mRNA_Ecto-sp13_S_contig153.3981.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: D7FYU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU8_ECTSI) HSP 1 Score: 1216 bits (3145), Expect = 0.000e+0 Identity = 635/774 (82.04%), Postives = 651/774 (84.11%), Query Frame = 3
Query: 129 MMASLRAKSTTDGGSVSDGSRTSAHLQDRDPSDSSLSSRAESLVDSQVSRASSVFSTGLQTVGLKVGTTSKPTGNEDRAPAGMKKKWQQHYAHGKWIQLGKTFCQTACVLFFVTCLLWSQLCYPLALNSKTLFEAIIDGNDQAASGPTYNKWLLGLFSDEEELTGAYSLHNIYMWHITNPSEVLDQGFKPKLAETGPLGYLKRTTKYDVRFSADFSDTVTYRSWTVYDPVEDPSDCTDMFFRMDKARLRQGIMDCNTTSCDCVGDTQQVTVVNPPFLKLMQQYEPSGIISTLSQEVFADIKEGMTEGFVRATKAYILPTVLNDVYSFRKAFLTADSVLRSIFSSISATDGTATAVSTLRSSYDDTSVDCQDFQPSGYSNSCPWGLLSFIRSAATSLGVDGSFSEAEAEHLLGLRSPTNGSIFDSSGGTLKWIAAGRYEGYLSAPSLPHPSEVDLTGESAFNDLVATVCTWQATDGGSAPSSQECQAKVSGILQWLFGVWFTEENKLEGYVIDEWRGASSGTIDVICDAVGSVCPWRVANGTNAAAWNISTAAAVLMIDPAERDSRNDLSHYTVDGQTLWGSAYTYCTADFLTPIECDEGSRYVDAANETLPELLRSAEGSLEWAQYREQVCGIASNIFGSWVRESTWLNHIIVNHINTSVFELTGYELDGDSIEDIGYAQWATGAVSFALLGLQTLGTIAHDGIWRFMEESRHNLGPELSTQVALAGYSNMRNVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYGDSDNW 2450
MMASLRAKSTTDGGSVSDGSRTSAHLQDRDPSDSSLSSRAESLVDSQVSRASSVFSTGLQTVGLKVG TSK TGNEDRAPAGMKKKWQQHYA+GKWIQLGK FC QLCYPLALNSKTLFEAIIDGNDQAASG TYNKWLLGLFSDE PKLAETGPLGY+KRTTKYD RFS+DFSDTVTYRSWTVYDPVEDP DCTDMFFRM ARLRQGI+DCNTTSCDCV DTQQVTVVNPPFLKLMQQYEPSGIISTLSQEVFADIKEGMTEGFVRATKAYILPTVLNDVYSFRKAFLTADSVLRSIFSS+SATDGTATAVSTLRSSYDDTSVDCQ FQPSGYSNSCPWGLLSFI+SAATSLGVDGSFSEAEAEHLLGLRS T+GSIFDSSGG LKWIAAGRYEGYLSAPSLPHPSEVDLTGESAF+DLVATVCTW+AT+GGSAPS QECQ ENKLEGYVIDEWRGASSGTIDVICDAVGSVCPWRVANGTNAAAWNISTAAAVLMIDPAE+DSRNDLSHYTVDGQTLWGSAYTYCTAD TPIECDEGSRY+DAAN TLP+LLR+AEGSLEWAQYREQVCGIASNIFGSWV ESTWLNH+IVNHIN SVFELTGYELDGDSIEDIGY TQVALAGYS M NVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYG+SDNW
Sbjct: 1 MMASLRAKSTTDGGSVSDGSRTSAHLQDRDPSDSSLSSRAESLVDSQVSRASSVFSTGLQTVGLKVGPTSKATGNEDRAPAGMKKKWQQHYAYGKWIQLGKMFC---------------QLCYPLALNSKTLFEAIIDGNDQAASGSTYNKWLLGLFSDE-----------------------------PKLAETGPLGYIKRTTKYDARFSSDFSDTVTYRSWTVYDPVEDPRDCTDMFFRMGNARLRQGIVDCNTTSCDCVDDTQQVTVVNPPFLKLMQQYEPSGIISTLSQEVFADIKEGMTEGFVRATKAYILPTVLNDVYSFRKAFLTADSVLRSIFSSVSATDGTATAVSTLRSSYDDTSVDCQGFQPSGYSNSCPWGLLSFIQSAATSLGVDGSFSEAEAEHLLGLRSQTDGSIFDSSGGMLKWIAAGRYEGYLSAPSLPHPSEVDLTGESAFDDLVATVCTWEATNGGSAPSLQECQ-----------------ENKLEGYVIDEWRGASSGTIDVICDAVGSVCPWRVANGTNAAAWNISTAAAVLMIDPAEQDSRNDLSHYTVDGQTLWGSAYTYCTADPSTPIECDEGSRYLDAANATLPQLLRAAEGSLEWAQYREQVCGIASNIFGSWVGESTWLNHVIVNHINASVFELTGYELDGDSIEDIGY------------------------------------------TQVALAGYSTMGNVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYGESDNW 671
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: A0A6H5KQ90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ90_9PHAE) HSP 1 Score: 854 bits (2206), Expect = 8.050e-297 Identity = 445/600 (74.17%), Postives = 448/600 (74.67%), Query Frame = 3
Query: 2013 QVCGIASNIFGSWVRESTWLNHIIVNHINTSVFELTGYELDGDSIEDIGYAQWATGAVSFALLGLQTLGTIAHDGIWRFMEESRHNLGPELSTQVALAGYSNMRNVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYGDSDNWWEGPSSTSGSFDPGDVLFIQENPYGDFSSAAWEGTALSSEVTGLQSWLDTSFMSSPEQCYVLEGFYERCLAKVADGEEWPTNCNFFQTIISDTVSGIECDATRIYDNAHSYPKKPGNVVAAFMHTLALEEASPRRGVLKKDHLLCDDPENCDYTKGGYFTTQRARDIIFEGYTESLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCTNTGFEVVHDTYGTVLEVNKTGSSRHLWYSAELSLPHDLGSIDNPIFAVYPGGHWDNETFQKTMDCEKRVLQGEAGLWNSCDTTVETGSDDPQRIGRTNLYYGNDSLLAAVGSHSSLEVYGTDGTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAVLQYPTRYLAEDNFTLETDIRLNRYIAQTQDWLDARERVGEDQLTDFNGMPYSVPMGMVSTEV 3812
QVCGIASNIFGSWV ESTWLNHIIVNHIN SVFELTGYELDGDSIEDIGY QWATGAVSFALLGLQTLGTI HDGIWRFMEESRHNLGPELSTQVALAGYSNM N TIEYGKALLDLLAEDSDEADEFRRFIVRQSTT WEGPSSTSGSFDPGDVLFIQENPYGDFSSAAWEGTALSSEVTGLQSWLDTSFMSSPEQCYVLEGFYE CLAKV LKKDHLLCDD +NCDYTKGGYFTTQRARDIIFEGYT+SLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCTNTGFEVVHDTYGT VETGSDDPQRIGRTNLYYGNDSLLAAVG SSLEVYGTDGTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAVLQYPTRYLAEDNFTLETDIRLNRYIAQTQDWLDARERVGEDQLTDFNGMPYSVPMGMVST+V
Sbjct: 3 QVCGIASNIFGSWVGESTWLNHIIVNHINASVFELTGYELDGDSIEDIGYVQWATGAVSFALLGLQTLGTITHDGIWRFMEESRHNLGPELSTQVALAGYSNMGNATIEYGKALLDLLAEDSDEADEFRRFIVRQSTT--------WEGPSSTSGSFDPGDVLFIQENPYGDFSSAAWEGTALSSEVTGLQSWLDTSFMSSPEQCYVLEGFYESCLAKV----------------------------------------------------------------LKKDHLLCDDADNCDYTKGGYFTTQRARDIIFEGYTDSLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCTNTGFEVVHDTYGT----------------------------------------------------------------------VETGSDDPQRIGRTNLYYGNDSLLAAVGLDSSLEVYGTDGTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAVLQYPTRYLAEDNFTLETDIRLNRYIAQTQDWLDARERVGEDQLTDFNGMPYSVPMGMVSTQV 460
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: A0A7S1XWL1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWL1_9STRA) HSP 1 Score: 630 bits (1624), Expect = 1.320e-197 Identity = 415/1365 (30.40%), Postives = 649/1365 (47.55%), Query Frame = 3
Query: 351 NEDRAPAGMKKKWQQHYAHGKWIQLGKTFCQTACVLFFVTCLLWSQLCYPLALNSKTLFEAIIDGNDQAASGPTYNKWLLGLFSDEEELTGAYSLHNIYMWHITNPSEVLDQGFKPKLAETGPLGYLKRTTKYDVRFSADFSDTVTYRSWTVYDPVEDPSDCTDMFFRMDKARLRQGIMDCNTTSCDCVGD-TQQVTVVNPPFLKLMQQYEPSGIISTLSQEVFADIKEGMTEGFVRATKAYILPTVLNDVYSFRKAFLTADSVLRSIFSSISATDGTATAVSTLRSSYDDTSVDCQDFQPSGYSNSCPWGLLSFIRSAATSLGVDGSF--SEAEAEHLLGLRSPTNG--SIFDSSGGTLKWIAAGRYEGYLSAPSLPHPSEVDLTGESAFNDLVATVCTWQATDGGSAPSSQECQAKVSGILQWLFGVWFTEENKLEGYVIDEWRGASSGTIDVICDAVGSVC----PWRVANGTNAAAWNISTAAAVLMIDPAERDSRNDLSHYTVDGQTLWGSAYTYCTADFL---TPIECDEGSRYVDAANETLPELLR-----SAEGSLEWAQ-----YREQVCGIASNIFGSWVRESTWLNHIIVNHINTSVFELTGYELDGDSIEDIGYAQWATGAVSFALLGLQTLGTIAHDGIWRFMEESRHNLGPELSTQVALAGYSNMRNVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYGDSDNWWEGPSSTSGSFDPGDVLFIQENPYGDFSSAAWEGTALSSEVTGLQSWLDTSFMSSPEQCYVLEGFYERCLAKVADGEEWPTNCNFFQTIISDTVSGIECDATRIYDNAHSYPKKPGNVVAAFMHTLALEEASPRRGVLKKDHLLCDDPENCDYTKGGYFTTQRARDIIFEGYTESLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCTNTGFEVVHDTYGTVLEVNKTGSSRHLWYSAELSLPHDLG----SIDNPIFAVYPGGHWDNETFQKTMDCEKRVLQGEAGLWNSCDTTVETGSDDPQRIGRTNLYYGNDSLLAAVGSH---SSLEV----YGTD----GTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAV-----LQYPTRYLAEDNFTLETDIRLNRYIAQTQDWLDARERVGEDQLTDFNGMPYSVPMGMVSTEVLTGYATFVSDPHFLTNDVLDQQAAEQMNYIEPDDTHHQSLVDVEPVTGKVLRRAMRLQLLFRIERSSFSPDLLSSESSFTVCRSPTKDIMVDGAGCFMYVPILWYDDQRVMDEKSAVTLYQEFLMFADFALETAWKGLIASATLAVFGSILWIVFVVLKARHDRRVWVD 4319
NE+ GM+KKW++H+ G+ + + + LWSQL Y + NS+ LFEA+ D DQ TY + L E A ++H+ +++H+ NP+++++ G+KP GP Y K+ +YDV FS D S TVT++ W ++P+ DP C F+MDK + + DC C CV D TV+N F L+++Y P GI + L+Q F+ I+E +T FV + K +LP + DVY++RK + + L ++ + G A + LR DD C Y + CPWG + A T +D + EA+ LL + T G + FD G WIAAG + G L +P + E+A +L A A G A + EC+AKV G+ LF +W N ++ +V+ E+ + T IC S C P + TN A L++ D+ NDLS Y ++G C + T E E Y NE PELL+ SA S +A YR+ C F ++ + W +V +N +V + + Y D+I D+GYAQW TG V++AL G++++ + GIW + E + + Y + +I +L ++A SD A +R ++R STT GD +N+ G + GDV F++ENP G+F+ + T + + S P +C LE Y CL ++ +G + T C+ +QTI+S+ GI+CD +I H P GN+++ M + E + + + L+C D +CDY +GG +T Q+ R+I+F+GY + + ++++N L +L + C+ + +C P+ D DCT+ G + + G + + H W++ E ++ LG ++ NP FA++ GG N TFQK MDC+ + + + +++ C+T V TG D RI + + GN ++ S+LE+ G D G Q P WEGF Y Y LR+ G D LG + + + EHLL+ +M R V L+YP R+ N + E +RLNR++A W + G D +TD GMPY +P+GM T L G +FVS PH N Q ++P++ H++ VDV+PV+G+ R A RLQ R+ER+S P ++SS+ C PT++ G GCFMY PI W DDQ DEK + + D A I A + G ++ + + + +V+VD
Sbjct: 87 NEEDLATGMRKKWERHF-RGRCTVCAQLLILVGLIAIMLIGALWSQLLYTYSFNSRVLFEAVHDWEDQYEHLDTYKELL------HAEWEPASAVHSFHVFHVKNPADIVELGYKPDFVAKGPFAYEKKIYRYDVEFSGDDSHTVTFKQWHYFEPITDPEVCYTTHFKMDKVEYAETMTDCRNGECHCVDDEATNATVLNSKFYSLLEEYHPDGIYAVLTQTAFSIIEELLTGSFVDSVKNALLPLAMQDVYNYRKMYQLPN--LLTMAKDLLEAQGIDAAAALLRDHNDD-EYTCAPVNVL-YQDYCPWGTAVSVLYAGTVRRLDDALYLDAIEADALL---NGTGGFPTFFDVPEGIHLWIAAGFHYGLLDNELNVYPDDA----EAAMEELSA------AFAGLGACTGDECEAKVYGLCLHLFNIW-KFGNYIDDWVVSEYLNPPADT--PICSVDHSTCDYSPPASLIERTN-------HELASLIMSTTNADNSNDLSIYVPANWDMYGDIQKVCKMEAAGDDTSCENMEDETYY--RNEYFPELLKEGHQLSANYSALYAHWTIEDYRDLTCDWIDFFFTTFREDWGWYQDQLVFWLNDNVADAS-YNFTVDTIPDLGYAQWGTGGVTYALYGVRSVRNVKRQGIWIWGSAEYQESFIEFGARASKRAYPH-NMFSIAESMTVLRMMANTSDAAQNYRAHVMRASTTVEGDGENFTNGVGAV------GDVAFVEENPGGNFTYLYTDPY-----FTAVYDAVSVVAQSDPVECEALETMYYDCLNRITEGNTYLTRCDSWQTILSNPAYGIQCDPNQIVGLPHPQPLSRGNILSHLMEDMTYEV------IFRAEQLICLDTGDCDYMRGGLYTNQKVRNILFDGYVDPVVLRIVNTELLAHDLQMVCNHDRTLGTSDFCVPIADNDCTDLGINITVRSTGEHVYTFSRTENPHAWFANEFTVDV-LGDRNVTVRNPAFALHRGGLSKNITFQKKMDCDSQYMHSTSAVFSGCETRVHTGRGDLDRINKYEFFKGNSTMEVTANGRVHISTLELEAAGQGRDAPYFGLQFKPFLWEGFASYPYSYLLRDAGNDNLGEEDITMYYPEHLLRLNMVRHIPTVVEPQPALEYPVRFAFVRNESRELSVRLNRFVASEDAWRGYFDVAGND-MTDLYGMPYQLPIGMAPTRALNGIGSFVSTPHHYGNAEWGGVEYIQFKGLDPEERAHKTFVDVDPVSGRPFRTATRLQHNVRVERNSLFPKMISSQGR---CEVPTREFNALGYGCFMYHPIYWVDDQVAYDEKRLREYTERYKEEPDNAFLVLLVSCIGGAAGVLIGGVINYIQHRRERKFKNKVYVD 1391
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: A0A835YN97_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN97_9STRA) HSP 1 Score: 572 bits (1475), Expect = 2.940e-175 Identity = 428/1487 (28.78%), Postives = 658/1487 (44.25%), Query Frame = 3
Query: 372 GMKKKWQQHYAHGKWIQLGKTFCQTACVLFFVTCLLWSQLCYPLALNSKTLFEAIIDGNDQAASGPTYNKWLLGLFSDEEELTGAY---SLHNIYMWHITNPSEVLDQGFKPKLAETGPLGYLKRTTKYDVRFSADFSDTVTYRSWTVYDPVEDPSDCTDMFFRMDKARLRQGIMDCNTTSCDC---VGDTQQVTVVNPPFLKLMQQYEPS-----------------------GIISTLSQEVFADIKEGMTEGFVRATKAYILPTVLNDVYSFRKAFLTADSVLRSIFSSISATDGT-ATAVSTLRSSYDDTSVDCQDFQPSGYSNS-----CPWGLLSFIRSAATSLGVDGSFSEAEAEHLLGLRSPTNGSIFDS---------SGGTLKWIAAGRYEGYLSAPSLPHPSEVDLTGESAFND------LVATVCTWQ-ATDGGSAPSSQ-----ECQAKVSGILQWLFGVWFTEENKLEGYVIDEWRGASSGTIDVICDAVGSVCPWRVANGTNAAAWNISTAAAVLMIDPA---ERDSRNDLSHYTVDGQTLWGSAYTYCTADFLTPIECDEGSRYVDAANETLPELLRSAEGSLE--WAQYREQVCGIASNIFGSWVRESTWLNHIIVNHINT----SVFELTGYELDGDSIEDIGYAQWATGAVSFALLGLQTLGTIAHDGIWRFMEESRHNLGPELSTQVALAGYSNMRNVTIEYGKALLDLLAEDSDEADEFRRFIVRQSTTYYGDSDNWWEGPSSTSGSFDPGDVLFIQENPYGDFSS----------------------------------AAWEGTALSSEVTGLQSWLDTSFMSSPEQCYVLEGFYERCLAKVADGEEWPTNCNFFQTIIS----DTVSGIECDATRIYDNAHSYPKKPGNVVAAFMHTLALEEASPRRGVLKKDHLLCDDPENCDYTKGGYFTTQRARDIIFEGYTESLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCT---NTGFEVVHDTYGT--VLEVNKTGSSRHLWYSAELSLPHDLGSIDNPIFAVYPGGHWDNETFQKTMDC-EKRVLQGEAGLWNSCDTTVETGSDDPQRIGRTNLYYGNDSLLAAVGSHSSLEVYGTDGTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAVLQYPTRYLAEDNFTLETDIRL----------NRYIAQTQ---------------------------DWLDARERVGEDQLTDFNGMPYSVPMGMVSTEVLTGYATFVSDPHFLTNDVLDQQAAEQMNYIEPDDTHHQSLVDVEPVTGKVLRRAMRLQLL------------------------FRIERSSFSPDLLSSESSFTVCRSPTKDIMVDGAGCFMYVPILWYDDQRVMDEKSAVTLYQEFLMFAD-FALETAWKGLIASATLAVFGSILWIVFVVLKARHDRRVWVD 4319
GM KKWQ+H+ H +W GK +LF C+ W+Q+ YPL LNSK FE ++ DQA+ P Y + L++ E +L +Y+W++TN +V+ G+ P+LA+ GP +++RT +YD+ F+ S TV+Y+ W+ +PV D C DM FRMD A L DC +CDC GD VTVVN PFL+L+ + P G+++ L+QEVF I +T GFV ATKA +LP +L V+ +R+A A +V ++++ I+ G A + + D ++DC + S++ CPWG +++ +AA + + G+ + W+A GR L A +L + + G D LVA +C+W+ A G +AP + EC AKV G+ WLF W+ E E V EW A+ + CD C W + AA +S AA ++DP D+ + LS ++ G LW AY YC+A + E + ++AA TLP +A+ + + A +C A +F +W S W +++ F +T D + +GYAQW G V+ AL GL ++ +A G W + + PE + A AGY +M + + +ALL LA D R ++ ++TTYYG D +G F GD + ++EN D+++ AA G A ++ L + T+ +SS +C L+ +++ C+A + NC+ FQT ++ D + G +C A R+ + H +PK+ G V+A + + + G + + D +CD+ +GG FTT A +++F G + L +KL++ R R ++ C+ P+ + D + + + GF V D G V V+ + + LW++AE+ LP G + +P+FA+ PGG W +E FQK C + R+L G AGLWN D N +++ H+ ++ WEGF Y L Y R G G+ TV VL G+ L F MAR+ A+ R A T T+ +L NRY A DW A RVG L D GMPY+VP GM +T L+G +F SD HF +N ++ + P + H S VDV+PVTG +R A+R QL R+ERS+ P L +++ C +PTK G GCF+Y+P+ W DDQRV+D+ SA L EF ++ +A TA G++LW V + R + V+VD
Sbjct: 60 GMSKKWQRHFRHSQWQLAGKLGVAAGGMLFLSMCVAWTQILYPLVLNSKVAFEVVLSAEDQASGAPAYAAFTRDLYAAEAAXXXXXXXXALTALYLWNVTNARDVVASGYMPRLAQAGPYAFVRRTRRYDIVFAPKTSRTVSYKEWSYLEPVTDARACRDMVFRMDLAALAPNATDCPGAACDCRDPAGDV--VTVVNTPFLRLVHEETPQCLIKGVSLNDVSPNGGVAAPLLQGLLADLAQEVFEGIHTALTGGFVLATKAALLPGMLESVWKYRRAADAARTV-GALYAHIAGDIGADAARKAFIAPGTQDAAIDCGGYSVPPASDAAAAPPCPWGAGAYVAAAAAAAALPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASVPLWLATGRL---LGADALAAVAPWPMRGAREPGDGAQRAALVALLCSWEPAETGAAAPEERSAGWGECGAKVDGVAAWLFATWYRESGSAER-VTTEWLSAADAAT-LACDGASDACGWPIG-----AAAGLSLEAARSIMDPGLATVSDAPSLLSVHSPKGFILWADAYRYCSAPDRSCAEFSPSA--IEAATVTLPANFPAADAAADPSGAARAAAICSTAQYLFRNWAGTSPWAAGAAARYLSAVLPQGTFSVT------DDLTALGYAQWGGGHVTRALYGLPSVTAVARAGAWALVPRRFYGALPEFGARAAAAGYPSMA-LPVATARALLTGLARADDAGRALRAHVITRATTYYGTGDG--DG-------FAAGDAMHVEENTAADYATDDPQHSXXXXXXXXXXXXXXXXXXXXXXXXXQVIAALGGDAAAA-ARHLAALCATT-LSSAAECAALDTYHQHCVASALLPDSVAVNCDAFQTRVANPARDPLRGAQCTAARLEVHYHPWPKQAGGVLADALSSYVWRQVLMDGGYVCAAGVAAAD--DCDHARGGLFTTAPALNVLFRGRADPLVMKLLSTRYRARGVSYACATPAAIARDADTCAMIESGAPCGGDGGFTVRADGGGASPVEVVSVSPAQPALWHAAEVQLPRGGGGVRSPVFALRPGGTWGDEAFQKAQACGDWRMLGGPAGLWNRRDN--------------------NFNIVNTSTCHNFNDL------------WEGFARYALPYGARRSGTRADGSGTVPVLSGDALTVFAMAREDAQALSSAEKRAAALRVPTPTTNAQLTARPEVYAPVNRYYAGPSTNNLLTFRTSRKLIIEKACSSDAIVCSDWAAAGARVGLS-LRDSLGMPYAVPPGMSATAALSGMPSFASDAHFYSNAAAGGVDWSRLQNLSPAQSRHASTVDVDPVTGIAMRHALRTQLSDXXXXXXXXXXXXXXXXXXXXXVSLRVERSALLPALTTNQDR---CPAPTKTAFAGGYGCFLYIPLAWTDDQRVIDDASARRLADEFWLYPTRYAPRTAAXXXXXXXXXXXGGALLWAVCRWRRRRFEAIVYVD 1475
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: A0A7S2D3W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3W4_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.130e-45 Identity = 97/300 (32.33%), Postives = 149/300 (49.67%), Query Frame = 3
Query: 2877 LLC--DDPENCDYTKGGYFTTQRARDIIFEGYTESLTVKLMNKRLSGRNLTIKCSVPSVVLWDMYCHPLFDGDCTNTGFEVVHDTYGTV--------------------------------------------LEVNKTGSSRHLWYSAELSLPHDLGSIDNPIFAVYPGGHWDNETFQKTMDCEKRVLQGEAGLWNSCDTTVETGSDDPQRIGRTNLYYGNDSLLAAVGSHSSLEVYGTDGTQDTPRKWEGFGEYKLVYRLR------------NEGLDYLGNDTVVVLQGEHLLQFHM 3602
L+C DD CD+ KGG +TTQ+ARD++FEGY + +TVK +N L+ +NLTI C +V + C +++ DCT GF V++ TV L+V+++G + WYS EL LP+ LG+I NP+FA+Y G W N++F + +CE R+L G + SC+ T ETG + +G +YGND+L AA G+ +V G+ G + P W+GF +Y+ Y +G GN T+ G+ L++F++
Sbjct: 3 LMCANDDSRTCDFMKGGLYTTQKARDVLFEGYVDPITVKFLNYDLAEKNLTIVCKNQTVRSRNEVCGEVYEPDCTAGGFHVLYTRNDTVWYNDEAVKLGPNGEVFTTVGMTTTSTYVNSTTYERRNETITEIILDVDRSGENLWQWYSPELELPYGLGAIKNPVFAIYQGQLWQNDSFHQQRECEHRILNGPKNKFASCEITEETGRREILNVGNVVKWYGNDTLEAAHGAEK-WKVKGSRGEKYQPYLWDGFYKYETPYLFGFNRVAGSGEYDVTKGTRRKGNQTITSFHGDQLMKFNL 301
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Match: V3ZEA5_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZEA5_LOTGI) HSP 1 Score: 64.7 bits (156), Expect = 9.430e-7 Identity = 74/299 (24.75%), Postives = 122/299 (40.80%), Query Frame = 3
Query: 3270 FQKTMDCEKRVLQGEAGLWNSCDTTVETGSDDPQRIGRTNLYYGNDSLLAAVGSHSSLEVYGTDGTQDTPRKWEGFGEYKLVYRLRNEGLDYLGNDTVVVLQGEHLLQFHMARDSTDAVLQYPTRYLAEDNFTLETDIRLNRYIAQTQDWLDARER-VGEDQLTDFNGMPYSVPMGMVSTEVLTGYATFV-SDPHFLTNDVLDQQAAEQMNYIEPDDTHHQSLVDVEPVTGKVLRRAMRLQLLFRIERSSFSPDLLSSESSFTVCRSPTKDIMVDGAGCFMYVPILWYDDQRVMDEKSA 4160
F T+D E + +G+ G + TV TG DD R G N + G SL +++ + G+DGT P + G+D + V + + R S D + +Y +TL+ I L RY+A + ++ + T+ G +P G+V A V S PHFL D + + P+ HQ+++D+EP+TG + A +LQ+ I S+ + +S M++PILW ++ V+D+KSA
Sbjct: 196 FNITLDDEFGLFKGQNGSDDGL-YTVFTGKDDATRHGTINRWNGMSSLPYWTSDTAAM-INGSDGTMYAPFQ--------------------TGDDPIYVFSSD------VCR-SLDLLYRY--------EYTLK-GIDLYRYVAPPSLFENSTANPANKGFCTEAEGC---LPSGVVDVSACRQSAPIVLSQPHFLA---ADPSIINSVYGLHPNTEEHQTIIDLEPITGTTMNAAKKLQINIHITNVSYLTQTSNLKS--------------------MFLPILWLNESAVIDDKSA 430 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig153.3981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig153.3981.1 >prot_Ecto-sp13_S_contig153.3981.1 ID=prot_Ecto-sp13_S_contig153.3981.1|Name=mRNA_Ecto-sp13_S_contig153.3981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1412bp MDTRFPAGSRGTASMMASLRAKSTTDGGSVSDGSRTSAHLQDRDPSDSSLback to top mRNA from alignment at Ecto-sp13_S_contig153:5436..18358- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig153.3981.1 ID=mRNA_Ecto-sp13_S_contig153.3981.1|Name=mRNA_Ecto-sp13_S_contig153.3981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12923bp|location=Sequence derived from alignment at Ecto-sp13_S_contig153:5436..18358- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig153:5436..18358- >mRNA_Ecto-sp13_S_contig153.3981.1 ID=mRNA_Ecto-sp13_S_contig153.3981.1|Name=mRNA_Ecto-sp13_S_contig153.3981.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4236bp|location=Sequence derived from alignment at Ecto-sp13_S_contig153:5436..18358- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |