mRNA_Ecto-sp13_S_contig1629.4557.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 194 bits (493), Expect = 1.620e-56 Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LL+LLQG+AREM A+PTDTPHGVPHVL++LEQV+QHL +A+ G PRLVVL DVWEREVVDALL LGLKVL+TTRDRS + V GG LELGDMTEEEALELLLKTS TVGQPG++VRTQ+TK
Sbjct: 79 KNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTK 203
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 193 bits (491), Expect = 2.560e-54 Identity = 97/125 (77.60%), Postives = 109/125 (87.20%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
KKRLL LLQG+ +MGA+PTDTPHGVPHVLD+LEQVQ+HLG +A+TG PRLVVL DVWEREVVDALLPLG KVL+TTRDRS + V CLELGDMTEEEALELLLKTS TVG+PG+ VRT +TK
Sbjct: 215 KKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTK 339
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 187 bits (474), Expect = 5.190e-52 Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LLALLQG+A ++GA+PTD PHGVPHVLD LEQVQQHL +A+TG PRLVVL DVWEREVVDA +PLG KVLLTTRDRS + + G LELGDMTEEEALELL KTS TVGQPG+DVRT++TK
Sbjct: 338 KSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTK 462
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.120e-51 Identity = 92/125 (73.60%), Postives = 105/125 (84.00%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LLALLQG+AREMGA+ TD PH VPHVLD LEQV+QHL +A+TG +PRLVVL DVWEREVVDA +PLG KVLLTTRDRS + V G LE+GDMTEEEALELL K+S VGQPG+DVRT++TK
Sbjct: 284 KSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTK 408
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.070e-47 Identity = 89/125 (71.20%), Postives = 103/125 (82.40%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LLALLQG+AR++GA+PTD P GVP VLD+LEQV+QHL + +TG RLVVL DVWEREVVDA +PLG KVLLTTRDRS + V G LELGD+TEEEALELL KTS VGQPG+DVRT++TK
Sbjct: 321 KSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTK 445
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.420e-47 Identity = 89/124 (71.77%), Postives = 100/124 (80.65%), Query Frame = 2
Query: 5 KRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LL LQG+AREMGA+PTD PHGVPHV D+LEQV QHL + + G PRLVVL DVWEREVV A L +GLKVL+TTRDRS + V GG LELGDM E+EALELL KTS TVGQPG+ VRTQ+TK
Sbjct: 316 KSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTK 439
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 170 bits (430), Expect = 4.470e-46 Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLG-IMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LL LLQG+AREMG +PTD PH VP VLD+LEQVQQHL ++A+TG PRLVVL DVWEREVVDAL+PLG KVLLTTRD S + V L+LGDMTEEEALELL KTS TVGQPG+ VR ++TK
Sbjct: 295 KNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTK 420
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 169 bits (429), Expect = 5.960e-46 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTVGQPGNDVRTQITK 376
K LL LLQG+ARE+GA+PTD PHGVPH LD+LEQVQQHL +A+T PRLVVL DVWEREVVDA +PLG K+LLTTRDRS + G LELGDMTEEEALELL KTS TV PG+DVR ++TK
Sbjct: 123 KNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVRMKMTK 246
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 147 bits (372), Expect = 7.070e-39 Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTSMTV 337
K RLL LLQG+AREMGA+P PHG P LD+LE V QHL + +TG PRLVVL DV EREVV+ALLPLGLK+++TTRDRS + V GGCLE+GDMTEEEALELL+ S V
Sbjct: 37 KNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAV 148
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE) HSP 1 Score: 132 bits (332), Expect = 5.730e-33 Identity = 83/152 (54.61%), Postives = 97/152 (63.82%), Query Frame = 2
Query: 2 KKRLLALLQGVAREMGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVDALLPLGLKVLLTTRDRSKISVQGGCLELGDMTEEEALELLLKTS--------------MTVGQPGNDVRTQITKFN--MDSGC*ALW 409
K LL L+Q +AREMGA HGVP+VLD LEQV QH+ +A+TG PRLVVL DVWEREVVDALL L LKVL+TTRD S + V G LE DM E+EA+ELLLKTS MTVG+P N + Q+TK M + A W
Sbjct: 171 KTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTSVPKNKALEKLIKAAMTVGRPANFL-AQMTKVREIMTAAAAAAW 315 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1629.4557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1629.4557.1 >prot_Ecto-sp13_S_contig1629.4557.1 ID=prot_Ecto-sp13_S_contig1629.4557.1|Name=mRNA_Ecto-sp13_S_contig1629.4557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp MGASPTDTPHGVPHVLDNLEQVQQHLGIMATTGIYPRLVVLHDVWEREVVback to top mRNA from alignment at Ecto-sp13_S_contig1629:7140..7786+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1629.4557.1 ID=mRNA_Ecto-sp13_S_contig1629.4557.1|Name=mRNA_Ecto-sp13_S_contig1629.4557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=647bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1629:7140..7786+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1629:7140..7786+ >mRNA_Ecto-sp13_S_contig1629.4557.1 ID=mRNA_Ecto-sp13_S_contig1629.4557.1|Name=mRNA_Ecto-sp13_S_contig1629.4557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=357bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1629:7140..7786+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |