mRNA_Ecto-sp13_S_contig15699.4206.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI) HSP 1 Score: 279 bits (714), Expect = 1.420e-93 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFNRKTRNVELKSSKHT DASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF
Sbjct: 99 RFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 243
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA) HSP 1 Score: 246 bits (629), Expect = 8.170e-81 Identity = 120/145 (82.76%), Postives = 137/145 (94.48%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFN KTR+VELK+S+HT DA ALQK ADF+QAF +GFEVQDAVALLRLDDLY+DSF+V+DVK L+GDHLSRAIGRIAGQ GKTRHAIENATRTR++VADQ++HILGSF+NI+VARDAIC LILGAPPGKVYNQM+NVARRM+ERF
Sbjct: 87 RFNPKTRSVELKTSEHTEDAGALQKAADFVQAFCMGFEVQDAVALLRLDDLYIDSFEVKDVKALSGDHLSRAIGRIAGQDGKTRHAIENATRTRVVVADQRIHILGSFANIRVARDAICNLILGAPPGKVYNQMKNVARRMNERF 231
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.190e-79 Identity = 120/145 (82.76%), Postives = 136/145 (93.79%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFN K RNVELK+S+ T D SALQ++ADF+QAFMLGFEVQDAVALLRL+DLY+DSF+V+DVK L GDHLSRAIGR+AGQ GKTRHAIENATRTR+IVAD ++HILGSF+NI+VARDAICALILGAPPGKVYNQMRNVARRM+ERF
Sbjct: 94 RFNPKARNVELKASQFTEDPSALQRSADFVQAFMLGFEVQDAVALLRLEDLYIDSFEVRDVKMLQGDHLSRAIGRVAGQDGKTRHAIENATRTRVIVADHRIHILGSFANIRVARDAICALILGAPPGKVYNQMRNVARRMNERF 238
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK) HSP 1 Score: 239 bits (611), Expect = 4.320e-78 Identity = 117/145 (80.69%), Postives = 136/145 (93.79%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFN KTR+VE+K+S+HT D A+QK ADFIQAFM+GFEVQDAVALLRL+DLYVDSF+V+DVK L+GDHLSRAIGR+AGQ GKTR+AIENATRTRI+VADQ++HILGS++NI+VARDAIC LILGAPPGKVYNQMR VA+RMSERF
Sbjct: 86 RFNPKTRSVEMKTSEHTEDVGAIQKAADFIQAFMMGFEVQDAVALLRLEDLYVDSFEVKDVKALSGDHLSRAIGRVAGQDGKTRYAIENATRTRIVVADQRIHILGSYANIRVARDAICNLILGAPPGKVYNQMRAVAKRMSERF 230
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A8J9S7D6_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S7D6_PHATR) HSP 1 Score: 229 bits (583), Expect = 4.880e-75 Identity = 113/145 (77.93%), Postives = 131/145 (90.34%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFN K+R+VE+K+S HT D ALQK ADF+ AFM+GFEVQDAVALLRLDDL+V+SFQV DVK L GDHLSRAIGRIAGQ GKTR AIENATRTRI+VADQ+VH+LGS++N++VAR+AIC LILGAPPGKVYN MRNVA+RMSER+
Sbjct: 2 RFNTKSRSVEMKTSPHTVDTGALQKGADFVSAFMMGFEVQDAVALLRLDDLFVESFQVTDVKLLRGDHLSRAIGRIAGQDGKTRFAIENATRTRIVVADQRVHLLGSYANLRVARNAICDLILGAPPGKVYNSMRNVAKRMSERY 146
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM) HSP 1 Score: 231 bits (589), Expect = 7.360e-75 Identity = 110/145 (75.86%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
R N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RM+ERF
Sbjct: 78 RMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 222
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A7S3PRC7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRC7_9STRA) HSP 1 Score: 231 bits (590), Expect = 7.420e-75 Identity = 113/145 (77.93%), Postives = 132/145 (91.03%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
RFN KTR VE+K+S++T ALQK+ADF++AF +GFEV DA+ALLRLDDLYVD+F+++DVKTL GDH+SRAIGRIAGQGGKTR AIENATRTRI++ADQK+HILGSF NIK+ARDAIC LILGAPPGKVYNQMRNVA RM+ERF
Sbjct: 89 RFNPKTRMVEMKTSENTEYQGALQKSADFVRAFAMGFEVHDAIALLRLDDLYVDTFEIKDVKTLQGDHMSRAIGRIAGQGGKTRFAIENATRTRIVLADQKIHILGSFQNIKIARDAICKLILGAPPGKVYNQMRNVASRMNERF 233
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: G4Z4N5_PHYSP (KH domain-containing protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=G4Z4N5_PHYSP) HSP 1 Score: 231 bits (589), Expect = 1.160e-74 Identity = 110/145 (75.86%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
R N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+ARDAIC+LI+GAPPGKVYN+MRNVA RM+ERF
Sbjct: 92 RMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A3M6VD79_9STRA (KH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD79_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.650e-74 Identity = 110/145 (75.86%), Postives = 132/145 (91.03%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
R N KTR +ELK+S HT D ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSFSNIK+ARDAIC+LI+GAPPGKVYN+MRNVA RM+ERF
Sbjct: 92 RMNTKTRCIELKNSPHTTDVGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFSNIKLARDAICSLIMGAPPGKVYNKMRNVASRMNERF 236
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Match: A0A6A3YBU7_9STRA (KH domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3YBU7_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.260e-74 Identity = 109/145 (75.17%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 1 RFNRKTRNVELKSSKHTGDASALQKTADFIQAFMLGFEVQDAVALLRLDDLYVDSFQVQDVKTLTGDHLSRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKVARDAICALILGAPPGKVYNQMRNVARRMSERF 435
R N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDAVALLRL+DL++D+F+V DVK L GDHLSRAIGR+AGQ GKT++A+ENATRTRI++ADQK+HILGSF+NIK+ARDA+C+LI+GAPPGKVYN+MRNVA RM+ERF
Sbjct: 91 RMNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDLFIDTFEVNDVKMLKGDHLSRAIGRVAGQDGKTKYAVENATRTRIVLADQKIHILGSFANIKLARDALCSLIMGAPPGKVYNKMRNVASRMNERF 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15699.4206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15699.4206.1 >prot_Ecto-sp13_S_contig15699.4206.1 ID=prot_Ecto-sp13_S_contig15699.4206.1|Name=mRNA_Ecto-sp13_S_contig15699.4206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp MPPPCRKPPILSRRSCSASKCRTRWRCCDWTTFTSTRSKCKTSRRSLEITback to top mRNA from alignment at Ecto-sp13_S_contig15699:2225..4056- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15699.4206.1 ID=mRNA_Ecto-sp13_S_contig15699.4206.1|Name=mRNA_Ecto-sp13_S_contig15699.4206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1832bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15699:2225..4056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15699:2225..4056- >mRNA_Ecto-sp13_S_contig15699.4206.1 ID=mRNA_Ecto-sp13_S_contig15699.4206.1|Name=mRNA_Ecto-sp13_S_contig15699.4206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15699:2225..4056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |