mRNA_Ecto-sp13_S_contig1602.4410.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A7S3XNY6_HETAK (Protein DPCD (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNY6_HETAK) HSP 1 Score: 136 bits (343), Expect = 6.660e-37 Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 1 LEEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTK--EPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQEREAR 453
+EE+ A + L RRWRS G W++EIGDP + + S + + S +NP FHPRD ++ WEW +RNLPYP +TY ++V++E LVLRT+NKKYFK ++VP L+R G L + H +TLII Y KP ++++ E + R
Sbjct: 38 VEEFSAASGDLLARRWRSADALGRQGAWEHEIGDPPAARGGQASEAAVVEGMFTSRVNPSFHPRDNTECWEWRVRNLPYPLDTYSITVEKEGTELVLRTSNKKYFKRWKVPFLVRLGLLLEDEHIEFDHQN-NTLIIQYAKPTAVLELEADRR 189
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: UPI001BB1808F (protein DPCD-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1808F) HSP 1 Score: 135 bits (341), Expect = 1.530e-36 Identity = 65/149 (43.62%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 1 LEEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQERE 447
+EEYD T L R+WRS G +W+ E+G+ ++P+ G AD L SS NP +DT ++++W IRNLPYP ETY LSVD++ + ++RT+NKKY+K F +P + RAG +L++S M+H+ +TLII+Y+KP I+ E++
Sbjct: 38 VEEYDIKTNDLLVRKWRSKNVLGREGKWEIEVGEQF--RQPASSGEADFLMESSSNPICTRKDTRQAFQWRIRNLPYPIETYSLSVDQDSKCCIIRTSNKKYYKKFVIPDMERAGLSLQQSCFTMAHSN-NTLIITYKKPAEILALEKQ 183
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A6P4ZQP5_BRABE (Protein DPCD n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZQP5_BRABE) HSP 1 Score: 135 bits (339), Expect = 3.060e-36 Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 4 EEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQERE 447
EEYD T L R+WR GG W+ E+GDP + P M T ++ SS NP F RDT K++ W IRNLPYP ETY ++VD + + +++RTTNKKY+K F +P + RAG L + + +H +TL+I+YEKP +++ ER+
Sbjct: 39 EEYDVKTNDLLLRKWRKKGTLGGAGTWEIEVGDPQVFR-PVAMETQGMVE-SSSNPIFTRRDTKKAFMWRIRNLPYPIETYNVTVDTDNRCVIVRTTNKKYYKKFTIPDMDRAGLPLEQRAVNYAH-ANNTLVITYEKPAGVLEMERQ 183
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A7M7PDT1_STRPU (Protein DPCD n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PDT1_STRPU) HSP 1 Score: 133 bits (334), Expect = 5.820e-36 Identity = 64/148 (43.24%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 13 DAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQEREARA 456
D T L R+W+S G +W++EIG+ + P+ G AD L SS NP F +DT ++++W IRNLPYP ETY LSVD++ + ++RT+NKKY+K F +P + RAG L++S M+H+ +TLII+Y+KP I+ E++ A
Sbjct: 4 DVKTNDLLVRKWKSKNVLGREVKWEFEIGEQF--RRPAAGGEADLLMESSSNPIFTRKDTRQAFQWRIRNLPYPIETYSLSVDQDTRCCIIRTSNKKYYKKFSIPDMDRAGLPLQQSDFSMAHSN-NTLIINYKKPAEILALEKQVIA 148
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A6G0XJM7_9STRA (Protein DPCD n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJM7_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.360e-36 Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 16 AVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQEREA 450
++T H RRW++ GG +W YEIG+ P S +L S +NP F R+ + WEW +RNLPYP+ETY +S+D+ Q +V+RTTNKKYFK F++P++ RA L +S SH+ +TL+I YEKP +I+ ER++
Sbjct: 24 SLTTHCVVRRWKAPSTLGGDGKWMYEIGEATPGDGSSEKDIGISL--SGVNPIFLCREAEEVWEWRVRNLPYPKETYLISIDDTTQEIVIRTTNKKYFKRFRIPAMARANLRLDGTSLSHSHSN-NTLVIQYEKPDQVIEDERKS 165
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A067CDT4_SAPPC (Protein DPCD n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CDT4_SAPPC) HSP 1 Score: 133 bits (334), Expect = 1.380e-35 Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = 1
Query: 1 LEEYDAV-TQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQERE 447
+EEY L RRW++T GG W+YEIG+P+P + G L PSS P F R+ + WEW +RNLPYP+ETY + +D++ QT+V+RT+NKKYFK FQ+P+++R L ++ +H+ +TL++ Y+KP +++ E +
Sbjct: 32 VEEYTKDGPPELLVRRWKNTTALGGDGRWEYEIGEPLPAE---GRSRDIGLAPSSTQPTFLCREAATHWEWRVRNLPYPKETYAIGIDDDAQTIVIRTSNKKYFKRFQIPAMVRQSQRLSAAAVSFTHDN-NTLVVHYKKPDAVMAVEHQ 177
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: T0Q6P4_SAPDV (Protein DPCD n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q6P4_SAPDV) HSP 1 Score: 133 bits (334), Expect = 1.380e-35 Identity = 60/139 (43.17%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 31 LECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQERE 447
L RRW++T GG W+YEIG+P+P + G L PSS P F R+ WEW +RNLPYP+ETY +S+D++ QT+ +RT+NKKYFK FQ+P+L+R L ++ +H +TL++ Y+KP +++ ER+
Sbjct: 43 LLVRRWKTTTALGGDGRWEYEIGEPLPAE---GRSRDIGLAPSSTQPTFLCREAPAHWEWRVRNLPYPKETYAISIDDDVQTISIRTSNKKYFKRFQIPALVRQNQRLDAAAISFTHES-NTLVVRYKKPDAVVAVERQ 177
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A7S2WU54_9STRA (Protein DPCD n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WU54_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.420e-35 Identity = 67/155 (43.23%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 1 LEEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQEREARASAV 465
+EE D VT+ L RRW+ K FG W+YE+G+P T S ++ SS NP F RD++ WEW +RN+PYP + Y+LS+DE KQ +VLRT+NKKYFK F +PSL R L S ++ + TL I Y KP I+ E + R +
Sbjct: 32 VEEIDVVTRELVVRRWKVPKAFGKEGGWEYELGEPQKTANSSESLLCES---SSRNPSFVARDSTDFWEWRVRNIPYPIQVYQLSIDETKQEIVLRTSNKKYFKRFYIPSLKRENRKLDPGSLQLVDHTNDTLTIRYRKPLDIVKLEGDERRQKI 183
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A444TWW5_ACIRT (Protein DPCD n=4 Tax=Acipenseroidei TaxID=186622 RepID=A0A444TWW5_ACIRT) HSP 1 Score: 131 bits (330), Expect = 2.470e-35 Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 1
Query: 4 EEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQP-----SSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQERE 447
EEYD T L R+WR G + +WQ E+G+P P+ T AL+P +S NP F +DT S++W IRNLPYP++ Y+LSV++ ++ ++RTTNKKYFK F +P + R +L S+ +H +TLIISYEKP+ I+ E+E
Sbjct: 3 EEYDLKTDELIVRKWRVKNTLGVLGQWQIELGEPAPS-------TVGALEPQLLKENSSNPVFMRKDTKTSFQWRIRNLPYPKDVYKLSVEQTERCCIVRTTNKKYFKKFSIPDMDRCQLSLESSALSFAH-ANNTLIISYEKPKEILTLEQE 147
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Match: A0A1V9ZUR2_9STRA (Protein DPCD n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUR2_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.750e-35 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 1
Query: 1 LEEY--DAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALQPSSLNPCFHPRDTSKSWEWHIRNLPYPEETYRLSVDEEKQTLVLRTTNKKYFKVFQVPSLIRAGFALRRSSAKMSHNGGSTLIISYEKPQSIIDQEREARASAVR 468
+EEY D Q L RRW++ GG +W++EIG+P T + G L PS P F R++ WEW +RNLPYP++TY +SVD++ QT+ +RT+NKKYFK FQVP+L+R G L + H STL++ Y KP +++ ER+ A +R
Sbjct: 32 IEEYTKDGSPQLL-ARRWKAPTALGGDGKWEFEIGEPA-TDDTRGRDIG--LAPSCTTPVFLCRESPTCWEWRVRNLPYPKDTYAISVDDDSQTITIRTSNKKYFKRFQVPALVRGGHRLDAQALSFDH-ANSTLVVQYAKPLDVVELERKTMAELLR 184 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1602.4410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1602.4410.1 >prot_Ecto-sp13_S_contig1602.4410.1 ID=prot_Ecto-sp13_S_contig1602.4410.1|Name=mRNA_Ecto-sp13_S_contig1602.4410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp LEEYDAVTQHLECRRWRSTKPFGGVTEWQYEIGDPMPTKEPSGMGTADALback to top mRNA from alignment at Ecto-sp13_S_contig1602:12175..15078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1602.4410.1 ID=mRNA_Ecto-sp13_S_contig1602.4410.1|Name=mRNA_Ecto-sp13_S_contig1602.4410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2904bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1602:12175..15078- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1602:12175..15078- >mRNA_Ecto-sp13_S_contig1602.4410.1 ID=mRNA_Ecto-sp13_S_contig1602.4410.1|Name=mRNA_Ecto-sp13_S_contig1602.4410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=624bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1602:12175..15078- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |