mRNA_Ecto-sp13_S_contig15255.3954.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A6H5L5E0_9PHAE (Sacchrp_dh_NADP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5E0_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 5.070e-184 Identity = 273/294 (92.86%), Postives = 279/294 (94.90%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYT----MTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
TDYIDLCGEPEFMQRMTL FHEAAEAKG+LIMHACAFDSVPADLGCLFAAKQF+SP+VCSSVSSF+T NVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP+YSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLF+HEGPTEEQMNEASYT MTFLAKGYSTPPT AEP ATSAAG DPG VEA XXXXXX A EPDVTVVTRVKGPEPG
Sbjct: 114 TDYIDLCGEPEFMQRMTLMFHEAAEAKGVLIMHACAFDSVPADLGCLFAAKQFVSPAVCSSVSSFVTFNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPYYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFSHEGPTEEQMNEASYTTSFEMTFLAKGYSTPPTTAEPSATSAAGVDPGVVEAXXXXXXXXXXAGEPDVTVVTRVKGPEPG 407
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: I2CP78_NANGC (Putative saccharopine dehydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP78_NANGC) HSP 1 Score: 232 bits (592), Expect = 1.020e-69 Identity = 134/295 (45.42%), Postives = 181/295 (61.36%), Query Frame = 1
Query: 1 RTDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSP--SVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSL--AGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
RTDYIDLCGEPEFM R+ L +HE A K +L++ ACAFDSVPADLG + K F++ + +SV SF+ ++ G G GHATTFEAAVHGFGS +DL K+R+E++ K P VG +GGP++E+ + Y FKFPG+D++VV++TQ SL +G A L P Y+AYFT LW A +++ GG+F LA+ WGR+LLL + F+ G FT EGP++E++ + MTF+A GYS EP A S+ G D +VTR+ GPEPG
Sbjct: 139 RTDYIDLCGEPEFMDRILLLYHEEAREKQVLLLSACAFDSVPADLGVIMTRKTFLARGGNALASVESFLNIDTGGKGLHGHATTFEAAVHGFGSISDLAKLRRELKRKMPYDDTRTVGPPLKAKGGPYFEKR--LSRYAFKFPGSDASVVKATQRSLVLSGLVPSAALLPRYAAYFTVPSLWWAGVVSVVGGIFGFLAQRPWGRSLLLAHPALFTLGAFTPEGPSDEELAATHFQMTFIASGYSN----TEPGADSSPLLRKGPC----------------DKVLVTRITGPEPG 411
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A9UV00_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UV00_MONBE) HSP 1 Score: 197 bits (502), Expect = 2.340e-57 Identity = 110/241 (45.64%), Postives = 154/241 (63.90%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTP 726
T+Y+D+ GEPEF++R+ ++++E A+AKGI I+ AC FDS+PADLG LF QF S +SV S++ L+ G G + H T+E+AVHGFGSA +LR +RK + P +P VG R + P ++Q + AY FPG+D+++VR +Q LA + E YSA+FT QL + G VF LA WGR+ LL FS G+F+HEGPTEEQM E +++MTF A+GYS+P
Sbjct: 102 TNYLDISGEPEFIERIEVEYNEQAKAKGITIISACGFDSIPADLGTLFTVSQFPEGSRPASVESYLQLHAGEKGCAVHYATYESAVHGFGSAEELRALRK----RMPKVNVPVVGPRGPKSSLPRFDQR--VNAYALPFPGSDASIVRRSQRYLA-QTESPVSPVQYSAFFTISQLLWTSIFVACGTVFGLLASFEWGRSFLLKYPKVFSMGVFSHEGPTEEQMAETAFSMTFFAQGYSSP 335
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A0D2X0Q6_CAPO3 (Saccharopine dehydrogenase, variant n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0Q6_CAPO3) HSP 1 Score: 197 bits (501), Expect = 1.000e-56 Identity = 109/291 (37.46%), Postives = 165/291 (56.70%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP-HYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
TD++D+ GEP++++ + LK+H+ AE KG+++++ C FDS+PADLG FA +QF +P + S++ S+++++ GP G GH T+E+AVHGFG+ +L ++R++ A +++P V R G F+ + + +C F GAD++VVR TQ E G+ P Y AYFT W FG +FQ A+ +GR +LL + F+ GLF+HEGPT Q+N S++MTF A GYS+ A PD +VTRV GPEPG
Sbjct: 112 TDFLDVSGEPQYLETIALKYHKQAEEKGVIVVNTCGFDSIPADLGTAFAVQQFGTPELVSNIESYLSIHSGPEGMGGHYATYESAVHGFGARGELDQLRRQAGAS---ARLPIVAPPIKRRAGAFFHKE--SDRWCMPFMGADASVVRRTQRVNY---EARGVSPIQYGAYFTISSFWTLILFFFFGSIFQLFARYPFGRKILLKHPKLFTFGLFSHEGPTRRQLNTTSFSMTFYALGYSS---------------------------KDAVETKRPDKKIVTRVAGPEPG 367
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A7S0LIR9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIR9_9EUKA) HSP 1 Score: 196 bits (498), Expect = 3.540e-56 Identity = 109/258 (42.25%), Postives = 154/258 (59.69%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLN--VGPSGYSGHATTFEAAVHGFGSAADLRKVRKEV------QAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRG---EGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEP 744
TD IDLCGEPE++ R+ L AA G+++ HACAFDSVPAD+G LFAA QF SP+ C+ + + T + G +G + + TTF AAVHGFG+ R+ R+++ QA +P +G + RGGPF+ + ++ +CF FPGADSAVVR++Q +L R + L P + YF + ++ FGG+F LA WGR LLL N F+ G F+ EGPT+E ++ S+T F A GYS+ A+ P
Sbjct: 93 TDVIDLCGEPEYIDRIMLHHAGAARKAGVIVAHACAFDSVPADVGTLFAALQFKSPAKCAHATMYHTFSPPAGVAGANANVTTFNAAVHGFGAVGPTREQRRQLMRQLEEQAPGSSKGVPPIGPKLKPRGGPFWNER--LQKWCFLFPGADSAVVRASQRTLVARAPAEQATRLGPQFGGYFCVSSTFSMLRVAFFGGLFNFLATKAWGRRLLLANPQFFTCGAFSSEGPTQEMLDGTSFTTVFEAAGYSSYDAASPP 348
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A2V0NY87_9CHLO (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NY87_9CHLO) HSP 1 Score: 195 bits (495), Expect = 1.010e-55 Identity = 117/247 (47.37%), Postives = 153/247 (61.94%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPR-VGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAE 741
TDY+DLCGEPEF++RM L + + A A G L+ A AFDS+P DLG + A++F P+V SSV S I ++ P G H T+E+AVHG GSA L++VR E + K K P+ VG RP GP ++ G AY FPGAD++VVR TQ +L RGE A H+SA F + A + G TLAK GWGR LLL N G S GL +H GPT+EQM A+ +TF+A+G+S PP +A+
Sbjct: 111 TDYLDLCGEPEFIERMELAYAQPAAASGALMACASAFDSIPNDLGTILVAREFRPPAVPSSVESVIRVSA-PLGLPIHFATWESAVHGIGSAQHLQRVRAEAK-KAGRGKAPKLVGPRPRGAQGPVWDAALG--AYTLPFPGADASVVRRTQMALGARGEPA---VHFSARFAVATRYYAAVAVVVGATLMTLAKHGWGRALLLRNPGLMSYGLVSHAGPTQEQMEAATTEVTFVARGFSAPPESAD 350
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A836CN77_9STRA (Saccharopine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN77_9STRA) HSP 1 Score: 192 bits (489), Expect = 6.460e-55 Identity = 109/246 (44.31%), Postives = 139/246 (56.50%), Query Frame = 1
Query: 10 YIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPS---VCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAA 738
YIDLCGEPEF+ RM LKFH AE K +L++H+CAFDSVPADLG L+AA+QF + + VCSSV SF+TL+ GP+G GHATT+E+AVHGFG+ DLR++RKE+ AKFPP + AYFT A LFGG F L+ S WGR+LLL F++G+FTHEGP+ +Q+ E S+TM +A+GYS AA
Sbjct: 89 YIDLCGEPEFITRMKLKFHAKAEEKRVLVLHSCAFDSVPADLGVLYAAQQFTARTPGGVCSSVESFLTLHTGPAGLGGHATTYESAVHGFGAVEDLRRLRKELAAKFPPPQ----------------------------------------------------------AYFTVPSAAAAGLFVLFGGTFSLLSGSAWGRSLLLKYPALFTKGVFTHEGPSPQQLAETSFTMKLIARGYSAAAAAA 276
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A0G4EWP5_VITBC (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWP5_VITBC) HSP 1 Score: 191 bits (486), Expect = 1.630e-54 Identity = 108/244 (44.26%), Postives = 152/244 (62.30%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQT-PGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPT 732
T Y+D+CGEPEF++RM LK+H+ A G LI+ +C FDSVPAD+G A +QF SP+V V +F+ L +G +G S H TT++ AV GFGSAADL +RKE+ P K+ ++GA+P GPF ++ PG+ F FPGAD++V++ +Q S + + + H + Y M LFGG+F LAK GR LLL G F+ G+FTH GPT+EQ+ + + MT A G+S+ PT
Sbjct: 106 THYLDICGEPEFLERMELKYHQQALGNGCLIVGSCGFDSVPADIGSQVAREQFKSPAVPYKVETFLQLTMGEAGGSIHYTTYQCAVEGFGSAADLSNIRKELAPSKP--KVTKLGAKPKLEKGPFSDKRMPGMSG--FLFPGADASVIKRSQESFTAA-DPSYVSFHPACYILLPDGKAKYLMMLFGGMFSFLAKYSLGRQLLLAAPGIFTYGMFTHSGPTKEQVAQGGFEMTIFASGFSSTPT 344
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A7S4C0M5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0M5_CHRCT) HSP 1 Score: 191 bits (485), Expect = 4.540e-54 Identity = 112/271 (41.33%), Postives = 155/271 (57.20%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNV--GPSGYSGHATTFEAAVHGFGSAADLRKVRKEV----QAKFPPSK--IPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGA----------------------GLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTP 726
TDY+DLCGEPEF++RM L++ +AA G+ ++HACAFDSVPAD+G +F A QF PS C+ V+ + T+ V G SG HATTFEAAVHGF + R+ RK++ +A+ P S P +G R R GPF+ P ++ + F FPGAD+AVVR+TQ +LA G A L P ++AY M +FG +F LA+ WGR LLL + FS G F+ +GP+++ ++ S+ F GYS P
Sbjct: 91 TDYVDLCGEPEFIERMALRYGDAARDAGVRVVHACAFDSVPADIGAIFTAMQFTPPSRCAHVNMYHTVKVAEGASGAYAHATTFEAAVHGFAGVGEAREQRKQLLDRMEARAPGSSKGAPPIGPRLRARPGPFFH--PRLQKWAFLFPGADAAVVRATQRALAASGANAVSDAAPGDATAAPPNTASGGAAQLSPQFAAYVCVNTTSAMVVMAIFGTLFNFLARRDWGRKLLLAHPKLFSWGAFSRKGPSKQMLDGTSFCSWFEGCGYSNP 359
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: F2U775_SALR5 (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U775_SALR5) HSP 1 Score: 188 bits (477), Expect = 2.780e-53 Identity = 124/291 (42.61%), Postives = 164/291 (56.36%), Query Frame = 1
Query: 4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP-HYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
T Y+D+CGEPEF++RM + E A G I+ AC FDS+PADLG +F KQF + + SSV SF+ + G +G H TFE+AVHGF SA +LR +R++ + K +P VG R ++R G E YC FPG+D+++VR +Q L + GA + P Y+A+F+ + M G VF LA +GR+LLL F+ G+FTH+GPTEEQM S+ M F+AKGY TSAA A E A PDVTV TRV GPEPG
Sbjct: 108 THYLDICGEPEFIERMEYLYDEQARQTGATIISACGFDSIPADLGTMFTVKQFTNGQIPSSVESFLQIKSGEAGTKVHFATFESAVHGFASAGELRDLRRK-KGKVT---VPVVG-RKLKRPGMLPEWREDGHGYCIPFPGSDASIVRRSQQYL--QAHGAEVQPVQYAAWFSLPSGFWTGVMMAAGTVFGALANFSFGRSLLLKFPELFTLGVFTHDGPTEEQMRATSFEMNFVAKGY-----------TSAAAA---EARGA------------PDVTVKTRVSGPEPG 365 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15255.3954.1 >prot_Ecto-sp13_S_contig15255.3954.1 ID=prot_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp RTDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAback to top mRNA from alignment at Ecto-sp13_S_contig15255:11..4149+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15255.3954.1 ID=mRNA_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4139bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15255:11..4149+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15255:11..4149+ >mRNA_Ecto-sp13_S_contig15255.3954.1 ID=mRNA_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15255:11..4149+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |