mRNA_Ecto-sp13_S_contig16163.4492.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig16163.4492.1
Unique NamemRNA_Ecto-sp13_S_contig16163.4492.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FSN9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN9_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 7.580e-182
Identity = 264/274 (96.35%), Postives = 265/274 (96.72%), Query Frame = 1
Query:   16 IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCK 837
            IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVAL GMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK        DFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTE+VGGHGTFDLVLRPALLRKFFKEQCK
Sbjct:   95 IYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALMGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK--------DFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEFVGGHGTFDLVLRPALLRKFFKEQCK 360          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT12_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 2.190e-172
Identity = 251/279 (89.96%), Postives = 263/279 (94.27%), Query Frame = 1
Query:    1 KPSQQIYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCK 837
            KPSQQIYDDLVDAVTKSTS++AEMMLMDIFVIALEYIKSVALR MTLTH VSA+DVTWVLTVPVCCSEPAKHFMREAATKAGFIKGG+DDE LVLCMEPIAACLALG+RLQWRM D+YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDR FEAYLKAS      DFVLSVAQEAG R+LESFFASSASYRINQAWERAKIGLRS+DHDCRIDLSELSREPLEVT +EMDEGRRLKN GGTE+VGGHGTF+LVLRPALLRKFF  QC+
Sbjct:   70 KPSQQIYDDLVDAVTKSTSKRAEMMLMDIFVIALEYIKSVALRRMTLTHPVSADDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGSDDEDLVLCMEPIAACLALGDRLQWRMGDRYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRQFEAYLKASG-----DFVLSVAQEAGARALESFFASSASYRINQAWERAKIGLRSLDHDCRIDLSELSREPLEVTKDEMDEGRRLKNIGGTEFVGGHGTFELVLRPALLRKFFNNQCE 343          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FRC9_ECTSI (Heat shock protein 70-putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC9_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 1.120e-60
Identity = 112/232 (48.28%), Postives = 142/232 (61.21%), Query Frame = 1
Query:  151 VSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEM--DEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKEQCKK 840
            V    V+WVLTVP CC+ PA  FM +AA +AG I G +D E L +C EP+AACLAL +RL W + D YLV+DCGGGTVDI AF++    PP L+Q+G+     WGST VD  F  +L          F  SVA  AG   LESF      Y++ Q WE AK+GL     +CRID+SE+  E L V+   M  D  R+  N GG + VGG GT +LVL+PALL +FF+ QC +
Sbjct:   35 VKPNRVSWVLTVPACCTAPATKFMSDAAIRAGLINGEDDAEHLTICKEPVAACLALEDRLDWSVNDMYLVVDCGGGTVDICAFKLAQLGPPILDQVGDNISESWGSTYVDEQFRVFLMT--------FADSVAPRAGHFQLESF-ERDGMYKVLQNWEEAKVGLSVDKPECRIDMSEMV-EALGVSQPAMAMDTARKKTNNGGQDLVGGSGT-ELVLKPALLTRFFRTQCDR 255          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JDD7_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDD7_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 2.210e-57
Identity = 116/266 (43.61%), Postives = 155/266 (58.27%), Query Frame = 1
Query:   34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMT-LTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKE 828
            ++V K +  ++EM L  I    L + +  AL+ +      VSA  V WVLTVP   S+     +R +A  AG +   +D EGL  C EPIAACLA  +RL W+    YLV+DCGG TVDI    V  +    L QL +   GPWGS  +D LF+ +L+         F+ S A  AG+R++ SF  SSA  RI QAWE +K+G +  + +CRIDL+EL   PLEVT E+MD  R  KN  G E VGG+GT  LVL+PA +RK F++
Sbjct:  121 ESVVKCSRNRSEMELAKIMFYLLMHARDAALKNLPGAGKPVSAASVNWVLTVPASLSDRQWETVRNSAVMAGLVNDWHDREGLKFCPEPIAACLAFQDRLDWQAGKTYLVVDCGGVTVDIHVVGVCDTEKRELCQLLKGRSGPWGSETLDILFDEFLRG--------FIASAASGAGKRAITSFLNSSAKLRIMQAWETSKVGWKDKNDECRIDLTELGNYPLEVTMEDMDRARDDKNGHGEELVGGYGTSVLVLKPAWMRKAFQQ 378          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FTE4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE4_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.510e-49
Identity = 105/274 (38.32%), Postives = 152/274 (55.47%), Query Frame = 1
Query:   31 VDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHA--VSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQ-----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAG-ERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVGGHGTFDLVLRPALLRKFFKE 828
            +D   K +  ++ + LM+I V  L +++  AL  ++      ++ + V WVLTVP    E  +  MR AA  +  +  G+DDE LV C E IAACLA  + L      W + D YLV+DCGG TVD+ A  V       L  + E + GPWG+ N D+ F+  L+         F    A E    R++ +F +SSA  RI QAWE +K+G +  + +C I+++E+   PLEVT E MD  R  +NR G + VGGHGT  LVL+PA ++K F+E
Sbjct:  117 LDTPVKCSRNRSVVELMEILVYLLNHVRDAALLNLSTAGVPPMTVDGVKWVLTVPASLPEQQQEAMRTAAVMSSLVDDGHDDEHLVFCPEAIAACLAFQDNLSQDSLPWNVGDIYLVVDCGGVTVDLHAVGVCDMEKRELSLMHEGTSGPWGAENADKQFDILLQR--------FARCAAPEGTTNRAMANFLSSSAKLRIMQAWETSKVGWKDKNDECWINVTEMKDYPLEVTIEGMDRARNNENRHGEQLVGGHGTCFLVLKPAWMKKAFQE 382          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.510e-32
Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 1
Query:   34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLK 504
            DA   S   K  + L+ +  +ALEYIK V +  +    +H + A D+ WVLTVP   S   K FMR AA +AG I+  ND E L LC+EP AACL +     N  +W    K +V+DCGGGTVDI+   V+   P  LE+L E +GGPWGST  D  F+ ++K
Sbjct:  115 DAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.770e-31
Identity = 93/255 (36.47%), Postives = 139/255 (54.51%), Query Frame = 1
Query:   85 IFVI--ALEYIKSVALRGMTLTHAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALGNRLQ----WRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTE--YVGGHGTFDLVLRPALLRKFFK 825
            IFV+  A+EYIK+  L  +++        + WV+TVP   S   K FMR A+ +AG I   ND +GL LC+EP AACLA+ +  Q    W   DK +V+DCGGGT+DI++  V SS P  L +L E  GG WGS+ VD  F+A+L+        +F  + +   G   LE    +   + +   WER K  L       R+ + +++ + LE++  E++E R+  N    +  +VGG    +LVL PAL+  FF+
Sbjct:  132 IFVVSKAIEYIKNQILDRVSMIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQ--------EFFDNAS--GGMTRLEG---THELFAVTVEWERQKTRLAR-GASLRVSIGDIA-DLLELSPREIEELRKFHNDPKPKELHVGGTRR-NLVLPPALVESFFR 370          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.220e-30
Identity = 95/284 (33.45%), Postives = 138/284 (48.59%), Query Frame = 1
Query:   34 DAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTL--THAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLALG----NRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDH----------DCRIDLSELSREPLEVTTEEMDEGRRLKNRGGTEYVG---GHGTFDLVLRPALLRKFFKE 828
            DA   S  +K  + L+ +  +ALEYIK V +  +    +H + A D+ WVLTVP   S     FMR AA +AG I+  ND E L LC+EP AACL +     N  +W    K +V+DCGGGT+DI+   V+S+ P  LE+L E +GGPWGST  D  F+ ++K          +L    E   R       S+  + +   WE  K      DH             +DL  +S +  E + ++ +E   ++ + G+       G G   + L P L+  FFKE
Sbjct:  115 DAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKE---------LLRCTDEQWAR----LDKSTEMFELMADWEAKKT-----DHYPGKNVWISIAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGSRAPAKAEGMGR-RVSLTPELVSNFFKE 379          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.520e-29
Identity = 99/277 (35.74%), Postives = 141/277 (50.90%), Query Frame = 1
Query:   40 VTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLT--HAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLAL---GNRLQWRMRDK-YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDC--RIDLSELSREPLEVTTEEMDEGRRLKNRG--GTEYVGGHGTFDLVLRPALLRKFFKEQCKK 840
            +T+S   +  + L+ +   +L Y K   L  ++ T    V    V WVLTVP    + AK FMR+AA +AG I   N    L LC+EP AACLA     N L      K  +VIDCGGGTVDI+A ++IS  P +LE++    GG +GST VD  F  +LK  +LG     + +       R+L S         I  +WER K   + +D     R++LSEL+    +VT ++M+  RR  N G   + +VGG   F++ L   L+  FF    +K
Sbjct:  107 MTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMIDRMNSTR-LRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKG-FLGEKFQEIETT------RTLLS---------IMMSWERKKATFQGLDSAAVWRLNLSELA--GYDVTNQDMENLRRSYNDGKPSSLFVGGE-KFNVTLPTTLVTSFFTPTLQK 363          
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.290e-26
Identity = 96/284 (33.80%), Postives = 139/284 (48.94%), Query Frame = 1
Query:   19 YDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLT--HAVSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPIAACLAL---GNRLQWRMRDK-YLVIDCGGGTVDISAFEVISSAPPSLEQLGEASGGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSASYRINQAWERAKIGLRSVDHDC--RIDLSELSREPLEVTTEEMDEGRRLKNRGGTE--YVGGHGTFDLVLRPALLRKFFKEQCKK 840
            + D    +T+S   +  + L+ +   +L Y K   L  ++ T    V    V WVLTVP    + AK FMR+AA +AG I   +    L LC+EP AACLA     N L     DK  +VIDCGGG VDI+A ++IS  P  L+++    GG +GST VD  F+ +LK  +LG     + +       R+L S  +S         WE  K   +  D     R++ SEL+    +VT ++M+  R   N G     +VGG G F++ L   L+  FF+    K
Sbjct:  104 HTDFASVMTESVEARHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMIDRVHSTR-LRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLK-EFLGDKFQGIQTT------RTLVSIMSS---------WESKKATFQGTDSAAGLRLNFSELAE--YDVTIQDMENLRTSYNDGKPPSLHVGG-GKFNVTLPTTLVTSFFEPTLDK 367          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16163.4492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSN9_ECTSI7.580e-18296.35Heat shock protein 70-putative n=1 Tax=Ectocarpus ... [more]
A0A6H5JT12_9PHAE2.190e-17289.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRC9_ECTSI1.120e-6048.28Heat shock protein 70-putative n=1 Tax=Ectocarpus ... [more]
A0A6H5JDD7_9PHAE2.210e-5743.61Protein kinase domain-containing protein n=2 Tax=E... [more]
D7FTE4_ECTSI1.510e-4938.32Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K4X7_9PHAE1.510e-3244.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNB5_ECTSI3.770e-3136.47Heat shock protein 70-putative n=2 Tax=Ectocarpus ... [more]
D7G266_ECTSI2.220e-3033.45Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
D7G6V4_ECTSI4.520e-2935.74Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JSM6_9PHAE1.290e-2633.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16163contigEcto-sp13_S_contig16163:86..3212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score104.4
Seed ortholog evalue9e-20
Seed eggNOG ortholog55529.EKX54611
Preferred nameHSPA12A
Model size843
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0101@2759
Cds size843
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16163.4492.1prot_Ecto-sp13_S_contig16163.4492.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig16163 86..3212 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462853.0916789-CDS-Ecto-sp13_S_contig16163:85..1721681462853.0916789-CDS-Ecto-sp13_S_contig16163:85..172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 86..172 -
1681462853.1059964-CDS-Ecto-sp13_S_contig16163:521..6621681462853.1059964-CDS-Ecto-sp13_S_contig16163:521..662Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 522..662 -
1681462853.1149092-CDS-Ecto-sp13_S_contig16163:883..9701681462853.1149092-CDS-Ecto-sp13_S_contig16163:883..970Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 884..970 -
1681462853.1248007-CDS-Ecto-sp13_S_contig16163:1322..14931681462853.1248007-CDS-Ecto-sp13_S_contig16163:1322..1493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 1323..1493 -
1681462853.1389034-CDS-Ecto-sp13_S_contig16163:2033..21171681462853.1389034-CDS-Ecto-sp13_S_contig16163:2033..2117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 2034..2117 -
1681462853.1489165-CDS-Ecto-sp13_S_contig16163:2639..27951681462853.1489165-CDS-Ecto-sp13_S_contig16163:2639..2795Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 2640..2795 -
1681462853.1590536-CDS-Ecto-sp13_S_contig16163:3095..32121681462853.1590536-CDS-Ecto-sp13_S_contig16163:3095..3212Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig16163 3096..3212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig16163.4492.1

>prot_Ecto-sp13_S_contig16163.4492.1 ID=prot_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp
KPSQQIYDDLVDAVTKSTSRKAEMMLMDIFVIALEYIKSVALRGMTLTHA
VSAEDVTWVLTVPVCCSEPAKHFMREAATKAGFIKGGNDDEGLVLCMEPI
AACLALGNRLQWRMRDKYLVIDCGGGTVDISAFEVISSAPPSLEQLGEAS
GGPWGSTNVDRLFEAYLKASWLGHNCDFVLSVAQEAGERSLESFFASSAS
YRINQAWERAKIGLRSVDHDCRIDLSELSREPLEVTTEEMDEGRRLKNRG
GTEYVGGHGTFDLVLRPALLRKFFKEQCKK*
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mRNA from alignment at Ecto-sp13_S_contig16163:86..3212-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig16163.4492.1 ID=mRNA_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3127bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16163:86..3212- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCCCTCCCAGCAGATCTACGACGACCTGGTCGACGCCGTCACGAAGAG CACGAGCAGGAAAGCAGAGATGATGCTGATGGACATCTTCGTCATCGCTT TGGAGTACATTAAGAGTGTGAGATGCATACATACATACATGCTGCTGTAA AGACGATGCGTTTGTGCCGAGGTCGCTTGTTGGCCTCTGTCGTCTTTGCC TTCCCCCCCGCCTTACCCTGTCACGCCCTCCCCGTCTTTGAGCTCAGGCC ACTCTGGCGCGTTCCGAGTGTTCCGCGTTCTGGCTCTGCGCATGGGGACG CGCAGTGCACGCTCCTTCCTCAGAATGGCCCTCCCGTTCTGCTTTGGCAG CTGCTCTGAAACTTGTCGCCAATGCCCCCGTGTCCCGCGCGTCGATGCCA CCCCTTACCGCCACCAGGTTGCCCTCAGGGGCATGACACTGACCCACGCG GTCTCCGCCGAAGACGTGACGTGGGTGTTGACGGTGCCCGTCTGCTGCAG CGAGCCGGCCAAGCACTTCATGAGGGAGGCCGCGACGAAGGCCGGCTTCA TCAAAGGCGGAAACGACGACGAGGTGACCATGGATTAATGGCAGTGCTTC GCTCCGCCGCACGCCCGGCGCGGAACGCTCTTTTGTGTCATCTTGGGTCA CAGGCATTAGGCTGATGGCGAAAGATGCAGCCCTGTTTTGACGCTTGCTC ATGATGAAAAAAGGTGGATTTGACCGGTGTTTCTATGATACCCAAGCGAA TGCCAGCGCCATTTTCGGAGCCAAGAAGTGTGTTGCCTTTTTTTGACAAA CATGAACTACGGTTGCTGGACGTTTTTGCCCGGAGGGATGGTCAATTATT TGTATGGTTAGGGCAAACCAGCAAAGGTTGATCCAAAGCAGGCGTTTGCT ATTGATGTGCGATCCCTGGCGCGAGACAGTTGGCACACACACATACGCAC ACATTCACACACACAGACTGACGTCTCTTCTTTGGTCACCCGGTTAGCGC GGTCGATACTAATAATTGACACACAAGCACACACAACCGGTCGTGTGCTC CCCGTCCGGTAATACTGTTGTTTTTCGCGTTGTCTTCCCCCCAAGGGCCT CGTTCTGTGCATGGAGCCAATCGCCGCCTGCCTGGCCCTTGGAAACAGGC TACAATGGAGGATGAGGGACAAGTACCTGGTGAGTCTGTCTGTCCGTATA GTATTCACGCGCAGAGACGAGCAGTTCACGCGGAAATGCAAACGCTGCCG TGTAATTTGTCTTCTGTGGCGCACGACAGCTTGTTTGTGGGTTCTTTTGT CTTGATCCAGTCCTATCGATTTTGTAAATATGGACTCGATAGACCCGCGC CCGTCCCTCGAGCCCCGTTCTTTCTGCTGAGAGGGCGGTGTATTGCTTAT CTCGCGGGATTATGTTGACATGCCACCTGCATGCTTGGCTTCAGACACCG AAGGCCGAAAGGGCACATAATCCGCCGCTGGACCGTCGAGCCCGCGGACA AACTAAAACGAGCCCATGTATTCCTCGAGGCGGTGGCTGTCACCGCAGCA AGCAAAAAAAAAGTGAAACGAGAGTGGCCCCCTCCTGGACAAATTTGTTG TCTGCTTGTGGAGCCACCGGTCCAGTTGGGTCAGGTGCGAGGCTTGCACG CGCGCAAGAATTTCCCTCCACTCACTACTGTACCTGTTGCGGCGACGGCG ACCACCACGCTGTCACCAGGTGATCGATTGCGGCGGCGGCACGGTGGACA TTTCCGCGTTCGAGGTGATCAGCAGCGCACCGCCGAGCCTCGAGCAGCTC GGAGAGGCGAGCGGCGGGCCGTGGGGGTCCACGAACGTGGACAGGCTGTT TGAGGCTTACCTGAAGGCGAGTTGGCTTGGCCATAACTGTGTCCCCACAT CGCAAGAAAAAAAGATACCCGACAAACATTGTACAGACACACCCGACCTA TGTACATGCACATATGTATCGTTTTGAGCTCTGGAGGCTGGCTCCTGTTC TATGTGTGACTTGGTATAGGCAGGCGATGCTCTGCAGCGGGGGTGTTACG CAGCGAAGAAAACGAATCCCGCCTGGCGAGCGAGTAAATGCTGCTCGTAT TCCCCAGTTCTGTCGGTTAATCGAGTTGCAAGCCCACAACAGCATCTATG TATGCAGCTGCCTTGATTTCTGCTGTTGCCTTTGTAACCAGCGCACAATT TCCGTCAACTCGCCGCCACCGCGTGTGTCCCCCTACGACTAGGATTTCGT ACTATCCGTTGCTCAAGAAGCCGGGGAGAGGAGCCTGGAAAGCTTCTTCG CCAGCTCGGCCTCATACCGGATTAACCAGGTGCGATGAATGTGCGCGTGA ATTAGTACAGAGCAGGGTTTCTTCCAATTTTCCTGGTTCGTTCTTGAACA AGGACATGCAGTGGTCAATGCACTAAATCACCCCCCCCCCCCCTTAGGTG AGCGGTCTAACGACCACAGCATGCACGGCTATGAGTATTCCCCTCCCCCC TTTTTTGCTGCTGCGGTCCATGCATCCACACTGGAAACGACTCGCGGCAG GCTTGGGAAAGAGCCAAGATCGGCTTACGAAGCGTTGACCACGACTGCCG GATCGACCTGAGCGAGCTGAGCCGTGAGCCGTTGGAGGTGACGACGGAAG AAATGGACGAAGGCCGGAGACTCAAGAACAGAGGGGGCACGGTGAGGGGG CGAGGTTTACTCGCTAGGCGTACGATTGTTTGACTGTACTGAGATCATGA GGCTCAAGATTGTTCGGCTGTACTGAGATCACGAGGCTTAAGATTGTTGC CTTTGCTGAGACGATCGTCATGGAGCGGGTGCGGCAGTATGCAACGTTTC GCCACTTTTGTTTTGGTGCGGGTCTCATGGAGCAGTACCGCGTGATAAAT GCAGCAGTGCAATCCCATGGGATGTTCCGTGTCTGAGGAAACCAAGACCT CAGTGGGGGGGAGATACCGCGCCCATGCACCGCGTTCACGTGTCCCTTTC GCGTTTGTGGTCTCTGTCCGCCGAAAAAAACCCCACGCAGGAGTACGTCG GCGGCCATGGGACGTTTGACCTCGTCTTGCGACCAGCCTTGCTGCGCAAG TTCTTCAAGGAGCAGTGCAAGAAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig16163:86..3212-

>mRNA_Ecto-sp13_S_contig16163.4492.1 ID=mRNA_Ecto-sp13_S_contig16163.4492.1|Name=mRNA_Ecto-sp13_S_contig16163.4492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=843bp|location=Sequence derived from alignment at Ecto-sp13_S_contig16163:86..3212- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCCCTCCCAGCAGATCTACGACGACCTGGTCGACGCCGTCACGAAGAG
CACGAGCAGGAAAGCAGAGATGATGCTGATGGACATCTTCGTCATCGCTT
TGGAGTACATTAAGAGTGTTGCCCTCAGGGGCATGACACTGACCCACGCG
GTCTCCGCCGAAGACGTGACGTGGGTGTTGACGGTGCCCGTCTGCTGCAG
CGAGCCGGCCAAGCACTTCATGAGGGAGGCCGCGACGAAGGCCGGCTTCA
TCAAAGGCGGAAACGACGACGAGGGCCTCGTTCTGTGCATGGAGCCAATC
GCCGCCTGCCTGGCCCTTGGAAACAGGCTACAATGGAGGATGAGGGACAA
GTACCTGGTGATCGATTGCGGCGGCGGCACGGTGGACATTTCCGCGTTCG
AGGTGATCAGCAGCGCACCGCCGAGCCTCGAGCAGCTCGGAGAGGCGAGC
GGCGGGCCGTGGGGGTCCACGAACGTGGACAGGCTGTTTGAGGCTTACCT
GAAGGCGAGTTGGCTTGGCCATAACTGTGATTTCGTACTATCCGTTGCTC
AAGAAGCCGGGGAGAGGAGCCTGGAAAGCTTCTTCGCCAGCTCGGCCTCA
TACCGGATTAACCAGGCTTGGGAAAGAGCCAAGATCGGCTTACGAAGCGT
TGACCACGACTGCCGGATCGACCTGAGCGAGCTGAGCCGTGAGCCGTTGG
AGGTGACGACGGAAGAAATGGACGAAGGCCGGAGACTCAAGAACAGAGGG
GGCACGGAGTACGTCGGCGGCCATGGGACGTTTGACCTCGTCTTGCGACC
AGCCTTGCTGCGCAAGTTCTTCAAGGAGCAGTGCAAGAAGTGA
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