYPS S+CLC F + F G P GP P A ++S E FASW E+ VCG+SR+ GGMHF AVP G LCG
Sbjct: 372 DETVMSYRGPSEEPGDIKGSDWEAYIRIMPHAEYPSGSSCLCRAFVEALVTFEGITAAAPVPPMGAGPLVQPFAAGSSSVEPGKTPDTDIVLTFASWDEVVHVCGESRLDGGMHFTAAVPDGERLCG 498 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16464.4660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig16464.4660.1 >prot_Ecto-sp13_S_contig16464.4660.1 ID=prot_Ecto-sp13_S_contig16464.4660.1|Name=mRNA_Ecto-sp13_S_contig16464.4660.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MVEAYAGPDQGVQNVNASQWEPFIRTMPHSEYPSASACLCEGFARQVENFback to top mRNA from alignment at Ecto-sp13_S_contig16464:2043..3254+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig16464.4660.1 ID=mRNA_Ecto-sp13_S_contig16464.4660.1|Name=mRNA_Ecto-sp13_S_contig16464.4660.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16464:2043..3254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16464:2043..3254+ >mRNA_Ecto-sp13_S_contig16464.4660.1 ID=mRNA_Ecto-sp13_S_contig16464.4660.1|Name=mRNA_Ecto-sp13_S_contig16464.4660.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16464:2043..3254+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |