mRNA_Ecto-sp13_S_contig15209.3924.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A6H5JCW2_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW2_9PHAE) HSP 1 Score: 300 bits (768), Expect = 1.040e-94 Identity = 157/178 (88.20%), Postives = 158/178 (88.76%), Query Frame = 1
Query: 196 MSTSSAAEAAAVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQATPSQS---PXXXXXXXXXXPSEDVD 720
MSTSSAA A AVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETF+TDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQA P PSEDVD
Sbjct: 1 MSTSSAAPAPAVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAXXXXXXXPPPGNERTEVQEPSEDVD 178
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: D8LJ74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ74_ECTSI) HSP 1 Score: 198 bits (504), Expect = 2.290e-61 Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 196 MSTSSAAEAAAVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGY 501
MST S++ AAAVAILPAK PLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETF+TDFDFMKDAGY
Sbjct: 1 MSTPSSSAAAAVAILPAKTPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGY 102
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A7S1EDE4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EDE4_HEMAN) HSP 1 Score: 158 bits (400), Expect = 2.730e-41 Identity = 87/164 (53.05%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 127 VASGFGPLGLVQRRTTSSRPRVVMSTSSAAEAAAVAILPAKAPLPLLD-DGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLR 615
++SGF R T+ SR R + S + AAA I+ + PLP L +G ++ SFNVLLPN DGWW+YK + P V EHR WP R+ LM E +LS ADIV +QEA+AE+F+ DF FM DAGY HVLH+K RFR+ATFFKT R EL S+ +DR LVT L+
Sbjct: 48 LSSGFA------RTTSFSRTR----SGSGSSAAARMIISPQEPLPQLGAEGFSLASFNVLLPNSKDGWWIYKYFGPSVSAEHREWPHRQKLMSEIMLSAKADIVAIQEAAAESFEEDFAFMSDAGYSHVLHSKLRFRTATFFKTDRFELLSQFPRDRGLVTALK 201
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A7S1UNX6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNX6_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.930e-37 Identity = 78/154 (50.65%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 175 SSRPRVVMSTSSAAEAAAVAILPAKAPLPLL-------DDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLR 615
SS ++ T E +V ILPA+ PLP D +++S+NVLLPN D WW +K Y V E R WP R L+RE LL ADIVC+QEA +TF+ DF FM DAGYDHVLH KFRFR ATFF+ +R + HKDR LVT LR
Sbjct: 48 SSTSALLHETDQVDETTSVPILPARQPLPSFFSVDDNDKDQFSLLSWNVLLPNSQDNWWCHKQYASWVDVEKRQWPHRHGLIRERLLESKADIVCIQEADGDTFEDDFAFMSDAGYDHVLHRKFRFRCATFFQRNRFAIEEIAHKDRTLVTSLR 201
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: D8LJ73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ73_ECTSI) HSP 1 Score: 138 bits (348), Expect = 5.410e-36 Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 3
Query: 495 RLRPRAAHQVSLSFRHVLQDVAAGASVREAQGQGARHRPP--HPTSGHERAVVASHTLAIATSTSWHRGARTIRRRRLREISR 737
+LRPRA HQVSLSFRH+LQDVAAGASVREAQGQGARH PP HPTSGHERAVVAS+TLAIATSTSWHRGARTIRRRR EISR
Sbjct: 22 KLRPRATHQVSLSFRHILQDVAAGASVREAQGQGARHGPPPPHPTSGHERAVVASNTLAIATSTSWHRGARTIRRRRPGEISR 104
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A7S4HMQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HMQ6_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.340e-33 Identity = 71/140 (50.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 235 ILPAKAPL--PLLDDG---------LTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTL 621
ILPA+ PL DD +V+S+N+LLPN D WW +K + P VP E R W R+AL+R+ LL ADIVC+QEA ETF+ DF FM++AGY+H LH KFRFR ATFF+ + L HKDR LVT LR++
Sbjct: 83 ILPARQPLHSAFADDSSGGMPCKQDFSVLSWNILLPNSQDNWWCHKMFAPWVPMEKREWLHRQALIRDRLLLAGADIVCIQEADGETFERDFAFMEEAGYEHCLHRKFRFRCATFFRKDKFALEQVAHKDRTLVTELRSI 222
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: B7FQS6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQS6_PHATC) HSP 1 Score: 133 bits (334), Expect = 1.730e-32 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 277 LTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHR---VWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYD-HVLHTKFRFRSATFFKTSRLELASEK-HKDRVLVTGLRTLPPAT 633
L+V+S+N+LLPN DGWW YK Y P +PE + W FRK L+RE + + DADIVC+QE S +FDTDFDFM++ GYD + K RFR ATF+KTSR E+ + HKDR L+T R LPP T
Sbjct: 24 LSVLSYNILLPNSMDGWWNYKMYSPPLPESKQHVSSWNFRKDLLRERIATVDADIVCLQEVSPVSFDTDFDFMRELGYDGKEMFKKGRFRPATFWKTSRCEIVTPPVHKDRTLLTAFRVLPPPT 147
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A7S3UUW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUW7_HETAK) HSP 1 Score: 121 bits (304), Expect = 2.730e-31 Identity = 52/100 (52.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 274 GLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKF----RFRSATFFKTSR 561
G +V+S+NVLLPN +DGWW+YK+YQ HVP +HR W R +L+ + ++ +ADI+C+QEAS ++F+ DFDFM+ AGY V+H K R R ATFF+ R
Sbjct: 1 GFSVMSYNVLLPNSHDGWWIYKNYQKHVPRQHRAWGHRSSLLEKQIVGSNADIICIQEASGDSFEEDFDFMEKAGYGSVVHAKGVNKGRMRMATFFRAGR 100
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: R1BIY3_EMIHU (EF-hand domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIY3_EMIHU) HSP 1 Score: 132 bits (331), Expect = 3.580e-31 Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query: 280 TVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLV 603
+++S+N+LLPNG D WW K YQPHVP + R W R+ L+R+ LL DADIVCVQEA+ +TF +DF+F+ GY+ VLH KFRFR ATF++ S +L S H+DR LV
Sbjct: 45 SLLSWNILLPNGEDNWWCEKMYQPHVPHDCRQWSHRQRLIRDRLLLADADIVCVQEAAGDTFASDFEFLHADGYESVLHKKFRFRCATFYRPSAFKLLSVAHEDRALV 152
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Match: A0A7S2V1N9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1N9_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.730e-31 Identity = 55/109 (50.46%), Postives = 81/109 (74.31%), Query Frame = 1
Query: 277 LTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFDTDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLV 603
L+V+S+NVLLPN DGWW+YK Y+ HVPEEHR W +R+ L++ LL +AD++C+QE S ++F++DF F+++AGY+ + H K R R ATF++ +LE H DRVL+
Sbjct: 118 LSVLSYNVLLPNSADGWWIYKYYKHHVPEEHRTWEYRQQLLKVQLLGSEADVICLQETSPKSFESDFAFLREAGYESIQHNKGRLRCATFWRADKLEQVLCTHSDRVLL 226 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15209.3924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15209.3924.1 >prot_Ecto-sp13_S_contig15209.3924.1 ID=prot_Ecto-sp13_S_contig15209.3924.1|Name=mRNA_Ecto-sp13_S_contig15209.3924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=250bp MLVLRGVPSRCFWLWPAGFGAAPHNEQSASSRHVNIISSRSCSSGDPPGKback to top mRNA from alignment at Ecto-sp13_S_contig15209:2..1606- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15209.3924.1 ID=mRNA_Ecto-sp13_S_contig15209.3924.1|Name=mRNA_Ecto-sp13_S_contig15209.3924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1605bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15209:2..1606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15209:2..1606- >mRNA_Ecto-sp13_S_contig15209.3924.1 ID=mRNA_Ecto-sp13_S_contig15209.3924.1|Name=mRNA_Ecto-sp13_S_contig15209.3924.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15209:2..1606- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |