mRNA_Ecto-sp13_S_contig15811.4284.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: D7FWD0_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD0_ECTSI) HSP 1 Score: 567 bits (1461), Expect = 3.110e-201 Identity = 300/334 (89.82%), Postives = 309/334 (92.51%), Query Frame = 1
Query: 1 MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSLGRSYACLQMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
MKIPPRSAIVNEEVPA N+GESTS GAGAN+QNSEAVC FFPRKGNTSLGR+YACLQ P LMALNFCSAVGIVAANKALFRH EGLGFATSLTGIHFLATA+GVRACRLCD+YKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLV+FKVVLPFKLLVTLVPICGGVALATAN TEV+AEGA WALAGLLAAAGYQILVKSTQDNLQ LLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSA EPPLWL S PANGSGTTA G+FWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQV+G
Sbjct: 1 MKIPPRSAIVNEEVPAHNNGESTSSGAGANDQNSEAVCVRFFPRKGNTSLGRTYACLQTPGLMALNFCSAVGIVAANKALFRHTEGLGFATSLTGIHFLATAVGVRACRLCDIYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVLFKVVLPFKLLVTLVPICGGVALATANDTEVSAEGASWALAGLLAAAGYQILVKSTQDNLQ-----LLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAVEPPLWLHSTPANGSGTTAGXXXXXXXGVFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVLG 329
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A6H5KCQ2_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ2_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 5.990e-139 Identity = 212/228 (92.98%), Postives = 217/228 (95.18%), Query Frame = 1
Query: 1 MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSLGRSYACLQMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQ 684
MKIPPRSAIVNEEVPA N+GESTSPGAGAN++NSE VCA FFPRKGNT LGR+YACLQ P LMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATA GVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQ NDVSFYQLMKILTTPAVVVLQLV+FKVVLPFKLL TLVPICGGVALATAN TEVAAEGAFWALAGLLAAAGYQILVKS QDNLQ
Sbjct: 1 MKIPPRSAIVNEEVPAFNEGESTSPGAGANDKNSEDVCARFFPRKGNTFLGRTYACLQTPGLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATAFGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQSNDVSFYQLMKILTTPAVVVLQLVLFKVVLPFKLLATLVPICGGVALATANDTEVAAEGAFWALAGLLAAAGYQILVKSAQDNLQ 228
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6M3L0_PERCH (TPT domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M3L0_PERCH) HSP 1 Score: 188 bits (478), Expect = 6.500e-54 Identity = 115/272 (42.28%), Postives = 159/272 (58.46%), Query Frame = 1
Query: 187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
MALNF ++ I+ NK + + G +AT+LT +HFL T +G+ C + + KP+ VLP+ +AFC FV FNNLSLQYN V YQLMK++TTP +VV+Q + + LP L+ LVPIC GV LATA EV G F+ +AG+L+ + YQI VK+ QD L+ SS QLL +QAP +A+++++V P DD L+ T++ +V S +AFLVNLS FLVIG+TSP+SY V+G
Sbjct: 22 MALNFVTSTSIIWINKLAYNN--GFTWATTLTVMHFLVTFIGLCLCVMSGQFAYKPISVRSVLPLCVAFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVVIQYICYSTTLPLIQLLALVPICLGVILATATSVEVNPLGIFFGVAGILSTSLYQIWVKTKQDELKCSSQQLLLYQAPLSALMLMLVVPMADDITTLMRFDWYTYAGC--------------------------------LVIASSGMAFLVNLSIFLVIGKTSPISYNVLG 259
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6L489_PEROL (Mitotic spindle checkpoint protein Bub3 n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6L489_PEROL) HSP 1 Score: 191 bits (486), Expect = 6.490e-52 Identity = 119/272 (43.75%), Postives = 159/272 (58.46%), Query Frame = 1
Query: 187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
MALNF SA I+ NK + + G +AT+LT +HFLAT +G+ C + + K L VLP+ ++FC FV FNNLSLQYN V YQLMK++TTP +V +Q + + LPF L+ LVPIC GVALATA EV G + +AG+L+ + YQI VK+ Q+ L+ SS QLL +QAP + +++L V P DD L+ T++ G+V SC +AFLVNLS FLVIG+TSPVSY V+G
Sbjct: 388 MALNFLSATCIIWINKLAYNN--GFTWATTLTVLHFLATFIGLCLCIMAGQFTHKRLPIRSVLPLCVSFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVAIQYLYYSTTLPFNQLLALVPICIGVALATATSVEVNLLGVTFGVAGILSTSLYQIWVKTKQEELKCSSQQLLLYQAPLSMIMLLSVVPAVDDIPTLIDFDWATYAG--------------------------------GLVVASCAMAFLVNLSIFLVIGKTSPVSYNVLG 625
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7J6PIF6_PEROL (UBX domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PIF6_PEROL) HSP 1 Score: 191 bits (486), Expect = 6.990e-52 Identity = 119/272 (43.75%), Postives = 159/272 (58.46%), Query Frame = 1
Query: 187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
MALNF SA I+ NK + + G +AT+LT +HFLAT +G+ C + + K L VLP+ ++FC FV FNNLSLQYN V YQLMK++TTP +V +Q + + LPF L+ LVPIC GVALATA EV G + +AG+L+ + YQI VK+ Q+ L+ SS QLL +QAP + +++L V P DD L+ T++ G+V SC +AFLVNLS FLVIG+TSPVSY V+G
Sbjct: 20 MALNFLSATCIIWINKLAYNN--GFTWATTLTVLHFLATFIGLCLCIMAGQFTHKRLPIRSVLPLCVSFCGFVVFNNLSLQYNTVGTYQLMKVMTTPVIVAIQYLYYSTTLPFNQLLALVPICIGVALATATSVEVNLLGVTFGVAGILSTSLYQIWVKTKQEELKCSSQQLLLYQAPLSMIMLLSVVPAVDDIPTLINFDWATYAG--------------------------------GLVVASCAMAFLVNLSIFLVIGKTSPVSYNVLG 257
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A0S4IKX4_BODSA (Transmembrane protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IKX4_BODSA) HSP 1 Score: 175 bits (444), Expect = 5.340e-49 Identity = 109/277 (39.35%), Postives = 159/277 (57.40%), Query Frame = 1
Query: 172 QMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
++P +ALN CS++GIV +NK +F+ + T LT IHF+ T +G+ CR C ++++K + ++LP+ ++FC FVA NLSL YN V FYQLMK+LTTP +VV+Q + + P + ++L C GVA+AT +E G A++ LL YQI V + Q L+ +S QLL+ QAP +AV+++ + P DD L +E P N TA + +S LLAFLVN+S FLVIG+TSPV+Y V+G
Sbjct: 18 RVPFYLALNACSSIGIVFSNKVVFQ-VYNFKYGTLLTFIHFIFTFVGLEICRQCGMFELKRIDLKKILPLCVSFCGFVALTNLSLVYNSVGFYQLMKVLTTPIIVVIQTLFYNETFPTNIKLSLALTCVGVAIATVTDSEANLIGTLVAISALLVTCMYQIWVGTKQKELECNSYQLLYWQAPISAVILVPIIPLLDDLSTL----------SEWP--------NSDAVTA---------------IIISSLLAFLVNISIFLVIGKTSPVTYNVLG 260
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A0G4EQF8_VITBC (TPT domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EQF8_VITBC) HSP 1 Score: 177 bits (449), Expect = 6.320e-49 Identity = 115/280 (41.07%), Postives = 161/280 (57.50%), Query Frame = 1
Query: 175 MPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFD----DTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
+P MALNF ++V I+ ANK F G F SLT +HF T +G+ ++ K L V+PI+LAFC FV FNNLSLQYN V YQL+K+LTTP ++VLQ ++K VLPF +++LVP+C GVALAT EV G + AG+++ + YQI VK Q++LQ +S QLL++Q+ + V++ + PF + D +++ F+ W+ FW+ S LAFLVNLS FLVIG+TSP+SY V+G
Sbjct: 9 IPFYMALNFTTSVLIIWANKIAFN--AGFNFTVSLTTLHFTFTFVGLEIGSRYGLFDKKALSIISVVPISLAFCGFVVFNNLSLQYNAVGIYQLLKVLTTPTIIVLQHTLYKQVLPFWQIISLVPVCVGVALATVTSIEVNFWGLVFGGAGIISTSLYQIWVKKEQESLQCTSPQLLYYQSAVSGVMLCCLVPFMEPLVTDKDGNPGLLLFDFTP-----WVT---------------------FWI---LTSAALAFLVNLSIFLVIGKTSPISYNVLG 257
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A7S1PXY6_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1PXY6_NEODS) HSP 1 Score: 172 bits (437), Expect = 3.700e-47 Identity = 110/277 (39.71%), Postives = 157/277 (56.68%), Query Frame = 1
Query: 172 QMPSLMALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
++P + LN S++GIV NK +F+ + + T LT IHF+ T +G+ CR C ++ KP+K VLP++L+FC FVA NLSL YN V FYQLMK+LTTP +V +Q V + P + ++L C GV +A+ + E G AL+ LL + YQI V + Q L +S QLL++QAP +A+++L + P FDD L A W + +T A + +S +LAFLVNLS FLVIG+TSPV+Y V+G
Sbjct: 92 RIPFYLFLNASSSIGIVFTNKMVFQMYD-FKYGTLLTFIHFIFTFIGLEICRWCGAFERKPVKIMDVLPLSLSFCGFVALTNLSLVYNTVGFYQLMKVLTTPMIVTIQTVFYGETFPMNIKLSLALTCVGVTIASVSDPEANFIGTLVALSALLVTSMYQIWVGTKQKELGCNSYQLLYYQAPLSALILLPIIPLFDDLSTLKA-------------W-------------PNNETITA-------ILISSVLAFLVNLSIFLVIGKTSPVTYNVLG 334
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: A0A8J2AI62_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2AI62_9DINO) HSP 1 Score: 170 bits (431), Expect = 4.950e-46 Identity = 118/276 (42.75%), Postives = 165/276 (59.78%), Query Frame = 1
Query: 187 MALNFCSAVGIVAANKALFRHAEGLGFATSLTGIHFLATALGVR-ACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEV-AAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAP--FFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
M LNF SAVGI+ NK + H G +A+ LT +HF+A+ +G+ + R +++ K K +V+P+ +F AFV FNNLSLQYN V YQL+K+L TP VVVLQ + +L F V+L+PIC GV+LAT + EV G F+ + G+ + + YQI VKS Q +LQ++ QLLHHQ+ + + M+AP F+ D L + S P+ A+ + F++ V SC LA+LVNLSTFLVIG+TSPVSYQV+G
Sbjct: 108 MMLNFWSAVGIIWVNKWIMNH--GWTWASILTWMHFVASFIGLEISWRTLGLFEPKETKLMKVVPLCASFIAFVVFNNLSLQYNTVGIYQLLKVLMTPVVVVLQFCMHGTLLTFWQTVSLIPICVGVSLATVSSLEVNGLTGVFFGVMGIFSTSLYQIWVKSKQSDLQLNPFQLLHHQS---FLSMWMLAPLAFYVDRSLLFCLQDYAMSTLGDPV------------CADKVIRPLSDPFFLAGVGTSCCLAYLVNLSTFLVIGKTSPVSYQVLG 366
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Match: F2UIL3_SALR5 (Solute carrier family 35 member E3 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UIL3_SALR5) HSP 1 Score: 167 bits (424), Expect = 5.610e-46 Identity = 112/281 (39.86%), Postives = 164/281 (58.36%), Query Frame = 1
Query: 166 CLQMPSL-MALNFCSAVGIVAANKALFRHAEGLGFAT-SLTGIHFLATALGVRACRLCDVYKVKPLKQTQVLPITLAFCAFVAFNNLSLQYNDVSFYQLMKILTTPAVVVLQLVIFKVVLPFKLLVTLVPICGGVALATANHTEVAAEGAFWALAGLLAAAGYQILVKSTQDNLQVSSLQLLHHQAPQAAVLILMVAPFFDDTGELVAMMIRTFSAAEPPLWLRSAPANGSGTTAESGQTAGAGLFWVGMVFLSCLLAFLVNLSTFLVIGRTSPVSYQVMG 1002
CLQ L M LN+ S++ IV NK + + GF + +LT IHFL T G++ C + +++VK L+ VLP++LAFC FV F NLSL YN V FYQL K++TTPA+V++ V +K +L++L+ +C GVA AT ++G F+A G+L + YQI VK+ Q +L+VS+ QLL +QAP +A L+ ++ PF + E ++ + +SA P L V S ++AFLVNLS FLVIG+TSP++Y V+G
Sbjct: 6 CLQPTQLFMLLNYTSSIMIVFLNKMAYTY----GFPSITLTMIHFLMTFAGLKVCSMMGIFQVKRLRIMDVLPLSLAFCGFVVFTNLSLLYNTVGFYQLAKVMTTPAIVLVHWVFYKQSYSKPILLSLLLVCIGVAQATQADVTTNSKGLFFATCGVLVTSIYQIWVKTKQQDLEVSAFQLLFYQAPLSAGLLAVIIPFVEPPFEPYGVLAQEWSA---PALLA--------------------------VLGSSIMAFLVNLSIFLVIGKTSPITYNVLG 253 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15811.4284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15811.4284.1 >prot_Ecto-sp13_S_contig15811.4284.1 ID=prot_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp MKIPPRSAIVNEEVPARNDGESTSPGAGANEQNSEAVCAPFFPRKGNTSLback to top mRNA from alignment at Ecto-sp13_S_contig15811:501..3922+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15811.4284.1 ID=mRNA_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15811:501..3922+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15811:501..3922+ >mRNA_Ecto-sp13_S_contig15811.4284.1 ID=mRNA_Ecto-sp13_S_contig15811.4284.1|Name=mRNA_Ecto-sp13_S_contig15811.4284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1002bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15811:501..3922+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |