mRNA_Ecto-sp13_S_contig1528.3967.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1528.3967.1
Unique NamemRNA_Ecto-sp13_S_contig1528.3967.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: D8LEE1_ECTSI (NADH:ubiquinone oxidoreductase complex I n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE1_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 2.950e-222
Identity = 329/347 (94.81%), Postives = 334/347 (96.25%), Query Frame = 1
Query:    1 MIVKPCIAVSAAVGLTSSALVGALHASGPGGLPRGARGTATRGGQGMEATGSGFDLGGWLKQAFTPQTAAAVKKKAGTSAAKEKKAPSGRGCTDAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            MIVKPCIAVSAAVGLTSSALVGALHASGPGGLPRGARGTATRGGQGMEATGSGFDLG W KQAFTPQTAAAVKKKAGTS AK+ KAPSGRGCTDAVLVLGGTGKTG+KVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQ+G    VDVRDEATLKNKALF+GVTQVVSALGPRFGEEGSSSEAVDFQGVQS IEAAEAFLEQGDGS   PGD ERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEW+EV
Sbjct:    1 MIVKPCIAVSAAVGLTSSALVGALHASGPGGLPRGARGTATRGGQGMEATGSGFDLGDWFKQAFTPQTAAAVKKKAGTSTAKKAKAPSGRGCTDAVLVLGGTGKTGQKVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQSG----VDVRDEATLKNKALFDGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEQGDGSSAAPGDQERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWIEV 343          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A836CBF4_9STRA (NADH:ubiquinone oxidoreductase complex I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 6.560e-51
Identity = 121/254 (47.64%), Postives = 149/254 (58.66%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAE-LYDAS-TPGLFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWV 1035
            DAVLV+G +G+ GR+VV+ LL   R VV A R++    E L DA+   GL+V+     G+DV  E     +  FEGVTQVVS LGP F +   ++EAVD++G  +V+ A E     G  S          L    D  S    P   W PLDDVIMGG+SSSAW    G         + F RW+G LVT+GGGFCGTV+K + FD  GYDGIR+ VRGDGSR+KFRLKP   +    E QYQA FDTV G WV
Sbjct:   64 DAVLVIGASGRAGREVVKELLASGRSVVAAGRTQSKITEALGDAAGARGLWVK----EGLDVTAEEI--PETFFEGVTQVVSCLGPSFSDPALNAEAVDYRGNAAVLRACE---RAGLASTAAAAAASAPLC---DFASGASLP--EWAPLDDVIMGGKSSSAWDAAAGD--------RDFARWSGELVTDGGGFCGTVVKKLNFDTAGYDGIRLVVRGDGSRFKFRLKP-ADMAQANEYQYQASFDTVDGAWV 294          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A383VFN0_TETOB (Uncharacterized protein n=3 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VFN0_TETOB)

HSP 1 Score: 158 bits (399), Expect = 1.250e-39
Identity = 114/280 (40.71%), Postives = 151/280 (53.93%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDAS---------------TPGLFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDG-ERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTV-KGEWVEV 1041
            +AVLV G +GK GRKVVE L++  R V+ A RS + AAE+++A+               + G+ + A    GVDV + ATL  + LFEGVTQVVSALGP  G          +G S E V+ QG+ +++    A L +    +   G G     + P  S  D      AW+ LDDVIMGG SSSA         LE  +  +   W G LV EGGGFCG   K +  D +GYDG+++RV+GDG  +KF +K D   D T E  YQA FDT  +G+W  V
Sbjct:  106 NAVLVFGASGKLGRKVVERLVRSGRTVIAAVRSADKAAEVFEAAGLKEGYQQPSGNGSGSGGILITAA---GVDVTNPATLSAE-LFEGVTQVVSALGPVAGRLPDGSFGYIDGMSPERVETQGMANIV----AALAKHAPGIASAGSGISSSSILPMASAEDLA----AWERLDDVIMGGNSSSA---------LEAAADGSGAVWKGDLVVEGGGFCGARTKALDMDLSGYDGLQLRVKGDGQIFKFNIKTDQ--DATPESTYQATFDTSPEGDWTTV 362          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A7S3QMA4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QMA4_DUNTE)

HSP 1 Score: 151 bits (381), Expect = 2.800e-37
Identity = 104/276 (37.68%), Postives = 146/276 (52.90%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDASTPGLF--VQAGKPN------GVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSVIEAAEAFLEQGDG----SLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKD-MPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            +AVLV+G  G+TGR+ V+ LL+  R VV A R+ + AA      + G+   VQAG         GVDV    TL+   L++GVTQVV+ LG +FG++         G + EAV+  GVQ+++ A    + +  G    +++    GE+V +               W  +DDVIMGG+SSS W+            G    RW G L+ EGGGFCG   K  M  D + YDGI +RV+GDG  +K  +K   ++D T E  YQA FDTV G+W +V
Sbjct:  113 NAVLVIGAAGRTGRQAVQQLLQSGRTVVAALRTADKAAAAEAMGSMGIQEGVQAGGKGILFYETGVDVTKPETLRRPELWKGVTQVVTCLGGKFGKQPDGSMGYIDGCTPEAVEALGVQNLVAAMSEQVPKQTGVQYQAMMPEAAGEQVAM---------------WDRMDDVIMGGQSSSLWEPAP-------DEGPHVARWKGDLIVEGGGFCGARTKPLMQTDWSAYDGIALRVKGDGQIFKLNIKTLEQVD-TPESTYQATFDTVDGQWHDV 365          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A7S1SQV2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQV2_9CHLO)

HSP 1 Score: 147 bits (371), Expect = 8.050e-36
Identity = 105/279 (37.63%), Postives = 147/279 (52.69%), Query Frame = 1
Query:  256 APSGRGCTDAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQAGKPN--------GVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            A +G+   DAVLV+G  GK G +V  ALL   R VV A R  + +A     +  GL   A            GVD+    TL ++ LF GV QVV+A+GPRFG++         GSS   VD +GV +++ AA+A L       +G       +++       +R     W+PL+DVIMGG+SSS  +    G     + G     W+GT++ EGGGFCG   +        +DGIR+RV+G G R+K  LK + ++D   E  YQA F+TV+GEWVEV
Sbjct:  132 AAAGKEKRDAVLVVGSAGKLGAEVTAALLAAGRCVVAAGRQSDESALEAALAEAGLKAGAASVGDGYLHLAPGVDISRPETL-SRELFRGVAQVVAAVGPRFGKQADGSMGFGAGSSPAEVDAEGVAALVAAAQAHLPS-----VGTRRSAAEVLSLATEEDVQR-----WRPLNDVIMGGQSSSGMELLTNG-----EDGSAV--WSGTVIVEGGGFCGLRTEPADLKLDDFDGIRLRVKGGGQRFKLNLKTEEQMD-VPESTYQACFNTVEGEWVEV 391          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A0D2N0U4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0U4_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 1.020e-34
Identity = 112/276 (40.58%), Postives = 145/276 (52.54%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDA-------STPG-----LFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVK-GEWVEV 1041
            +AVLVLG TG+ GR +V+ LL+  R VV A R+ + A+E++ A          G     LFVQAG    VDV DE+TL    LF GVTQVVSALG   G          +G + EAV+ +G+ +V+ A +  L         P       V P  +  D      AW+ LDDVIMGG SSS          LE  SG     W G LV EGGGFCG   + +  D + +DG+R+RV+GDG  +KF +K   + D T E  YQA FDT + G+W  V
Sbjct:   27 NAVLVLGATGRAGRLIVQELLRSGRTVVAAVRTADKASEVFSALELQEGRQAEGKGDGILFVQAG----VDVTDESTL-TPDLFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAMKQHLA--------PQIRTTQEVLPMRTAEDLE----AWERLDDVIMGGSSSSGLT------ALEDGSGAA---WKGDLVVEGGGFCGARTRKLGLDLSQFDGLRMRVKGDGQTFKFNIKTADQED-TPESTYQATFDTSEEGDWTTV 275          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A2V0P7E0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7E0_9CHLO)

HSP 1 Score: 144 bits (363), Expect = 1.030e-34
Identity = 105/271 (38.75%), Postives = 139/271 (51.29%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELY----------DASTPGLFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVK-GEW 1032
            DAVLVLG TG+ GR +V+ LL+  R VV A RS + A E++          + S   LFV AG    VDV  E TL  + LF GVTQVVSALG   G          +G + EAV+ +G+ +V+ A   F+         P      +V    +  D      AW+ LDDVIMGG SSS       GG  E         W G L+ EGGGFCG   + +  D +G+DG+++RV+ DG  +K  +K   + D T E  YQA FDT + G+W
Sbjct:  117 DAVLVLGATGRAGRAIVQQLLRDGRTVVAAVRSADKATEVFSSLGVAEGRQEGSGGILFVDAG----VDVTKEETLTEE-LFRGVTQVVSALGGVAGRLPDGGFGYLDGMTPEAVEAKGIANVVAAMARFMA--------PAKRASEVVLSMRTAEDLE----AWERLDDVIMGGSSSSGLGPAADGGGAE---------WKGDLIVEGGGFCGARTRKLGLDLSGFDGLQLRVKSDGQTFKLNVKTADQED-TPESTYQATFDTAEDGDW 360          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A5J4Y258_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y258_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 5.090e-34
Identity = 101/273 (37.00%), Postives = 144/273 (52.75%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDAST---PG-LFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSVIEAAEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQK-----GVGGGVLERQSGKTFGR-WAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            DAVLV G +G+ G++VV  L+   R VV  S   +   + +   T   PG L+ +    N VD+ D A L +K L++G++QVV+ +GP FG +           +SE VD +G+ ++ +AAE FL         P + E+VL     S +D       W+ LDD IMGG+S S  Q      G  G   ++Q     G  W G  +T+GGGFCG   K +  +   +DGI +RV+GDG  YKF LK   ++ N  E  YQA +DT+ GEWV V
Sbjct:  124 DAVLVFGASGRLGKQVVAELVGAGRHVVATSHKADKLEQAFAGETAEGPGHLYFE----NCVDITDSAALMSKELWQGISQVVTTVGPAFGRQPDGGMGYIDNMTSERVDAEGISNIAKAAEHFLPA---QRFQP-EVEQVLSMR--SAADLE----VWEKLDDTIMGGKSGSYLQTAEDLHGFQGDYKDKQPYDFEGSVWRGETITDGGGFCGARTKMLDLNLQRFDGISLRVKGDGQTYKFNLKTADQM-NVPESTYQAQYDTIDGEWVTV 381          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A7S0RVS8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RVS8_9CHLO)

HSP 1 Score: 141 bits (355), Expect = 1.180e-33
Identity = 101/279 (36.20%), Postives = 143/279 (51.25%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESA------AELYDASTPG----LFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGE---------EGSSSEAVDFQGVQSVIEAAEAFLEQGDG----SLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMP--FDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            +AVLVLG +G+ GR+VVE L+K  R VV A+RS ++A      A L + + PG    LF +A     VD     +LK   L++GVTQVV  +G + G          +G + E V+  G+ +++      L +       +L+  G  + V V               W+ +DDVIMGG SSS  +       L  + G    RW G L+ EGGGFCG   K M    D +GYDG+ +RV+GDG  +K  +K   +LD+  E  YQA FDTV G+W +V
Sbjct:  128 NAVLVLGASGRVGRRVVERLIKMGRTVVAATRSTDTAKAALGEAGLVEGAQPGGKGILFYEAADVTSVD-----SLKRAGLWKGVTQVVLCVGGKAGPLPGGGFGYIDGLTPEVVEAGGIANLVSVLPEVLPKQASLQYTTLVPMGTTDEVAV---------------WERMDDVIMGGNSSSVIE-------LAPELGAGITRWRGELIVEGGGFCGARTKAMADGADLSGYDGVALRVKGDGQIFKINIKTTDQLDSP-ESVYQATFDTVPGQWTDV 378          
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Match: A0A7R9YYX1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YYX1_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 2.020e-32
Identity = 103/275 (37.45%), Postives = 142/275 (51.64%), Query Frame = 1
Query:  280 DAVLVLGGTGKTGRKVVEALLKQKRDVVVASRSKESAAELYD--ASTPG--------LFVQAGKPNGVDVRDEATLKNKALFEGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSVIEAAEAFLEQGDGSL--IGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV 1041
            +AV+VLG TG+ GR+VV ALL+  R VV A RS+E A ++Y+     PG        LF+ AG    VDV  + TL    L+ GVTQVVS LG  FG +         G S E V+  G  ++       L++    +  + P   E  L                W+ +DDVIMGG SSS+++    GGV     G T   W G L+ +GGGFCG     +  + +G DG+ +RVRG+GS +K  +K   +LD+  E  YQA FDTV G+W  +
Sbjct:  100 NAVMVLGATGRVGRRVVRALLQSGRTVVAAVRSEEKALKVYEEVGVQPGKQKDGKGILFINAG----VDVTRQETLDRADLWSGVTQVVSLLGSVFGPQPDGSMGFIDGMSPERVEAGGSAALAAVLPKHLKKAQMVVKDVLPMVTEEDLAK--------------WERMDDVIMGGISSSSFELLEDGGV----KGAT---WKGDLIMDGGGFCGCRTVRIDTNLSGTDGLALRVRGNGSTFKLNIKTQEQLDSP-ESTYQATFDTVAGQWTNI 348          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1528.3967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE1_ECTSI2.950e-22294.81NADH:ubiquinone oxidoreductase complex I n=2 Tax=E... [more]
A0A836CBF4_9STRA6.560e-5147.64NADH:ubiquinone oxidoreductase complex I n=1 Tax=T... [more]
A0A383VFN0_TETOB1.250e-3940.71Uncharacterized protein n=3 Tax=Tetradesmus obliqu... [more]
A0A7S3QMA4_DUNTE2.800e-3737.68Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S1SQV2_9CHLO8.050e-3637.63Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A0D2N0U4_9CHLO1.020e-3440.58Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A2V0P7E0_9CHLO1.030e-3438.75Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A5J4Y258_9CHLO5.090e-3437.00Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A7S0RVS8_9CHLO1.180e-3336.20Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7R9YYX1_9CHLO2.020e-3237.45Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1528contigEcto-sp13_S_contig1528:343..4804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score634.0
Seed ortholog evalue4e-179
Seed eggNOG ortholog2880.D8LEE1
Model size1041
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
Cds size1041
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1528.3967.1prot_Ecto-sp13_S_contig1528.3967.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1528 343..4804 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462812.3995407-CDS-Ecto-sp13_S_contig1528:342..5071681462812.3995407-CDS-Ecto-sp13_S_contig1528:342..507Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 343..507 -
1681462812.4124172-CDS-Ecto-sp13_S_contig1528:961..11281681462812.4124172-CDS-Ecto-sp13_S_contig1528:961..1128Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 962..1128 -
1681462812.4260678-CDS-Ecto-sp13_S_contig1528:1715..19141681462812.4260678-CDS-Ecto-sp13_S_contig1528:1715..1914Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 1716..1914 -
1681462812.4422705-CDS-Ecto-sp13_S_contig1528:2762..28261681462812.4422705-CDS-Ecto-sp13_S_contig1528:2762..2826Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 2763..2826 -
1681462812.4539595-CDS-Ecto-sp13_S_contig1528:3442..36581681462812.4539595-CDS-Ecto-sp13_S_contig1528:3442..3658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 3443..3658 -
1681462812.461869-CDS-Ecto-sp13_S_contig1528:4574..48041681462812.461869-CDS-Ecto-sp13_S_contig1528:4574..4804Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1528 4575..4804 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1528.3967.1

>prot_Ecto-sp13_S_contig1528.3967.1 ID=prot_Ecto-sp13_S_contig1528.3967.1|Name=mRNA_Ecto-sp13_S_contig1528.3967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
MIVKPCIAVSAAVGLTSSALVGALHASGPGGLPRGARGTATRGGQGMEAT
GSGFDLGGWLKQAFTPQTAAAVKKKAGTSAAKEKKAPSGRGCTDAVLVLG
GTGKTGRKVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQAGKPNG
VDVRDEATLKNKALFEGVTQVVSALGPRFGEEGSSSEAVDFQGVQSVIEA
AEAFLEQGDGSLIGPGDGERVLVAPGDSGSDERGPGGAWQPLDDVIMGGR
SSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATG
YDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWVEV
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mRNA from alignment at Ecto-sp13_S_contig1528:343..4804-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1528.3967.1 ID=mRNA_Ecto-sp13_S_contig1528.3967.1|Name=mRNA_Ecto-sp13_S_contig1528.3967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:343..4804- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCGTCAAGCCGTGCATTGCCGTGAGTGCCGCAGTCGGCTTGACTTC GAGCGCTCTCGTGGGCGCGTTGCACGCCAGCGGCCCGGGAGGGCTGCCAC GAGGGGCTCGCGGGACCGCGACTAGGGGTGGCCAGGGCATGGAGGCGACC GGGAGTGGGTTTGACCTTGGCGGCTGGTTGAAGCAAGCGTTCACGCCTCA AACTGCGGCGGCTGTGAAGAAGAAGGCTGGGTGAGACGAGTGCTGCTATT TTGGGTTCGTGTGTTGTCGGTGGGGATTGAACGCATGATGCTGCTGGTGA CGGGTGCGCACGCGAAAAATCTGTGTTTCGTCGTTTCTACTGAAAAAGAT CATGAACGTCAGCAGCGGCAGCACTCCTTCGCCACCAGCCCGGCCATCCG CAGACACACAGAGGGAGCAGGCAATGGTAGCAAGCTCAGAGATGCATGAT AGGAACAGTCAAGCAGTGACGTACTTTGACTCTGCTGCTGTCGTATTACG TAGCGAACAAAAGGGTCGTAACTTCTCCACACAAGCTGCCTATGTATTTT GATCCCGTCTCGTCGCAGATGTACTCTGTGCTTCGGATTACGTTTCCGTC AGCACAACCCCTGGACCGATTTTCAAAGCTCGATTATTCAACGACGAAGA GGATGTATAAACGAAGCCATACGTTTTCGGAGAGCTCTCGAACAGACGGC TTCAACGCCGCCGTTTTCGGCACCCTCGGTCTTCCTGCTGTTGATAAGTC GAGCTTTGAAAATCGGTCCAAGGGGTGTGCTTTCTTGCGTCGTACACGGT AGGTGGTACTACATTACCGTGCTTTCTCTATCACACCCTACGCCAAAGCG GGAGCCAGGATCCTCTCGCCACTTTGAGCACGTTCGAGGCAAGACGAACG TTCGGGAACAGGAAAAGTGTCCATCCCATATGGTGTCTTGTGTGCAAACT CCTTCAGTGACCATCCGCATCTATCAGGAAAACACAGTACAAGCACAGGA AGACTACATAGGCATTCGAGGTACAACCACAGCAGTCGAATCTATGTGCA GGCAGCAACATCATGTTTTCACCCGGTCTGTTCGCTCCGACGCTTACCAT CTCTTGCAATAACCATCGCTTCGTATGCGTAACAACATGTACATAGCACG TCCGCGGCGAAGGAGAAGAAGGCGCCGAGCGGGCGAGGCTGCACGGACGC CGTGCTGGTGCTGGGCGGCACGGGCAAGACCGGGCGGAAAGTGGTGGAAG CCCTCCTGAAACAGAAGCGGGACGTGGTTGTTGCCTCGAGAAGCAAGGAG TCCGCGGCGGAGCTTTATGACGCGTCCACCCCGGGGCTCTTTGTGCAGGC AGGCAAACCGAAGTCGTTTGGGTGATGAGTGTTGTGCTCCCAGGAGTTTT TAGAAAGTCAAGGCAATCTCACAGAAAGACTACCCGTTCGAGATATACCC ACAGCTACAGTTGAACGGGATGTGCTGAAGTTTTCCCAGGAGCTTATTTC CACTTTTCACTAGGATACGGTAGAGGAGTGACGCGCACGCTTGCAAGGCG CCTGAGAGGACGGGTCGTGCACCGCGCGTAGTTTTGGAGGAGCGCCATTT GCGGTAGGTCTTGCCACCGTGTGGGCTCTGTGGCGTGGGCCTGGCATCAA GAAGCGGGGGATCTACGAAAGTTGCCTGGATCTACGACGAATAGTATCAT GCGCCCGTGTGCGTACCCGCGTCGGACACGGGATTGTTGGTTCTTGCACG CATACGACTGTCGTATCGCTTCTTTGGTTACGCGTTGGCAAGACGTGTCT CTCTCCAAGTTTTGTTCTGCGGTGCCCCCTCGTCCGTCTCTCCTTCTCTC TTGTGCCCTTCCCCATGATTTCTTCCGGGCTTCCATCTCCGTAAATGCAC CTTTTTTTTCTGCTCCTCTTGTTTCGAACTACAATTCCCGTTCCTTTTTC TCGATCGTTTTCCAATCATCTTTCAGAGCGGCGTCGACGTGAGGGACGAG GCGACTCTGAAGAACAAGGCCTTGTTTGAGGGGGTGACGCAAGTGGGTAA CAGGAGAAGCTATCGTGTGTGGATTGAGTGGTTGCTGCAGATTCCTGAGT GTAAGGATGAGATGGTCTAGACCTCTGCCTTCGGGGTGGCACGTTCCGTG GCGCTGTTGCATCCATCGTCTGAGTGGAGGGTTGACGGTGGTTACACTGT TGAGGCAGCTAGGAAAGTCGAAAGCAAATTCTGCTGGCCTACGGTGGAAA CCCTATCTCGAACCATAGTTCCTTCTTGCGTCATCGTTGTATGCGCACCG CACGAGGCAATGTTGATTTTTTCGTCTGTTGTACTATGGCAGTAAGGGGG TACCGTATACCGCACCAAGAACAGCGTTGAAAACGGGCATGGATTTTGGT CGATTCGATTCATCACCTGAGCCCGATGTGATGATGCGCACCACGGTAGT GCTCTTTCTCTCAGCGCTGATGTTATCACCAAGGGTCCTGCAACGAAAGT CGAGCTGTACGAAGAATGGCTGTCGCGTGCCGCAAGATGATAACTCCGTC CTGTTTTTTACGTATCCCTGTGTATGTGATTGCGTAAATGTGCGCTGTGA CGTTGCAACTTGGGCGCCATCGATGGTCACGACCTCCGCAGCCGCCCTCG CAAACGAGACGCTTGTCTCCAATACCCTTCCATTTCCACGAAGCCACCAA AGTGGCGGCCACCCACCCCCCCGACTTATACGACCCGAATCGTACGGTAT CCCCGGTTTATTCCATCTGTGGCCTCCTCCTCACAACCATTGTCTTGACC CCGAATCAGTACGGACAGTGCTGGGTAGAGATATCGGAACGGTCTTAAAT ATGAAGACAGCAACAACAACAACAACAAACTCACTGACAGGTCGTGTCAG CCCTCGGACCGCGATTCGGCGAGGAGGGCAGCTCCTCGGAGGCCGTTGAC TTCCAGGGCGTGCAGTCCGTCATCGAGGCAGCAGAGGCGTTTCTCGAGCA AGGGGATGGCTCCTTAATAGGCCCGGGTGACGGGGAGCGAGTCCTGGTTG CTCCGGGAGACAGCGGCAGCGACGAGCGGGGTCCAGGAGGTGGGAGTTTT GAGTTGCTGCAGAAGCCGATGGGAGCCCCCTTTATATTTTCTAGGATGAA CCCTCCTGTTCTTGTATTGGTGTGGGTTCTGAGGATACGTTATGGGTGTT GTGTCTTCGAAATCTACCAATGTTCGGCCGAGGATAGAAATGGGCCGTCT ACCAACTTATTCGGATCGTATATAGATTCAGCCTTCCTGATCGTTTGTAT GTGTTTGGGTTCTGAGGGACGGTTCTGCGTGTTGTGTCTCCGAAATCTCT CATGTGCGGTCGTAGTACCCGAGGATAGAAAATGAGCCCTCTATTTTCAT AACGATCGTCAGCAGTGTCTGAATGGCGCACCGCTTGGAAAAAGTTCATT TAAAGAGACGAAAATATTTAGCACCACACACATACGTACACTCTCACCTT TTTTACCCTTGTCTGGTGTTTCCTTTTTTTTTTTCTTGTGGCTTTTTCTC TTGCTATCCGAGGCGTGCTGATGACGAGCCAGTCTTGAAACGTACAATAC AGCAGTACCCCCCGCCTCGGCCAAAAAATCTTTCGTCAATCGTTTCCATT CGTTTGCTCGCTCGCTCGATCCCTAGGTGCGTGGCAGCCTCTGGACGATG TCATCATGGGAGGAAGGAGTTCCAGCGCCTGGCAGAAGGGGGTGGGAGGG GGTGTGCTGGAGCGGCAGTCTGGGAAGACGTTCGGTCGCTGGGCGGGGAC CCTGGTAACGGAAGGGGGTGGCTTCTGCGGCACCGTAATCAAGGTGAGGT GTTGCGTTGGTGGTGGTGGTACACGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGCTGTTGTTGGGCGTTTTGTTGGGAGATGTTGTT TCTCCCCGTTGTTGAAAGCTCGTTTGGCGCCGTGCTAGACGGGTGTTTGA TTTTTGTTTGTTCGTTTTGTTTCGCTTGGACTTTGAGCAGCAGGTTAGCC GTCAACTCGGCCAAAAAGTAGAATCCAATCGTCAAGCCGATCGAACCATT CCACTATCGAGCTAAAGGAAGGCAAAGCGATCGCCTACGTTGACCGTGGT CCCCCCGAACCGACATACACTGGAGCAAACCCAGTGATATACCTGGTAAC CTCAGCCCGATCCAATCATATGCTAAGCCCACACGGAAACGGAACTAATC CCAAACCCCAAACCACGAACCAACCCCGGCATTCCTTGGCGGGGTAGGAC ATGCCCTTCGACGCCACAGGTTATGATGGCATTCGGATCCGGGTGCGCGG GGACGGCAGCCGTTACAAGTTCCGCCTCAAGCCAGACACGAAGCTGGACA ACACTGCCGAGCGGCAATATCAGGCGCCGTTCGATACGGTCAAGGGAGAG TGGGTCGAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1528:343..4804-

>mRNA_Ecto-sp13_S_contig1528.3967.1 ID=mRNA_Ecto-sp13_S_contig1528.3967.1|Name=mRNA_Ecto-sp13_S_contig1528.3967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1041bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:343..4804- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCGTCAAGCCGTGCATTGCCGTGAGTGCCGCAGTCGGCTTGACTTC
GAGCGCTCTCGTGGGCGCGTTGCACGCCAGCGGCCCGGGAGGGCTGCCAC
GAGGGGCTCGCGGGACCGCGACTAGGGGTGGCCAGGGCATGGAGGCGACC
GGGAGTGGGTTTGACCTTGGCGGCTGGTTGAAGCAAGCGTTCACGCCTCA
AACTGCGGCGGCTGTGAAGAAGAAGGCTGGCACGTCCGCGGCGAAGGAGA
AGAAGGCGCCGAGCGGGCGAGGCTGCACGGACGCCGTGCTGGTGCTGGGC
GGCACGGGCAAGACCGGGCGGAAAGTGGTGGAAGCCCTCCTGAAACAGAA
GCGGGACGTGGTTGTTGCCTCGAGAAGCAAGGAGTCCGCGGCGGAGCTTT
ATGACGCGTCCACCCCGGGGCTCTTTGTGCAGGCAGGCAAACCGAACGGC
GTCGACGTGAGGGACGAGGCGACTCTGAAGAACAAGGCCTTGTTTGAGGG
GGTGACGCAAGTCGTGTCAGCCCTCGGACCGCGATTCGGCGAGGAGGGCA
GCTCCTCGGAGGCCGTTGACTTCCAGGGCGTGCAGTCCGTCATCGAGGCA
GCAGAGGCGTTTCTCGAGCAAGGGGATGGCTCCTTAATAGGCCCGGGTGA
CGGGGAGCGAGTCCTGGTTGCTCCGGGAGACAGCGGCAGCGACGAGCGGG
GTCCAGGAGGTGCGTGGCAGCCTCTGGACGATGTCATCATGGGAGGAAGG
AGTTCCAGCGCCTGGCAGAAGGGGGTGGGAGGGGGTGTGCTGGAGCGGCA
GTCTGGGAAGACGTTCGGTCGCTGGGCGGGGACCCTGGTAACGGAAGGGG
GTGGCTTCTGCGGCACCGTAATCAAGGACATGCCCTTCGACGCCACAGGT
TATGATGGCATTCGGATCCGGGTGCGCGGGGACGGCAGCCGTTACAAGTT
CCGCCTCAAGCCAGACACGAAGCTGGACAACACTGCCGAGCGGCAATATC
AGGCGCCGTTCGATACGGTCAAGGGAGAGTGGGTCGAGGTA
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