mRNA_Ecto-sp13_S_contig1635.4593.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Match: A0A6H5K0S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0S9_9PHAE) HSP 1 Score: 1658 bits (4293), Expect = 0.000e+0 Identity = 1321/1704 (77.52%), Postives = 1340/1704 (78.64%), Query Frame = 1
Query: 1531 SDFAWSKVGAFPFGQGDMPPTPSKPMSPLVQPRTASSFPVGNPGGGG---------MGFRAIADGEGGAGGGSAAVGTAGATSLSGGGSIADIGGDLGDGNAPV--------SPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVWHRGSTALMREDTISPPACSSSPQPAAAATASGEATGRSGDGDCGGPSTARPSTSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FSSVEAASKDVGDSLSGRGGSERARPGNQKWREIRDKALAANGGSFTTARRLANSGASPKPKLEFKRSALPTLGQL--RRNSVSPTPSSLAGGVRKGGIIRKSKSDCSGDXXXXXXXXXXXXXXXIRSIGTPEEEEERMQAKRREVAEKKAIAARXXXXXXXXXXXXXXXXXXXXXXXXXAEELAAAVARGKAAQSPGTDTXXXXXXALPTTVVQAAAPPVGNEQHHPDGGAVEVAXXXXXXDAEADA--SGVSPVAERKATDGVKDDGLVAATVCASXXXXXXXXXXXXXXXXXXXXTVVQGVEQPPAATTPGPVPVAVSGAESVESARVAQQQAEPAPALLATT-EEGEAPTAATAEGGVTPTSTDLLTLTEGTPPGTAAVAVPATVVAATPAVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKRAVSTSPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAGTGAGGETSPVKSSGLSRIKSEGGLTNIVEAKPGFAVKQRGLVAGRPSRERSGFVAADTVKRGLGPAGAFAGNSNWRVEASREKEKSAADVKGDGHGGFHNPMAALRAQXXXXXXXXXXXXARRVRTGSEDWQTPLATSAGVDEAGGGISRMSSPSSESTSATSPRASGMEAAGTPADPAPAPLAMPAWMLSKGISGAGGGALRSPPGGRLLRSRVSPARGSPAGGRHGFGSGGDMLSHGSVGRPLLSSSSATSSPDRPAPXXXXXXXXXXXXAPPTEPGKDEADASARDTNADAADSSTTENTAGDGARGDDVAGSGPGSESVEVGGGVAVEGGAAPAAESXXXXXXAVVV---ASQAGGEKSGDAEGTGDSTGLEMDSAATRGGEAEESSADAAATEPANGGLQALGRFLFGARTESSRTVADDAGDAAPAASATAATGVVIAEGEGKPSESARAAPTPAGADAVSLRDCGEPTKAEVVGDQALELAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECADEADDGGTDAGVGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGAAMAVAPTDPAAAGTTVDGDDVSAEEGGDVPTPALPAVXXXXXXXXXXXXXXXXXXXXXXQGSAAQQADSTAADFTKSFPDGDVVTPEPVTAVVATGEEPTTTAPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSLLTRGRKSSRGSGSGRDGETGSNSGSKSGGLGAGGSSYSRSGSKGLLAMGASLLSGERKTGLAALGSKGTPAKTARRALLQETKQKRTSESKPRQGIFETLRQRSSGNMAESTSSXXXXXXXXXXXXXXXXXXXSLTRGQSPTVPATSTRQGAPSTRAPGGGRDKSTATXXXXXXXXXXXXXXXXXXVPSQGRNEEGANAAXXXXXXXTDGLLDGXXXXXXXXXXXXXXXXXEEPDFWSKYGVIDQDALDEDAEIEI 6561
SDFAWSKVGAFPFGQGDMPPTPSKPMSPLVQPRTASSFPVGNPGG +GFRA ADG+GGA GGS A +SLS GSIADIGGDLGDGNAPV SPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVWHRGSTALMREDTISPPA SSSPQP G PSTARPST XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F SVEAASKDVGDSLSGRGGSERARPGNQKWREIRDKALAANGGSFTTARRLANSGASPKP LEFKR L QL RRNS SPTPSSLAGG+RKGGIIRKSKSDCSGD XXXXXXXXXXX IRSIGTP RMQAK EVAE AIAAR X XXXXXXXX AEELAAAVARGKAAQSPGTDT XXXX HHP GGAVEVA XXXXX SGVSPVAER+ATDGVKDDGLVAATV ASXXXXXXXXXXXXXXXXXXXX TTPGPVP+AVSGAES ESA VAQQQA+PAPALLATT E AVAVPATVVAATPAVTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EKRAVS+SPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAGTGAGGETSPVKSSGLSRI+SEGGL NIVEAK GFAVKQRGLVAGRPSRERSGFVA DTVK+GLGPAGAFAGNSNWRVEASREKEKSA DVKGDGHGGFHNPMAALRAQ XXXXXXX ARRVRTGSEDWQTP ATSAGVDEA G ISRMSSPSSESTS TSPRASGMEA GTPADPAPAPLAMPAWMLSKGISGAGG ALRSPPGGRLLRSRVSPARGSPAGGRHGFGSGGD+LSHG+VGRPLLSSSSATSSPDRPAP PTEP KDEADASARDT A ENTAGD AR DDVAGSGPGSESVEVGGGVAVEGG XXXXXX A QAGGEKS DAEGTGDSTGLEMDSAAT GGEAE+SSADAAATEPA GGLQALGRFLFGARTES RTVADDAGDAAPAA+A GVV A+GEGKPSESARAAP PA ADAV LR CGEP KAEVVGDQALELAAAV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EC D+ADDGGTDAGVG A XXXXXXXXXXXXXXXX GTTVDGDDVSAEE GDVPTP LPAV QG AAQQADSTAAD TK FPDGDVV PEPVTAV+ATGEEPTTTAPNT XXXXXXXXXXXXX SSLL RGRKSSRGSGSGRDGETGSN+GSKSGGLGAGGSSYSRSGSKG LAMGASLLSGERKTGLAALGSKGTPAKTARRALL ET QKRTSESKPRQGIFETLRQRSSGNMAESTSS XXX SL RGQSPTVPATSTRQGAPSTRAPGGGRDKS XXXXXXXXXXXXXXXXX VPSQGR+EEGANAA XXXXXTDGLLDGXXXXXXXXXXXXXXXX EEPDFWSKYGVIDQDALDEDAEIEI
Sbjct: 17 SDFAWSKVGAFPFGQGDMPPTPSKPMSPLVQPRTASSFPVGNPGGXXXXXXXXXXXVGFRATADGKGGARGGSTAAXXXXXSSLSSVGSIADIGGDLGDGNAPVCTSIALRVSPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVWHRGSTALMREDTISPPAHSSSPQPXXXXXXXXXXXXXXXXXXGGVPSTARPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFSVEAASKDVGDSLSGRGGSERARPGNQKWREIRDKALAANGGSFTTARRLANSGASPKPNLEFKRRYDLRLQQLTLRRNSASPTPSSLAGGIRKGGIIRKSKSDCSGDEGXXXXXXXXXXX--IRSIGTPXXXXXRMQAKXXEVAEXXAIAARAVXARDLATQRAAEXXXXXXXXVTNAEELAAAVARGKAAQSPGTDTPAXXXXXXXXXXXXXXXXXXXXXXHHPAGGAVEVAPXXXXXXXXXXXXXSGVSPVAEREATDGVKDDGLVAATVSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPGPVPMAVSGAESAESAGVAQQQAQPAPALLATTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVPATVVAATPAVTPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRAVSSSPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAGTGAGGETSPVKSSGLSRIQSEGGLLNIVEAKSGFAVKQRGLVAGRPSRERSGFVAPDTVKKGLGPAGAFAGNSNWRVEASREKEKSAFDVKGDGHGGFHNPMAALRAQQQQXXXXXXX--ARRVRTGSEDWQTPPATSAGVDEAVGRISRMSSPSSESTSTTSPRASGMEADGTPADPAPAPLAMPAWMLSKGISGAGGRALRSPPGGRLLRSRVSPARGSPAGGRHGFGSGGDLLSHGTVGRPLLSSSSATSSPDRPAPALVAAAAATAASVLPTEPAKDEADASARDTAAXXX-XXXIENTAGDCARDDDVAGSGPGSESVEVGGGVAVEGGXXXXXXXXXXXXXXXXXXXXAPQAGGEKSRDAEGTGDSTGLEMDSAATTGGEAEDSSADAAATEPATGGLQALGRFLFGARTESGRTVADDAGDAAPAAAAATVNGVVAADGEGKPSESARAAPAPAAADAVGLRYCGEPAKAEVVGDQALELAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---ECPDQADDGGTDAGVGPAADDAMEEVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTVDGDDVSAEERGDVPTPTLPAVETPVVDASEGPPQQQDEERVEEQGPAAQQADSTAADITKGFPDGDVVMPEPVTAVIATGEEPTTTAPNTQEAGTSGGRGSSKPSALPSXXXXXXXXXXXXX------SSLLIRGRKSSRGSGSGRDGETGSNNGSKSGGLGAGGSSYSRSGSKGFLAMGASLLSGERKTGLAALGSKGTPAKTARRALLHETMQKRTSESKPRQGIFETLRQRSSGNMAESTSSGRLGNSSXXXNGRTGSGSSSLKRGQSPTVPATSTRQGAPSTRAPGGGRDKSXXXXXXXXXXXXXXXXXXXXVVPSQGRSEEGANAAGDXXXXXTDGLLDGXXXXXXXXXXXXXXXXDEEPDFWSKYGVIDQDALDEDAEIEI 1706
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Match: D7FXK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK9_ECTSI) HSP 1 Score: 1480 bits (3831), Expect = 0.000e+0 Identity = 1177/1564 (75.26%), Postives = 1196/1564 (76.47%), Query Frame = 1
Query: 4 DGLQRILHIRRTAQESVAADTAAHAAKVNDSVPGESGGDFRANLFAARTEAAAAAAAGGPVPAAVRTEPRLLAATWSHINPDRSKQPRGGPKTPEERLKAIEDAKAALRSRVALRKASQSEQASLQEFVNQQGTTSRRPVSLGRSELGSSSPISSSFGGSASAIGSRSSRGGDLDISVGASGGXXXXXXQSPTCAVRHPAYGEQP---LQQQXXXXXXXXVKPSXXXXXXXXXXXXXEGTAPVSSGGAEAADQGLGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMTLSGGGAVALASPGKDRGFSDGEAPGGLLMTGRRGRVHLSGSYTEAAXXXXXXXXXXXXXXXXXXXXXXX-MSPTNKSAFGTPPRVTRSGSASEGRSLHSPPPGPLLVHPQRRQAARQNRSGLRINTSSXXXXXXXXXXXXXXXXXXXXXXAFDRSQLPRSPTVESRKLSKEAAESRTGGGWVQVELPPGAVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFAWSKVGAFPFGQGDMPPTPSKPMSPLVQPRTASSFPVGN-------PGGGGMGFRAIADGEGGAGGGSAAVGTAGATSLSGGGSIADIGGDLGDGNAPVSPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVWHRGSTALMREDTISPPACSSSPQPAAAATASGEATGRSGDGDCGGPSTARPSTSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSVEAASKDVGDSLSGRGGSERARPGNQKWREIRDKALAANGGSFTTARRLANSGASPKPKLEFKRSALPTLGQLRRNSVSPTPSSLAGGVRKGGIIRKSKSDCSGDXXXXXXXXXXXXXXXIRSIGTPEEEEERMQAKRREVAEKKAIAARXXXXXXXXXXXXXXXXXXXXXXXXXAEELAAAVARGKAAQSPGTDTXXXXXXALPTTVVQAAAPPVGNEQHHPDGGAVEV-----AXXXXXXDAEADASGVSPVAERKATDGVKDDGLVAATVCASXXXXXXXXXXXXXXXXXXXXTVVQGVEQPPAATTPGPVPVAVSGAES-VESARVAQQQAEPAPALLATTEEGEAPTAATAEGGVTPTSTDLLTLTEGTPPGTAAVAVPATVVAATPAVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKRAVSTSPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAGTGAGGETSPVKSSGLSRIKSEGGLTNIVEAKPGFAVKQRGLVAGRPSRERSGFVAADTVKRGLGPAGAFAGNSNWRVEASREKEKSAADVKGDGHGGFHNPMAALRAQXXXXXXXXXXXXARRVRTGSEDWQTPLATSAGVDEAGGGISRMSSPSSESTSATSPRASGMEAAGTPADPAPAPLAMPAWMLSKGISGAGGGALRSPPGGRLLRSRVSPARGSPAGGRHGFGSGGDMLSHGSVGRPLLSSSSATSSPDRPAPXXXXXXXXXXXXAPPTEPGKDEADASARDTNADAADSSTTENTAGDGARGDDVAGSGPGSESVEVGGGVAVEGGAAPAAE 4644
DGLQRILHIR+TAQESVAAD AA AAK NDSVPGE+GGDFRA L AAR EAAAAA VRTEPRLLAATWSHIN DRS+QPR GPKTPEERLKAIEDAKAALRSRVALRKASQSEQ EFVNQQGTTSRRPVSLGRSELGSSSPISSSFGGSASAIGSRSSRGG GG Q+PT AV HP YGEQP XXXXXXXX XXXXXXXXXXXXX P SSGGAEAADQGLGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DGEAPGGLLMTGRRG+VHLSGSYTEAAXXXXXXXXXXXXXXXXXXXXXXX +SPTNKSAFGTPPRV RSGSASEGR LHSPPPGPLLVHPQ XXXXXXXXXXXXXXXXSDFAWSKVGAFPFGQG PRTASSFPVGN +GFRA ADGEG A G AGA+SLSG GSIADIGGDLGDGNAPVSPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVW RGSTALMREDTISPPA S S G PSTARPSTSAPXXXXXXXXXXXXXXXXXXXXXXXXXX FSSVEAASKDVGDSLSG+GGSERARPGNQKWREIRDKALAANGGSFTTARRLANS ASPKPKLEFKRSALPTLGQLRRNSVSPTPS LAGGVRKG IIRKSKSDCSGD XXXXXXXXX IRSIGTPEEEEERMQAKRREVAEKKAIAAR X AEELAAAVARGKAAQSPGTDT A PT VVQAAAPPVGNEQHHP+GGAVEV A XXXXX SG+ PVAER+ATDG+KDDGLVAATV ASXXXXXXXXXXXXXXXXXXXX TTPGPVP+AVSGAES ES VAQQQAEPAPALL T EGEA TAA EGGV PTST +LT T GTP AVAVPATVVAATPAVT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKRAVSTSPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAG G G ETSPVKS GLSRI+SEGGLTNIVEAK FAVKQRGLVAGRPSRERSGFVAADTVK+GLGPAGAFAGNSNWRVEASREKEKSAADVKGDGHGGFHNPMAALRAQ XXXXXXXX ARRVRTGSEDWQTP ATSAGVDEAGGGISR+SSPSSE TS TSPRASGMEAAGTPADPAPAPLAMPAWMLSKGISGAGG ALRSPPGGRLLRSRVSPARGSPAG RHGFGSGGD+LS GSVGRPLLSSSS TSSPDRPAP XXXXXXXXXA PTEPGKDE DASARDT ADAA TENT GDGARGDDVAGSGPGSESVEVGGGVAVEGG AP AE
Sbjct: 426 DGLQRILHIRQTAQESVAADAAADAAKANDSVPGENGGDFRATLPAARMEAAAAA---------VRTEPRLLAATWSHINQDRSRQPRCGPKTPEERLKAIEDAKAALRSRVALRKASQSEQ----EFVNQQGTTSRRPVSLGRSELGSSSPISSSFGGSASAIGSRSSRGG---------GGG-----QTPTFAVTHPTYGEQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASSGGAEAADQGLGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEAPGGLLMTGRRGKVHLSGSYTEAAXXXXXXXXXXXXXXXXXXXXXXXXVSPTNKSAFGTPPRVARSGSASEGRYLHSPPPGPLLVHPQ------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXSDFAWSKVGAFPFGQG---------------PRTASSFPVGNGXXXXXXXXXXXVGFRATADGEGRAXXXXTTAGAAGASSLSGVGSIADIGGDLGDGNAPVSPIVRMPAEEFSARSLGGMFGAKSQEEVEAEEVWQRGSTALMREDTISPPAHSPSXXXXXXXXXXXXXXXXXXXXXXGVPSTARPSTSAPXXXXXXXXXXXXXXXXXXXXXXXXXX----FSSVEAASKDVGDSLSGKGGSERARPGNQKWREIRDKALAANGGSFTTARRLANSAASPKPKLEFKRSALPTLGQLRRNSVSPTPSLLAGGVRKGSIIRKSKSDCSGDEGGEXXXXXXXXX--IRSIGTPEEEEERMQAKRREVAEKKAIAARAVAARDLATQRAAEAARXAEAAVTNAEELAAAVARGKAAQSPGTDTPAVATTAPPTIVVQAAAPPVGNEQHHPEGGAVEVVAPAAADXXXXXXXXXXXSGLLPVAEREATDGLKDDGLVAATVSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPGPVPMAVSGAESSAESTGVAQQQAEPAPALLEPTGEGEAATAA--EGGVAPTSTAVLTPTGGTPXXXXAVAVPATVVAATPAVT-----LPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKRAVSTSPCASPRILYGGRDFRARLLAPGLGAGGTLGGRRELPVRAGDGTGEETSPVKSPGLSRIQSEGGLTNIVEAKSSFAVKQRGLVAGRPSRERSGFVAADTVKKGLGPAGAFAGNSNWRVEASREKEKSAADVKGDGHGGFHNPMAALRAQQQXXXXXXXX--ARRVRTGSEDWQTPPATSAGVDEAGGGISRVSSPSSEPTSTTSPRASGMEAAGTPADPAPAPLAMPAWMLSKGISGAGGRALRSPPGGRLLRSRVSPARGSPAGRRHGFGSGGDLLSRGSVGRPLLSSSSTTSSPDRPAPALVXXXXXXXXXALPTEPGKDEDDASARDTAADAA-XXXTENTGGDGARGDDVAGSGPGSESVEVGGGVAVEGGTAPDAE 1835
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Match: A0A6H5JVW4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW4_9PHAE) HSP 1 Score: 375 bits (962), Expect = 1.010e-108 Identity = 294/352 (83.52%), Postives = 297/352 (84.38%), Query Frame = 1
Query: 4 DGLQRILHIRRTAQESVAADTAAHAAKVNDSVPGESGGDFRANLFAARTEAAAAAAAGGPVPAAVRTEPRLLAATWSHINPDRSKQPRGGPKTPEERLKAIEDAKAALRSRVALRKASQSEQASL------------QEFVNQQGTTSRRPVSLGRSELGSSSPISSSFGGSASAIGSRSSRGGDLDISVGASGGXXXXXXQSPTCAVRHPAYGEQP------LQQQXXXXXXXXVKPSXXXXXXXXXXXXXEGTAPVSSGGAEAADQGLGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMTLSGGGAVALASPGKDRGFSDGEAPGGLLMTGRRGRVHLSGSYTEAA 1005
DGLQRILHIRRTAQESVAAD AA AAK NDSVP ++GG FRANL AARTEAAAAA GGP PAAVRT PRLLAATWSHINPDRSKQPRGGPKTPEERLKAIEDAKAALRSRVALRKASQSEQASL QEFVNQQGT SRRPVSLGRSELG SSPISSSFGGSASAIGSRSSRGGD DISVGA G XXXXXXQSPT AV HPAYGEQP XXXXXXXX XXXXXXXXXXXXX+GTAP SSGGAEAAD GLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSGGG VAL SPGKDRG SDGEA GGLLMTGRRGRVHLSGSYTEAA
Sbjct: 350 DGLQRILHIRRTAQESVAADAAADAAKANDSVPRDNGGGFRANLPAARTEAAAAA--GGPAPAAVRTLPRLLAATWSHINPDRSKQPRGGPKTPEERLKAIEDAKAALRSRVALRKASQSEQASLVPFMERAIEGARQEFVNQQGTISRRPVSLGRSELGRSSPISSSFGGSASAIGSRSSRGGDFDISVGARG-XXXXXXQSPTFAVTHPAYGEQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGTAPASSGGAEAADHGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGGGVVALVSPGKDRGVSDGEARGGLLMTGRRGRVHLSGSYTEAA 698
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Match: D7FXL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL0_ECTSI) HSP 1 Score: 340 bits (872), Expect = 1.120e-98 Identity = 412/608 (67.76%), Postives = 414/608 (68.09%), Query Frame = 1
Query: 4744 MDSAATRGGEAEESSADAAATEPANGGLQALGRFLFGARTESSRTVADDAGDAAPAASATAATGVVIAEGEGKPSESARAAPTPAGADAVSLRDCGEPTKAEVVGDQALELAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECADEADDGGTDAGVG-AAXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGAAMAVAPTDPAAAGTTVDGDDVSAEEGGDVPTPALPAVXXXXXXXXXXXXXXXXXXXXXX-QGSAAQQADSTAADFTKSFPDGDVVTPEPVTAVVATGEEPTTTAPNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSLLTRGRKSSRGSGSGRDGETGSNSGSKSGGLGAGGSSYSRSGSKGLLAMGASLLSGERKTGLAALGSKGTPAKTARRALLQETKQKRTSESKPRQGIFETLRQRSSGNMAESTSSXXXXXXXXXXXXXXXXXXXSLTRGQSPTVPATSTRQGAPSTRAPGGGRDKSTATXXXXXXXXXXXXXXXXXXVPSQGRNEEGANAAXXXXXXXTDGLLDGXXXXXXXXXXXXXXXXXEEPDFWSKYGVIDQDALDEDAEIEI 6561
MDSAATRG AEESS DAAATEPA GGLQALGRFLFGARTES RTVADDAGDAAPAA AATGVV AEGEGKPSESAR KAEVVGDQALELAAAVA XXXXXXXXXXXXXXXXXXXXXXXXXXX CADEADD GTDAGV AA XXXXXXXXXXXXXXXXXXXXXXXXXX TVDGDDVSAEEGGDVPTP LPAV QGS AQQADS AD TKSFPDGDVV PEPVTAVVATGEEPTT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LL RGRKSSRGSGS RDGETG N+GSKSGGLGAGGSSY GSKGTPAKTARRALLQETKQKRTSESKPRQGIFETL RQGAPSTRAPGG RDKS XXXXXXXXXXXXXXXXXX GR+E XXXXXXXTDGLLDG XXXXXXXXXXXXXXX EEPDFWSKYGVIDQDALDEDAEIEI
Sbjct: 1 MDSAATRGVVAEESSVDAAATEPATGGLQALGRFLFGARTESGRTVADDAGDAAPAA---AATGVVAAEGEGKPSESARXXXXXXXXXXXXXXXXXXXAKAEVVGDQALELAAAVAVAAAEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXX---CADEADDAGTDAGVVLAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDGDDVSAEEGGDVPTPTLPAVVESPAVDASEDPPQQRDEERVEKQGSPAQQADSATADVTKSFPDGDVVVPEPVTAVVATGEEPTT----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIRGRKSSRGSGSSRDGETGWNNGSKSGGLGAGGSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKGTPAKTARRALLQETKQKRTSESKPRQGIFETL------------------------------------------------RQGAPSTRAPGGRRDKSXXXXXXXXXXXXXXXXXXXXXXXXXGRSEXXXXXXXXXXXXXTDGLLDGVXXXXXXXXXXXXXXXDEEPDFWSKYGVIDQDALDEDAEIEI 550
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Match: A0A6H5L1Z8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z8_9PHAE) HSP 1 Score: 118 bits (296), Expect = 9.080e-26 Identity = 95/115 (82.61%), Postives = 97/115 (84.35%), Query Frame = 2
Query: 1379 QPSLARGEDGCRWSFRRVPSLLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRGVKSVLFLSDKGTCPRLHRNRCPLSYSRGRHRASRWGTPAAAA------WAFEQ*QTERG 1705
Q SLARG GCRWSFRRVPSLL XXXXXXXXXXXXXXXXXXXXXXXXXX TSRGV+SVLFLSDK TC RLHRNRCPLS+SR RHRASRWGTPAAAA WAFEQ QT RG
Sbjct: 125 QSSLARGGHGCRWSFRRVPSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TSRGVQSVLFLSDKWTCLRLHRNRCPLSFSRKRHRASRWGTPAAAAAPAAAAWAFEQQQTGRG 238 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1635.4593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1635.4593.1 >prot_Ecto-sp13_S_contig1635.4593.1 ID=prot_Ecto-sp13_S_contig1635.4593.1|Name=mRNA_Ecto-sp13_S_contig1635.4593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2188bp QDGLQRILHIRRTAQESVAADTAAHAAKVNDSVPGESGGDFRANLFAARTback to top mRNA from alignment at Ecto-sp13_S_contig1635:2034..15916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1635.4593.1 ID=mRNA_Ecto-sp13_S_contig1635.4593.1|Name=mRNA_Ecto-sp13_S_contig1635.4593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13883bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1635:2034..15916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1635:2034..15916- >mRNA_Ecto-sp13_S_contig1635.4593.1 ID=mRNA_Ecto-sp13_S_contig1635.4593.1|Name=mRNA_Ecto-sp13_S_contig1635.4593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=6564bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1635:2034..15916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |