mRNA_Ecto-sp13_S_contig1543.4063.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: D7FLA1_ECTSI (Contains SCP domain which is found in plant PR1 and cysteine-rich proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA1_ECTSI) HSP 1 Score: 312 bits (800), Expect = 5.920e-108 Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1
Query: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVLPPVS 444
MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYD+E PAFSP TRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFF PGNVVDQFEGNVLPPVS
Sbjct: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDYENPAFSPATRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFTPGNVVDQFEGNVLPPVS 148
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: A0A4U8YVD0_OULSP (mRNA n=1 Tax=Oulactis sp. TaxID=2093647 RepID=A0A4U8YVD0_OULSP) HSP 1 Score: 111 bits (278), Expect = 1.040e-27 Identity = 59/152 (38.82%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDG-----GRFGESLAVTDT-NYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVLPP 438
D + L N +R H A DLQWDAT A+A+ +WA + +Q+ G +GE+L + T N C +A+ W E YD+ P F+ T HFTQ VW+ TTHVG G + G + +YVVA++ P GN+ F NVLPP
Sbjct: 79 FDVSECLTANNLNRSSHQATDLQWDATLASASADWA---LTLAQQNSMQHSSGPYGENLYYSSTSNIGTVASCKDAVEAWYSEIAYYDYNNPGFASNTGHFTQVVWKATTHVGVGIAAVTS--GGFTSTYVVARYTPAGNLQGAFAANVLPP 225
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: D8LBB2_ECTSI (Novel protein (Wu:fd05a10) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB2_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.340e-24 Identity = 64/147 (43.54%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQD-GGRFGESLA-VTDTNY-DATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVL 432
+D ++L IN +RR HGA L+W + CA AQ A+ HE +GE+LA TD ++ D T CI +I+ WQ+E YD+ P S T HFT NVWR TTHVGFG A Y +VVA F P GN F NVL
Sbjct: 53 LDESEVLRCINEYRREHGAPMLRWSSACAREAQRRAS-----HESGPSAEYGENLARSTDHSWRDPTIACIGSIHQWQKEEAGYDYGKPGLSSNTSHFTANVWRLTTHVGFGVFRAT--YKGKSTMWVVAYFSPRGNQAGDFARNVL 192
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: UPI000F555376 (ectin-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F555376) HSP 1 Score: 98.2 bits (243), Expect = 6.950e-23 Identity = 56/147 (38.10%), Postives = 77/147 (52.38%), Query Frame = 1
Query: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANR----GYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNV 429
+D+ LD NT R H A L WD A AQ+WAN G + H+ + + GE+L + ++ T C +A+N W E YD P S T HFTQ VW+ TT +G A G+ +V+Y+VA++ PPGN QF NV
Sbjct: 43 VDSSACLDAHNTKRAIHSAPPLTWDDELARKAQHWANHLASIGSLKHDPNA-KAGENLYFSYSSVPQETSCQDAVNAWYAEIKDYDFNNPHSSRKTGHFTQVVWQATTKLGVA--KATTDRGQGYVTYIVARYDPPGNYRGQFAENV 186
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: B4PKT6_DROYA (SCP domain-containing protein n=2 Tax=melanogaster subgroup TaxID=32351 RepID=B4PKT6_DROYA) HSP 1 Score: 97.4 bits (241), Expect = 1.520e-22 Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 19 LDTINTHRRRHGAADLQWDAT----CATAAQNWANRGYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVLPPV 441
L+ N R++HG+A L+ D C A+ A+ G + H GG++GE+L + D EC+ W E YD E F T HFT VW+ T +G G A D G YWV VA+++PPGNVV QF+ NVLPP+
Sbjct: 27 LEEHNRLRKKHGSAPLELDDELTKGCEAYAKVLADSGKLEHSSSGGKYGENLCMRS---DKPLECVQN---WYDEIKDYDFEKGEFGMKTGHFTALVWKNTNKMGMG--QATDSKGYYWV---VARYYPPGNVVGQFKENVLPPI 160
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: UPI000C04E7EB (ectin-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04E7EB) HSP 1 Score: 96.7 bits (239), Expect = 2.750e-22 Identity = 54/147 (36.73%), Postives = 76/147 (51.70%), Query Frame = 1
Query: 1 MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANR----GYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNV 429
+D L+ N R H A+ L WD A+ AQ WAN G + H+ + GE+L V+ ++ + C +A+ W E YD P FS T HFTQ VW+ TT +G A G ++V+Y+VA++ PPGN QF NV
Sbjct: 43 VDESACLEAHNAKRDLHSASPLTWDGNLASKAQAWANHLASIGSMQHDPNADE-GENLFVSYSSEPHWSSCQDAVEEWYAEIKDYDFNDPRFSSKTGHFTQVVWKATTKLGVA--KATAHQGGFYVTYIVARYSPPGNYQGQFAENV 186
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: UPI000444962A (PR-1-like protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444962A) HSP 1 Score: 95.5 bits (236), Expect = 5.100e-22 Identity = 59/148 (39.86%), Postives = 74/148 (50.00%), Query Frame = 1
Query: 4 DTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDG--GRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAV----DQYGKYWVSYVVAKFFPPGNVVDQFEGNV 429
D L NT R HGAADL W+ T ATAAQNWAN G V G G +GE+LA ++ +A+ W E T YD A +P HFTQ VW+ +T +G YG SY V +++P GNV+ QF NV
Sbjct: 34 DIDSYLSAHNTVREAHGAADLVWNDTLATAAQNWAN-GCVFEHSGGSLGPYGENLAAGTGDF----PIASAVGAWAAESTQYD----ASNPQPSHFTQMVWKASTQLGCAEAQCAIFDESVYGP--TSYYVCEYYPAGNVIGQFPQNV 170
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: UPI000440D0C3 (PR-1-like protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440D0C3) HSP 1 Score: 95.5 bits (236), Expect = 5.100e-22 Identity = 58/148 (39.19%), Postives = 72/148 (48.65%), Query Frame = 1
Query: 4 DTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDG--GRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAV----DQYGKYWVSYVVAKFFPPGNVVDQFEGNV 429
D L NT R HGA DL W+ T ATAAQNWAN G V G G +GE+LA +Y + + W E T YD P +S HFTQ VW+ TT +G YG SY V +++P GNV+ +F NV
Sbjct: 34 DIDSYLSAHNTLREAHGAVDLVWNNTLATAAQNWAN-GCVFEHSGGSLGPYGENLAAGTGDY----PIASGVGAWAAEATQYDPNNPQYS----HFTQMVWKATTQLGCAEAQCAIFDESVYGP--TSYYVCEYYPAGNVIGEFPQNV 170
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: W0T597_KLUMD (SCP_PRY1_like n=1 Tax=Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) TaxID=1003335 RepID=W0T597_KLUMD) HSP 1 Score: 93.6 bits (231), Expect = 7.420e-21 Identity = 57/144 (39.58%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 13 KILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQ---DGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVLP 435
+ILD N+ R +H A LQWD+ A+ AQ++AN YV Q +GE+LA+ Y+ T A W E LYD FS T HFTQ VW+ +T +G + GKY+ Y + ++ PPGN+V QF+ NVLP
Sbjct: 80 EILDLHNSLRAKHSAGPLQWDSNLASKAQDYANT-YVCDGQLKHSTLPYGENLAL---GYNTTA----ATMAWYDEYKLYDFSNGQFSTQTGHFTQLVWKNSTKLGCAYLIC----GKYYGQYTICEYDPPGNIVGQFQQNVLP 211
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Match: A0A1G4MKM6_LACFM (LAFE_0H13278g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4MKM6_LACFM) HSP 1 Score: 95.1 bits (235), Expect = 1.160e-20 Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 7 TQKILDTINTHRRRH-GAADLQWDATCATAAQNWANR----GYVIHEQDGGRFGESLAVTDTNYDATTECINAINLWQQEGTLYDHETPAFSPTTRHFTQNVWRRTTHVGFGFGSAVDQYGKYWVSYVVAKFFPPGNVVDQFEGNVL 432
+ IL NT R H +DL W T AT AQN+A+ G ++H GG +GE+LA+ Y AT A++ W E + YD P +S +T HFTQ VW+ +T VG G + G W +YV+ + P GNV+ +F+ NV+
Sbjct: 177 SSSILAEHNTKRALHEDTSDLTWSDTLATYAQNYADNYDCSGNLVHS--GGPYGENLAL---GYSAT----GAVDAWYGEISSYDFSNPGYSSSTGHFTQVVWKSSTQVGCG----IKACGNEWGNYVICSYSPAGNVIGEFDTNVM 310 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1543.4063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1543.4063.1 >prot_Ecto-sp13_S_contig1543.4063.1 ID=prot_Ecto-sp13_S_contig1543.4063.1|Name=mRNA_Ecto-sp13_S_contig1543.4063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp MDTQKILDTINTHRRRHGAADLQWDATCATAAQNWANRGYVIHEQDGGRFback to top mRNA from alignment at Ecto-sp13_S_contig1543:6001..7862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1543.4063.1 ID=mRNA_Ecto-sp13_S_contig1543.4063.1|Name=mRNA_Ecto-sp13_S_contig1543.4063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1862bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1543:6001..7862- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1543:6001..7862- >mRNA_Ecto-sp13_S_contig1543.4063.1 ID=mRNA_Ecto-sp13_S_contig1543.4063.1|Name=mRNA_Ecto-sp13_S_contig1543.4063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1543:6001..7862- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |