mRNA_Ecto-sp13_S_contig1605.4425.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 602 bits (1551), Expect = 1.410e-206 Identity = 300/320 (93.75%), Postives = 307/320 (95.94%), Query Frame = 1
Query: 1 LSDMLNAWVYALSVEKWSDMTVVVDENQMKQVDCGEESGGGAQAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGE-ASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGARGPE 957
+++MLNAWVYALSVEKWSDMTVVV ENQMK VDCGEESGG AQ GWDCIFKPM HLCTFPSAESWKEYMVSKDLPEA+LVE ARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKV+ G ASMYLCKEYLEAAVEF EGDDSQLSVGDIKGIWVASDEPKVIAKVK+IAPDYLPNVSE+DIFWASGGVEGGPEI RTATRTDKETYADFVYT ADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRG RGPE
Sbjct: 139 INNMLNAWVYALSVEKWSDMTVVVGENQMKWVDCGEESGGEAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAELVEVARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGVRGPE 458
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 592 bits (1525), Expect = 8.940e-203 Identity = 297/319 (93.10%), Postives = 308/319 (96.55%), Query Frame = 1
Query: 1 LSDMLNAWVYALSVEKWSDMTVVVDENQMKQVDCGEESGGGAQAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGARGPE 957
+++MLNAWVYALSVEKWSDMTVVVDENQMKQVDC EESGG AQAGWDC+FKPM HLCTFPSAE E+MVSK LP+ADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLC+EYLE AVEF EG+DSQLSVGDIKGIWVASDEPKVIAKVK+IA DYLPNVSE DIFWASGGVEGGPEIERTATRTD+ETYADFVYTFADLQQLTAADLFVGTFSSN+GRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGARGPE
Sbjct: 135 VNNMLNAWVYALSVEKWSDMTVVVDENQMKQVDCEEESGGEAQAGWDCLFKPMPHLCTFPSAE---EHMVSKGLPKADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGARGPE 450
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 179 bits (454), Expect = 5.310e-47 Identity = 94/185 (50.81%), Postives = 115/185 (62.16%), Query Frame = 1
Query: 343 MAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSID 897
MA+ LW N+TPWLQ DV DVF+ PF+GLH+RRGDKV +GEA KEYL AA FF+ SQ DI+ IWVASD+ KV+ +V+ IA Y PNV +EDI W SGG GG T T + Y FV FADL+ L A LFVGT++SN+ RL+ LLRE I R S +S+D
Sbjct: 105 MARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKASQ-DKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGA----VTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI) HSP 1 Score: 107 bits (268), Expect = 2.090e-23 Identity = 60/164 (36.59%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 442 FLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRR 930
++GLHIRR DK + E K YL AV + + ++ +I GIWV+SD+ V +VK++A ++ P ++ + + V GG ++ D+ +Y VY A+L+ L + +F GTFSSN+GR++ L+R+++ + D SAVS+D P W AGR+R R
Sbjct: 6 YVGLHIRRTDKAN--EVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLY----VTGGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLNMPDE-SAVSVDFPAWFAGRQRHR 162
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A6J1SG56_FRAOC (alpha-(1,6)-fucosyltransferase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SG56_FRAOC) HSP 1 Score: 82.0 bits (201), Expect = 2.060e-12 Identity = 72/284 (25.35%), Postives = 122/284 (42.96%), Query Frame = 1
Query: 127 QAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASP----------SDVFQESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPWRAGRRRRRAMRGAR 948
+ GW+ IFKP+S C +S + D L L ++ P + A L +A+ +T W+ + ++ R P + + + P +G+HIRR DKV EA+ + EY+ A E+F+ S + D + I++ASD+PKVIA+ + PDY + G P+I +TA + + D+ L+ D V TFSS + R+ + +S+ + AS S+D + G + + R A+
Sbjct: 250 KGGWEEIFKPVSDTCLSSEGDSLANWPGKPDTQVLTLPIIDSLLPPRSQYLPPAVPADLA----------PRLARIHGQPITWWVGQFLKYLLRPQPVISELLLNTQNKLGFKGPIVGIHIRRTDKVGT-EAAFHPLDEYMPAVAEWFDQQISNGKIIDKRRIFLASDDPKVIAEARSKYPDYE--------------ILGDPDIAKTAAIGSRYSDRSLYGIIVDIHFLSRCDFLVCTFSSQVCRVAYEIMQSLHVDASASYRSLDDIYYYGGQNAHSWRAAQ 508
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A482VZE0_9CUCU (Alpha-(1,6)-fucosyltransferase n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VZE0_9CUCU) HSP 1 Score: 75.9 bits (185), Expect = 1.340e-10 Identity = 70/248 (28.23%), Postives = 112/248 (45.16%), Query Frame = 1
Query: 127 QAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQDAVR--FHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSD--VFQES--------PFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGR 834
+AGWD IFKP+S C PS ES + + D +V +D + R F P I L + + + W+ + ++ R P V QE+ P +G+H+RR DKV EA+ + +EY+ A E+++ + + +V D + I++A+D+PKVIA K P Y V G P I +TA + + + + D+ L+ +D V TFSS + R
Sbjct: 264 KAGWDEIFKPISDNCVDPSGESVSNWPGNSD---TQVVNLPIIDSLSPRPPFLPLAIPEDLS----------PRLTRLHGDPIVWWVGQILKYLLRPQPKTAAVIQETMTHMGFKRPIVGVHVRRTDKVGT-EAAYHGIEEYMTAVEEYYKQLELKETV-DKRRIYLATDDPKVIADAKSKYPQYE--------------VLGDPTISKTAAISTRYSDSSLFGIINDIHMLSMSDYLVCTFSSQVSR 482
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A1B6KQG1_9HEMI (Alpha-(1,6)-fucosyltransferase n=3 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KQG1_9HEMI) HSP 1 Score: 74.3 bits (181), Expect = 5.350e-10 Identity = 69/257 (26.85%), Postives = 118/257 (45.91%), Query Frame = 1
Query: 127 QAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQ-DAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDV-----------FQESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESI 861
+ GWD +F+P+S CT +A + + + P + L D+V P + ++ IA L +W W+ + F+ R P+ FQ P +G+HIRR DKV EA+ + +EY++A E+++ +V ++K I++ASD+PKV A++KK PDY V G P + ++A + + + F D+ L+ D V TFSS + R+ + +S+
Sbjct: 262 RGGWDEVFQPVSDTCTDTTAAT-----STSNWPGTASTQVVVLPIIDSVSPRPPYLPLAVPQDLAPRIARLHG-DPIVW-----WVGQFLKFLLRPQPNTADLLHTAAERFSFQR-PIVGIHIRRTDKVGT-EAAFHSVEEYMDAVEEYYKQLSLYQTV-EVKRIYLASDDPKVFAEIKKKYPDYE--------------VLGDPTVAKSAAVATRYSDSSFNGIVMDIHFLSLCDYLVCTFSSQVCRVAYEIMQSL 490
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A0A1TTM2_LEPSM (Alpha1,6 fucosyltransferase n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0A1TTM2_LEPSM) HSP 1 Score: 73.6 bits (179), Expect = 9.170e-10 Identity = 72/278 (25.90%), Postives = 122/278 (43.88%), Query Frame = 1
Query: 127 QAGWDCIFKPMSHLCT---------FP-SAESW--KEYMVSKDLPEADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLW-SNVTPWL---QADVDFVTRASPSDVF--QESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGPW 906
+AG++ +FKP+S C P S SW KE V+ D+P D +V P+ + S+ I L W S V ++ Q D+ + ++ D +SP++G+H+RR DKV EA+ + +EY+E E F+ D+ L + ++VASD+P+V+ + +K P Y F+ G + R+A + + + D+ L+ AD V TFSS + R+ + ++ S+D W
Sbjct: 250 RAGFENVFKPLSETCQRIPEVLQGELPLSRSSWPGKEDTVNVDIPIVD----------SVNPRPKHLPPSIPKEIASRIIRLHGDPIVWWISEVLRYILRPQEDLQVLLNSTEEDKLPRDKSPYVGIHVRRTDKVGT-EAAFHPVEEYMEYVEERFKYLDASLGSNVERRVYVASDDPRVLVECRKKFPHYS--------FY------GDATVARSAAVSSRYSSDSLKGVITDIHLLSKADYLVCTFSSQVCRIAYEILQNRFPDGHDRFKSLDDIW 502
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A6L2PGD2_COPFO (Alpha-(1,6)-fucosyltransferase n=4 Tax=Termitoidae TaxID=1912919 RepID=A0A6L2PGD2_COPFO) HSP 1 Score: 73.6 bits (179), Expect = 9.530e-10 Identity = 67/255 (26.27%), Postives = 124/255 (48.63%), Query Frame = 1
Query: 127 QAGWDCIFKPMSHLCTFPSAESWKEYMVSKDLPEADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRA--SPSDVFQES--------PFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESI 861
+AGW+ +F P+S CT PS ++ + KD +VE +D + R P + ++ +A L +W W+ + F+ R + S++ QE+ P +G+HIRR DKV EA+ + +EY+ A E++ + + V D + +++ASD+PKVIA+ ++ P+Y DI P++ +TA + + + + D+ L+ +D V TFSS + R+ + +++
Sbjct: 275 KAGWEEVFLPVSRTCTDPSGQTHSHWPGRKD---TQVVELPIVDSLSPR--PPYLPLAVPKDLAPRLARLHG-DPIVW-----WIGQFLKFLLRPQEATSNMIQEASIKRDFKRPVVGVHIRRTDKVGT-EAAFHPLEEYMAAVDEYYNLLEMKQKV-DRRRVYLASDDPKVIAEARRKYPEY-------DIL-------ADPDVAKTAAVSTRYSDSSLNGIILDIHFLSLSDYLVCTFSSQVCRVAYEIMQTL 502
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Match: A0A1B6GD59_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6GD59_9HEMI) HSP 1 Score: 70.9 bits (172), Expect = 1.870e-9 Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 394 DFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCKEYLEAAVEFFEGDDSQLSVGDIKGIWVASDEPKVIAKVKKIAPDYLPNVSEEDIFWASGGVEGGPEIERTATRTDKETYADFVYTFADLQQLTAADLFVGTFSSNMGRLLVLLRESI 861
D + A+ FQ P +G+HIRR DKV EA+ + +EY++A E+++ SV D+K I++ASD+PKV A++KK PDY V G P + ++A + + + F D+ L+ D V TFSS + R+ + +++
Sbjct: 77 DLLHTAAERFSFQR-PIVGIHIRRTDKVGT-EAAFHSVEEYMDAVEEYYKQLSLSQSV-DVKRIYLASDDPKVFAEIKKKYPDYE--------------VLGDPSVAKSAAVATRYSDSSFNGIVMDIHFLSLCDYLVCTFSSQVCRVAYEIMQNL 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1605.4425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1605.4425.1 >prot_Ecto-sp13_S_contig1605.4425.1 ID=prot_Ecto-sp13_S_contig1605.4425.1|Name=mRNA_Ecto-sp13_S_contig1605.4425.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp MLNAWVYALSVEKWSDMTVVVDENQMKQVDCGEESGGGAQAGWDCIFKPMback to top mRNA from alignment at Ecto-sp13_S_contig1605:10660..16092- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1605.4425.1 ID=mRNA_Ecto-sp13_S_contig1605.4425.1|Name=mRNA_Ecto-sp13_S_contig1605.4425.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5433bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1605:10660..16092- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1605:10660..16092- >mRNA_Ecto-sp13_S_contig1605.4425.1 ID=mRNA_Ecto-sp13_S_contig1605.4425.1|Name=mRNA_Ecto-sp13_S_contig1605.4425.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1605:10660..16092- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |