mRNA_Ecto-sp13_S_contig15242.3947.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: A0A6H5KMQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ6_9PHAE) HSP 1 Score: 522 bits (1344), Expect = 7.330e-179 Identity = 297/338 (87.87%), Postives = 317/338 (93.79%), Query Frame = 1
Query: 19 VQDEKRFRKKLAEAMKRSPSGEVDTVHELVEEAATKGFRSVAIDEAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSSALKVEIIKLRNTVEDLTRTVHKKELISTAQAGALRAERAKSEADRNEAAAEAKYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAAQ-ESERSDLSLRLVEQEAANTRASTLAVAEELSKAQQREIELQCLLDVGMDTRKELEDELALCRTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFDNDDRWGSHAGYPMIR 1029
V+DEKRF K+LA+A+K S SG+V+TV ELVEEAATKGFRSVAIDEAATAV K+EQQERVLA RSLPGAVVDYVSTTSLDAARRS+ALK +I+KL+NTVEDLTRT+HKKELISTAQAGA RAERAKSEADRNEAAAEAKYFR EVEALR TVDYVLETA SDHETS RTE +LV KLDTAEGIVAALTDT+AEQQLAAQ ESE+SDLSLRLVEQEAA RASTLAV EELS+A+QREIELQCLLDVG DTRKELEDELALC+TNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPF++ DRWGSHAGYPMIR
Sbjct: 208 VRDEKRFGKRLAKAIKSSSSGDVETVRELVEEAATKGFRSVAIDEAATAVFKQEQQERVLAFFRSLPGAVVDYVSTTSLDAARRSNALKAKIVKLKNTVEDLTRTLHKKELISTAQAGAFRAERAKSEADRNEAAAEAKYFRDEVEALRVTVDYVLETAASDHETSARTESDLVEKLDTAEGIVAALTDTVAEQQLAAQKESEQSDLSLRLVEQEAAKARASTLAVGEELSEAEQREIELQCLLDVGTDTRKELEDELALCQTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFNDADRWGSHAGYPMIR 545
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7G4D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D4_ECTSI) HSP 1 Score: 519 bits (1336), Expect = 1.220e-178 Identity = 294/339 (86.73%), Postives = 315/339 (92.92%), Query Frame = 1
Query: 16 FVQDEKRFRKKLAEAMKRSPSGEVDTVHELVEEAATKGFRSVAIDEAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSSALKVEIIKLRNTVEDLTRTVHKKELISTAQAGALRAERAKSEADRNEAAAEAKYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAAQ-ESERSDLSLRLVEQEAANTRASTLAVAEELSKAQQREIELQCLLDVGMDTRKELEDELALCRTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFDNDDRWGSHAGYPMIR 1029
+ +DEKRF KKLA+A K SPSG VDT+ LVEEAATKGFRSVAI+EAA VAK+EQQERVLA RSLPGAVVDYVSTTSLDAARRS+ALK EI+KLRNTV+DLTRTVH+KELISTAQA AL AE+AKS+ADRNEAAAEAKYFR EVEALRATVDYVLETA SDHETS RTEG+L+AKLDTAEGIVAALTDT+AEQQLAAQ ESERSDLSLRLVEQEAA RASTLA+ EELS+A+QREIELQCLLDVG DTRKELEDELALCRTNV+EARAIAESYGADIEDLDSRALAVALALADDV+EKA VESLAHVA+GAVLGATPPFDNDDRWGSHAGYPMIR
Sbjct: 175 YGKDEKRFMKKLAKATKSSPSGSVDTIRGLVEEAATKGFRSVAIEEAAMVVAKQEQQERVLAFFRSLPGAVVDYVSTTSLDAARRSNALKAEIVKLRNTVKDLTRTVHEKELISTAQASALTAEQAKSKADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEGDLIAKLDTAEGIVAALTDTVAEQQLAAQKESERSDLSLRLVEQEAAMARASTLAIEEELSEAEQREIELQCLLDVGTDTRKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDVAEKASTVESLAHVAEGAVLGATPPFDNDDRWGSHAGYPMIR 513
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7G5N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N0_ECTSI) HSP 1 Score: 454 bits (1168), Expect = 2.260e-156 Identity = 256/289 (88.58%), Postives = 272/289 (94.12%), Query Frame = 1
Query: 166 VAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSSALKVEIIKLRNTVEDLTRTVHKKELISTAQAGALRAERAKSEADRNEAAAEAKYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAAQ-ESERSDLSLRLVEQEAANTRASTLAVAEELSKAQQREIELQCLLDVGMDTRKELEDELALCRTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFDNDDRWGSHAGYPMIR 1029
VAK+EQQERVLA RSLPGAV DYVSTTSLDAARRS+ALK EI+KLRNTV+DLTRTVH+KELISTAQA AL A++AKSEADRNEAAAEAKYFR EVEALRATVDYVLETA SDHETS RTEG+LVAKLDTAEGIVAALTDT+AEQQLAAQ ESERS+LSLRLVEQEAA RASTLAV EELS+A+QREIELQCLLDVG DT KELEDELALCRTNV+EARAIAESYGADIEDLDSRALAVALALADD++EKA VESLAHVA+GAVLGATPPFDNDDRWGSHAGYPMIR
Sbjct: 3 VAKQEQQERVLAFFRSLPGAVFDYVSTTSLDAARRSNALKAEIVKLRNTVKDLTRTVHEKELISTAQASALTAQQAKSEADRNEAAAEAKYFRDEVEALRATVDYVLETAASDHETSARTEGDLVAKLDTAEGIVAALTDTVAEQQLAAQKESERSELSLRLVEQEAATARASTLAVEEELSEAEQREIELQCLLDVGTDTSKELEDELALCRTNVNEARAIAESYGADIEDLDSRALAVALALADDIAEKASTVESLAHVAEGAVLGATPPFDNDDRWGSHAGYPMIR 291
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7FUJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ2_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.690e-113 Identity = 215/361 (59.56%), Postives = 248/361 (68.70%), Query Frame = 1
Query: 166 VAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSSALKVEIIKLRNTVEDLTRTVHKKELISTAQAGALRAERAKSEADRNEAAAEAKYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAAQ-ESERSDLSLRLV-------EQEAANTRASTLAVAEEL-----------------------------------------------------------------SKAQQREIELQCLLDVGMDTRKELEDELALCRTNVDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPFDNDDRWGSHAGYPMIR 1029
VAK++QQERVL R LPG VVDYVSTTSLDAARRS+ALK EI+ LRNT E+L RTVH+K++ S+AQA +R ERAKSEADRN A A+ +Y R E ALRAT+DYV E+A SD ET RTEG+LV KLDTAEG +AALT+T+AEQQLAAQ ESERS L+LRLV +QEAA +RASTLAV EEL SKA+ RE+ELQCLLDVG D R ELED+L LCR+NVDEARAI ESYGADIEDLDSRALAVALALA++VSEKAL+++SLAHVAQGAVL TP FD++DRWGS AGYPM+R
Sbjct: 3 VAKQDQQERVLVFFRRLPGVVVDYVSTTSLDAARRSNALKAEIVMLRNTFENLQRTVHRKDVFSSAQADVIRTERAKSEADRNLAGAQMQYLREEAGALRATIDYVEESAASDRETWARTEGDLVEKLDTAEGAIAALTETVAEQQLAAQRESERSQLALRLVVGELDVSQQEAAMSRASTLAVREELESWEQDLSDTDSASVDVSLFAAERTNEGHFLEPVTCPAVDVAKLGVNDRSASHEAAERTWCQVDESKARHREMELQCLLDVGNDMRNELEDDLTLCRSNVDEARAITESYGADIEDLDSRALAVALALANNVSEKALVIDSLAHVAQGAVLRVTPAFDSEDRWGSLAGYPMVR 363
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI) HSP 1 Score: 101 bits (252), Expect = 1.760e-20 Identity = 68/104 (65.38%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 433 KYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAAQ-ESERSDLSLRLVE-------QEAANTRASTLAVAEELSKAQQ 720
K FR EVEALRA +D+V ETA SD ETS RTEG+ V L TAEG +AALT+T+ EQQLA Q ESERSDLSLRLVE QEAA RASTLAV E L +Q
Sbjct: 84 KSFREEVEALRAIIDHVEETAASDRETSARTEGDPVPNLSTAEGTIAALTETVGEQQLATQRESERSDLSLRLVESNREASLQEAAKARASTLAVREGLESCEQ 187
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7FUJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ8_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 8.070e-20 Identity = 62/122 (50.82%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 22 QDEKRFRKKLAEAMKRSPSGEVDTVHELVEEAATKGFRSVAID-----------------------------------------EAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAA 264
+DEK FRKKLAEAMKR PSG+VDT+ ELVEEA TKGFRS+AID A T VAK++QQE++ A SLPGAVVDYVSTTSLDAA
Sbjct: 17 RDEKCFRKKLAEAMKRCPSGDVDTIRELVEEADTKGFRSIAIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATTVVAKQDQQEKIFAFFTSLPGAVVDYVSTTSLDAA 138
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7FIQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ9_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 2.150e-16 Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 73 PSGEVDTVHELVEEAATKGFRSVAIDEAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSS 276
PSG+V+ V ELVEEA TKGFRS IDEAA VAK++QQ++V A RSLP AVVD+V++TSLD A RS+
Sbjct: 36 PSGDVEAVRELVEEATTKGFRSATIDEAANDVAKQDQQKKVFAFFRSLPCAVVDHVTSTSLDIAERST 103
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7FRE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE5_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 4.680e-16 Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 808 VDEARAIAESYGADIEDLDSRALAVALALADDVSEKALIVESLAHVAQGAVLGATPPF 981
VDEAR IA+SYGADIEDLDSRALAVA LADDVSEKAL+VESLA VA AVL ATP +
Sbjct: 40 VDEARQIADSYGADIEDLDSRALAVAFTLADDVSEKALLVESLATVAHEAVLWATPAY 97
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: D7FRC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC7_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 3.550e-15 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 73 PSGEVDTVHELVEEAATKGFRSVAIDEAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSS 276
PSG+V+ V ELVEEA TKGFRS IDE A VAK++QQ+ VLA RSLP AVVD+V++TSLD A RS+
Sbjct: 82 PSGDVEAVRELVEEATTKGFRSATIDEDANDVAKQDQQKMVLAFFRSLPCAVVDHVTSTSLDIAERST 149
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Match: A0A6H5JBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW0_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 4.560e-13 Identity = 77/210 (36.67%), Postives = 109/210 (51.90%), Query Frame = 1
Query: 73 PSGEVDTVHELVEEAATKGFRSVAIDEAATAVAKKEQQERVLALLRSLPGAVVDYVSTTSLDAARRSSALKVEIIKLRNTVEDLTRTVHKKELISTAQAGALRAERAKSEADRNEAAAEAKYFRYEVEALRATVDYVLETATSDHETSVRTEGNLVAKLDTAEGIVAALTDTIAEQQLAA-QESERSDLSLRLVEQEAANTRASTLAVAE 699
P ++ V LV+EA TKGFRS IDE AV + ++QE+ + S P +V T D A + L + KL + + + +S+ +R ++ R ++ AL+ T + VL TA SD E S RTEG L+AKLDTAE +A+LTDT+AEQQLAA ESER D +LR ++ E +R + A E
Sbjct: 25 PPSDIKLVRALVDEATTKGFRSSVIDEGMKAVNRHDEQEKAFDIF-SAPCMLV-----TLGDGAVEKAGLSAILGKLSPCLNERSPAPPTTNALSSTWPMVPYHQRHSNKQ------------RKKILALQLTNNKVLSTAASDKERSARTEGELLAKLDTAEYTIASLTDTVAEQQLAAAMESERFDQALRQLDNELQTSRQAARAELE 216 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15242.3947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15242.3947.1 >prot_Ecto-sp13_S_contig15242.3947.1 ID=prot_Ecto-sp13_S_contig15242.3947.1|Name=mRNA_Ecto-sp13_S_contig15242.3947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=343bp MYAFPFVQDEKRFRKKLAEAMKRSPSGEVDTVHELVEEAATKGFRSVAIDback to top mRNA from alignment at Ecto-sp13_S_contig15242:27..2134- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15242.3947.1 ID=mRNA_Ecto-sp13_S_contig15242.3947.1|Name=mRNA_Ecto-sp13_S_contig15242.3947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2108bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15242:27..2134- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15242:27..2134- >mRNA_Ecto-sp13_S_contig15242.3947.1 ID=mRNA_Ecto-sp13_S_contig15242.3947.1|Name=mRNA_Ecto-sp13_S_contig15242.3947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15242:27..2134- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |