mRNA_Ecto-sp13_S_contig15164.3893.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15164.3893.1
Unique NamemRNA_Ecto-sp13_S_contig15164.3893.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: D7G997_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G997_ECTSI)

HSP 1 Score: 667 bits (1720), Expect = 1.460e-235
Identity = 331/361 (91.69%), Postives = 342/361 (94.74%), Query Frame = 1
Query:    1 EGDKGVNIDSGTRSEHFGGAQRRHQQWLTRRAAELRDEGPALPSSAWSHAGRLAKGTFSRGGSPIPPPPGGIAGAGPLPTEGGAASVEERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWSGNAWRARSNTSSSQEGGGDADDNTRGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGATLANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGPSLPVPRGGNNQ 1083
            EGDKGVNIDSGTRSEHFGG QRRHQQ LTRRAAELRDEGPALP SAW+H GRLAKG FSRGGS +PPPPG IAGAGPLPT+ GAASVEERV+RMEEGVRLWG TFVPPVEP RRL LIDKWSGNA R R+NTSSSQEGGGDAD+NTRGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDE+REACEAGFSP VHLIAAWELS VEVF+RDRLFCRRTG HVP+SLEVHPSSIGNDLSIKHRIFMKPRLEEFDLF+QVEDDVIVTLNHMLLFREESELLDGRRHSDGA LANTAVPGFIRVEHAA EEGTI GPSSGEEWQEWEVMLSRLRPVKLEEAGI+LTLGPSLPVPRGGNNQ
Sbjct:  243 EGDKGVNIDSGTRSEHFGGVQRRHQQRLTRRAAELRDEGPALPGSAWAHVGRLAKGVFSRGGSRVPPPPGTIAGAGPLPTDVGAASVEERVHRMEEGVRLWGATFVPPVEPTRRLELIDKWSGNAGRGRTNTSSSQEGGGDADENTRGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEIREACEAGFSPTVHLIAAWELSGVEVFVRDRLFCRRTGAHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFIQVEDDVIVTLNHMLLFREESELLDGRRHSDGAPLANTAVPGFIRVEHAAEEEGTIAGPSSGEEWQEWEVMLSRLRPVKLEEAGIFLTLGPSLPVPRGGNNQ 603          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: A0A6H5K627_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K627_9PHAE)

HSP 1 Score: 604 bits (1557), Expect = 2.830e-210
Identity = 314/410 (76.59%), Postives = 327/410 (79.76%), Query Frame = 1
Query:    4 GDKGVNIDSGTRSEHFGGAQRRHQQWLTRRAAELRDEGPALPSSAWSHAGRLAKGTFSRGGSPIPPPPGGIAGAGPLPTEGGAASVEERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWSGNAWRARSNTSSSQE------GGGDADDNTRGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGATLANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSR----------------------------------------------------LRPVKLEEAGIYLTLGPSLP 1059
            GDKGV+IDSGTRSEHFGG QR HQQWL RRAAELRDEGPALP S W+H G +AK   SRGGS +PPPP GIAGAGPLPT+G AASVEERV+RMEEGVRLWGGTFVPPVEP RRL LIDKWSG+A R RS TS+SQE         D  +N+RGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVF+RDRLFCRRTGGHVP+SLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLD RRHSDGATLANTAVPGFIRVEHAAGEEGT+VGPSSGEEWQEWEVMLSR                                                    L PVKLEEAGIYLTLGPSLP
Sbjct:  243 GDKGVSIDSGTRSEHFGGVQRGHQQWLMRRAAELRDEGPALPGSVWAHVGSIAKEVISRGGSWVPPPPAGIAGAGPLPTDGAAASVEERVHRMEEGVRLWGGTFVPPVEPTRRLELIDKWSGHAGRGRSKTSNSQEVSSFDYRSSDGGENSRGDDAGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFVRDRLFCRRTGGHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDSRRHSDGATLANTAVPGFIRVEHAAGEEGTVVGPSSGEEWQEWEVMLSRRRSSLGEGIEEGIGSMNATRRMHHRRSLCFFSSTLNELFFLDSLGMNGVFTRLHPVKLEEAGIYLTLGPSLP 652          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: D8LJ04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ04_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.790e-85
Identity = 147/281 (52.31%), Postives = 194/281 (69.04%), Query Frame = 1
Query:  250 AASVEERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWSGNAWRARSNTSSSQEGGGDADDNTRGDDAGRILFVMTSFDRGRRLGPSF--KKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGAT-LANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGPSLPVPRGGNNQ 1083
            + +  ER +R++ G  LW GT+VPP+EP RR  L+ KWS             +E  G       G ++GRIL+V++S+DR +RLG  +  K DKLD+IL+MMDEM+EACE GFSP+VHLIAAW+ SEV   IRDRLFC+RTG  VP+S E HP S+ N+L+IKHRI+MKPR+E+FD+F+QVEDD+IVTLNH+LL+REE + L+ R    G+    N  VPGF+RVE   G +        GE W EWE++LSRL P+K+  AG Y++L PS  +PR GNNQ
Sbjct:  319 SVAATERAWRLKRGAELWRGTYVPPIEPTRRRELVYKWSYGK--------GPEEAAG-----ATGGESGRILYVISSYDRRKRLGLGYDGKVDKLDYILMMMDEMKEACEGGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGELVPYSSEEHPPSVRNNLAIKHRIYMKPRVEDFDVFMQVEDDMIVTLNHILLYREECDNLEKRLGMGGSRGRPNVFVPGFLRVE-PGGTKDKEKDKWEGE-WFEWEIVLSRLNPIKIYGAGTYMSLSPSKVLPRAGNNQ 584          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: A0A6H5KYA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA1_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 2.190e-81
Identity = 147/276 (53.26%), Postives = 190/276 (68.84%), Query Frame = 1
Query:  265 ERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWSGNAWRARSNTSSSQEGGGDADDNTRGDDAGRILFVMTSFDRGRRLGPSF--KKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGAT-LANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGPSLPVPRGGNNQ 1083
            ERV+R++ G  LW GT+VPP+EP RR  LI KWS             +E  G       G ++GRIL+V++S+DRG+RLG  +  K DKLD+IL+MMDEMREACEAGFSP+VHLIAAW+ SEV   IRDRLFC+RTG  VP+S E HP S+ N+L+IKHRI+MK R+E+FD+F+QVEDD+IVTLNH+LL+REE + LD R    G+    N  VPGF+RVE   G +        GE W EWE++ +   P+ +  AG Y++L PS  +PR GNNQ
Sbjct:  410 ERVWRLKRGAELWPGTYVPPIEPTRRRELIYKWSYGK--------GPEEAAG-----ATGGESGRILYVISSYDRGKRLGLGYNGKVDKLDYILMMMDEMREACEAGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGDLVPYSHEEHPPSVRNNLAIKHRIYMKSRVEDFDVFMQVEDDMIVTLNHILLYREECDNLDIRFGMGGSRGRPNVFVPGFLRVE-PGGTKDKEKDKGEGE-WFEWEIVFN---PINIYGAGTYMSLTPSKVLPRAGNNQ 667          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: D7G8K3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K3_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 4.590e-71
Identity = 146/300 (48.67%), Postives = 182/300 (60.67%), Query Frame = 1
Query:  208 GGIAGAGPLPTEGGAASVEERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWS--GNAWRARSNTSSSQEGGGDADDNTRGD--DAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEMREACEAGFSPNVHLIAAWELS-EVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDG--ATLANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGPSLPVPRGGNNQ 1083
            G +A   PLP       +EER+ R+E GV LWG T+VPP+ P     L DKW+  G    A                 T     +A  ILFV+TSFDRGRRLG   K  DKL+++L++MDE+R ACEAGFSP+VHLI+AWE   EVE+F  DRL CRR GG V  +LE HP SI   LSIKHRI+MKPR+ E+DLF+Q+EDD+I+T+NH+L + EESE L  R       A   +  +PGF+RVE   G  G       G EW EWE++LSR R V +  AG YL L  S  +P  GNNQ
Sbjct:    4 GEVAAFEPLP-------LEERLGRLETGVELWGATYVPPIAPEEMRRLTDKWTAVGAVSGAXXXXXXXXXXXXXXXXXTAATTVEAPSILFVVTSFDRGRRLGRRGKGVDKLNYVLMIMDEIRGACEAGFSPHVHLISAWEAQPEVELFT-DRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILKYLEESEKLSLRNIGTRPRAMPMHDYMPGFVRVEPEPGATGV------GGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPFSGNNQ 289          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: A0A6H5JCA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA6_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.650e-68
Identity = 150/337 (44.51%), Postives = 191/337 (56.68%), Query Frame = 1
Query:  151 GRLAKGTFSRGGSPIPPPPGGIAGAG-----PLPTEGGAASVEERVYRMEEGVRLWGGTFVPPVEPARRLALIDKWSG-----------------NAWRARSNTSSSQEGGGDADDNTRGDDAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEMREACEAGFSPNVHLIAAWELS-EVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSD--GATLANTAVPGFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGPSLPVPRGGNNQ 1083
            G   +G F   G   PP  G + G       PLP       +EER+ R+E GV LWG T+VPP+ P     L +KW+                        S T++  +            +   ILFV+TSFDRGRRLG   K  DKLD++L++MDE+R ACEAGFSP+VHLI+AWE   E+E+F  DRL CR+ GG V  +LE HP SI   LSIKHRI+MKPR+ E+DLF+Q+EDD+I+T+NH+L + EESE L  R      GA   +  +PGFIRVE   G  G       G EW EWE++LSR R V +  AG YL L  S  +P  GNNQ
Sbjct:  269 GGKGEGGFRALGDEPPPGQGDMEGGEVAAFEPLP-------LEERLSRLETGVELWGATYVPPIAPKEMRRLTEKWTAVGAVSGAXXXXXXXXXXXXXXXASTTAAPDQV-----------EMPSILFVVTSFDRGRRLGLRRKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWEAQPELELFT-DRLLCRKIGGPVTLTLEKHPPSIKETLSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGSRPGAMPMHDYMPGFIRVEPKPGATGV------GGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPISGNNQ 580          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: A0A7S1YD73_9EUKA (Hypothetical protein n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YD73_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 2.760e-21
Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 1
Query:  454 GRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGATLANTAVPGFIRVE 918
            GRIL++++S DRG R+   ++ DK   IL  M E R  CE G +  V    AW L E+   I  +L+C R    +P   +  P S+G +LS KHR  ++  LEEFDLF+ +EDD+ + L  +  +  +  LL    +SD        V G +R E
Sbjct:   56 GRILWMISSTDRGERIRSQYRGDKFSIILRQMREARFLCEFGHTVQVSFQTAWPLEELSDEIDAQLYCERINARIPVWYQEWPKSVGGELSSKHRTVVREHLEEFDLFVHMEDDIHIRLEQVQAYWRQDFLLTQAGYSD------KFVSGLMRYE 204          
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Match: A0A7S3MI24_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MI24_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.780e-13
Identity = 43/137 (31.39%), Postives = 74/137 (54.01%), Query Frame = 1
Query:  508 SFKKDKLDFILLMMDEMREACEAGFSPNV--HLIAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGATLANTAVPGFIR 912
            +F    +D +LL+ +E    CE G+ P V  H    W  S +  + R R +C R G  +   L+VH SS+G  L++KH+I ++  + + D F+  EDD+I   +H++ +  E++ L     S+  T   ++V GF+R
Sbjct:   47 NFNFKHIDPLLLIFNEYVSMCEGGWEPTVVLHTTVNWT-STMHRYFRQRTYCYRKGASINIRLDVHDSSVGTGLAMKHKIILQQEINDHDFFVYHEDDIIFKYSHLVGYLNETKKL---HDSNPETELQSSVIGFLR 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15164.3893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G997_ECTSI1.460e-23591.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K627_9PHAE2.830e-21076.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ04_ECTSI1.790e-8552.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA1_9PHAE2.190e-8153.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8K3_ECTSI4.590e-7148.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCA6_9PHAE2.650e-6844.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1YD73_9EUKA2.760e-2136.13Hypothetical protein n=1 Tax=Sexangularia sp. CB-2... [more]
A0A7S3MI24_9STRA4.780e-1331.39Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15164contigEcto-sp13_S_contig15164:196..3732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score67.0
Seed ortholog evalue2.1e-08
Seed eggNOG ortholog2903.EOD22716
Model size1101
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2D0HW@1,2SE92@2759
Cds size1101
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15164.3893.1prot_Ecto-sp13_S_contig15164.3893.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15164 196..3732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462806.7888389-CDS-Ecto-sp13_S_contig15164:195..6061681462806.7888389-CDS-Ecto-sp13_S_contig15164:195..606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 196..606 +
1681462806.7996626-CDS-Ecto-sp13_S_contig15164:1232..13941681462806.7996626-CDS-Ecto-sp13_S_contig15164:1232..1394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 1233..1394 +
1681462806.8091698-CDS-Ecto-sp13_S_contig15164:1766..19251681462806.8091698-CDS-Ecto-sp13_S_contig15164:1766..1925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 1767..1925 +
1681462806.8187222-CDS-Ecto-sp13_S_contig15164:2374..24251681462806.8187222-CDS-Ecto-sp13_S_contig15164:2374..2425Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 2375..2425 +
1681462806.8290458-CDS-Ecto-sp13_S_contig15164:2935..31501681462806.8290458-CDS-Ecto-sp13_S_contig15164:2935..3150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 2936..3150 +
1681462806.8389735-CDS-Ecto-sp13_S_contig15164:3629..37321681462806.8389735-CDS-Ecto-sp13_S_contig15164:3629..3732Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15164 3630..3732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15164.3893.1

>prot_Ecto-sp13_S_contig15164.3893.1 ID=prot_Ecto-sp13_S_contig15164.3893.1|Name=mRNA_Ecto-sp13_S_contig15164.3893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
EGDKGVNIDSGTRSEHFGGAQRRHQQWLTRRAAELRDEGPALPSSAWSHA
GRLAKGTFSRGGSPIPPPPGGIAGAGPLPTEGGAASVEERVYRMEEGVRL
WGGTFVPPVEPARRLALIDKWSGNAWRARSNTSSSQEGGGDADDNTRGDD
AGRILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEMREACEAGFSPNVHL
IAAWELSEVEVFIRDRLFCRRTGGHVPFSLEVHPSSIGNDLSIKHRIFMK
PRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDGRRHSDGATLANTAVP
GFIRVEHAAGEEGTIVGPSSGEEWQEWEVMLSRLRPVKLEEAGIYLTLGP
SLPVPRGGNNQVRYVF*
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mRNA from alignment at Ecto-sp13_S_contig15164:196..3732+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15164.3893.1 ID=mRNA_Ecto-sp13_S_contig15164.3893.1|Name=mRNA_Ecto-sp13_S_contig15164.3893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3537bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15164:196..3732+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAAGGCGACAAGGGGGTGAACATCGACTCCGGGACACGGTCCGAGCATTT CGGCGGCGCGCAGCGGCGGCACCAGCAGTGGCTGACGCGCCGCGCGGCAG AGCTCCGGGACGAAGGGCCAGCGCTGCCCAGTTCGGCGTGGTCACACGCT GGGAGACTTGCGAAGGGGACTTTCTCGAGAGGGGGAAGCCCGATACCGCC CCCCCCCGGTGGGATTGCGGGCGCGGGGCCCCTGCCGACGGAGGGTGGCG CCGCTTCGGTGGAAGAGCGGGTGTATCGCATGGAGGAAGGCGTTCGCCTG TGGGGTGGTACGTTCGTGCCGCCGGTAGAGCCAGCCCGGAGACTGGCGCT CATCGACAAGTGGTCCGGCAACGCGTGGCGAGCAAGAAGCAACACCAGCA GCAGCCAAGAGGTGAGTACGTTCGACTACAGGTCATCGGATGGTGGTGCG TGTGGCGTCATGATGCGTCGCTGCTCGATCCGCCGGGACGCGTCGCTGAC GTCTGTGGGATTGTTTGAGGTCCGGAAGTGCTAAGGCGATCGGCGGGCAA CACGTGATAGTGTGCGATTGAAGCCGGGCGCATGCGATAATGAAGGGGAG GGGAGGTCTCAGCGATCCTTGTCCACGCGGCACTCTTGGTTAGGGTGTAG TGGGACAACTTGCGGTCTAGGCGTCGACATTTCTCACGAAGGACGAGTAG TTGCGGTGCCTCAGTGTCCCCTGGAGGAGCGGTGCTCGGGGAGCGATGCT CGGTTTTACAAGCACCCTGGGGGCCAATTGATCAAAGCATGAGGTTCTAG GAGTTTGACCTTCAGCTATAGCCATATGGTTGTTTTTCACGTCCAACGAT CTACCCCCCTTCCCCACACAGGCAGTGGATAGAGATCGAAGTAACTACGA ACGCAGTGGCAAGAACGAGAACAAATGCAGGAACGAGAACCAAGCAACTC CGACTAGTCCTAAACCATTGTTCGGAAGTCAACTAGTAACGCCCCTGCAT CCCCCCCCCCCCCCCTTCACTCCCGTGACACACCAAGGGAGGGGGCGACG CAGACGACAATACACGTGGGGATGATGCCGGGCGGATTCTGTTCGTGATG ACGTCCTTCGATCGCGGAAGAAGGCTCGGTCCGTCCTTCAAGAAAGATAA GCTCGATTTCATCCTGTTGATGATGGATGAGATGAGGGAGGCTTGCGAGG TGAGCAGACAGCCTTCCTTGGTAGAAGTTCGGGATGCGGGGAATATTTGT ATTGGGTTAGCAAGGGTAGTTTGATTCGCTTCCGCGCGTCGAAGTTCCCG AGGACCGTGTGTCTGCAGTAGGCGAGCGCAAACCTTGCGGCCTAGATATG CACTGCTATTCCCTTGCTTGTCGGTGATTCCCAGCTTAGGCACAACGGTT CCTACCAGCATCTCGGAGTCCTTATGGTAAAAGCTCTGCATGAGAGAAGT TAACAGGCTTACGTCATGCCACGGGTTGCTGTCCTGCCTACGCTTTGATT GACTTGCGCGCTCGCTGTGCCTTTTGTTCCCGATCGCCGTGTGCACTCTA CCCGCATCTCCTCGCAACCAGGCCGGGTTTTCCCCGAACGTGCATCTGAT AGCGGCGTGGGAGCTCTCCGAGGTGGAAGTGTTTATCCGGGACCGTCTGT TCTGCCGCAGGACGGGCGGCCACGTCCCCTTCTCTCTAGAGGTACACCCT TCTTCGATTGGCAACGATCTGTCCATCAAGGTGAGAATCGACATGCAGCC ATCCATACATGACAACATATTGCATGGGACTCTGGCGTCGACACGGGCGC GACCATCTTGACGTTCACGTTCAAGCAGTGTCCGTGTCCGGCCGATTGTT CCCGTCCAATCGAGGCCGCCGATTGGAGACACGGCCAATGGAGCGATTGC GGAAAGCAGACAGCGTCTGGCAAGGACACGGGTACACGACGTTTTCAAAC AGTTTTGGTTCGTCCAAGGAGCGCCGGATAGATGATGTCGTGCGACTCGA AATGTTGCCACGTTGATCGCCCCCATCTCCCCCCCGGTCCTTGCCACGGT CTGCCTGGTGAAACTTGTGAGTCTGCTGCCTCATTTCACTTCTAAGGTCT ACAACTCCGTTGCGGACACAATATTCTTAAAGGATCAGACGCTGATTCCC ACTGCTGATGTCGTTTTGTCTCTTTGCAGCACCGAATCTTCATGAAACCG CGGCTGGAGGAATTTGACCTCTTCCTCCAGGTAAGCTGGAAGGGCAAGCT AGAGGAGAGTTTGCAGCACACCGTTCAGTGTGGCCGCGTCCTAACCGATG CGACCGGATCTTGCTCTGAATATGCAAGCCGAGCCTACTTGGGCTCCCTA CATAACCTTTCGACCAATTTTCAGTGATCTACGCAGCAAAATCAATTAAG CAAACATGTGGGATAACGTATTCAATCCGTGCTTTGGGGTTAGGGTTAGG GTGAGGGTTAGGATCTGCATGCCCCCTCCCTATTCTTTTTCTAGATGCCC TTAAAATCCTCCGTAGCCGGTTCCCATTTTTTGGAACCTGGAAATTCTCT TAGAACAAGGTATTTCTGTAATAGTGTTCGGATGAACCCCATCGCTACTG TAGGAGTGGTGGCAGAATCCGTTCAGTGGGATGACGCATGTGTGGGAACT TTCAGGAGTCGGACAGGCTCCTTCGGCGGCCTGGGGAGAGGTACCGGTTG CCTACATTTTCACTCGAATTCTGTTCGTCCGGCGGCGCAGGTCGAAGATG ACGTCATCGTGACCCTGAACCATATGCTGCTTTTCCGGGAAGAGAGCGAG CTGCTCGACGGTCGCAGGCATTCTGACGGAGCAACGCTGGCGAACACCGC CGTCCCGGGCTTCATCCGCGTGGAGCATGCCGCGGGGGAGGAGGGGACCA TCGTCGGGCCTTCGTCGGGAGAGGAATGGCAAGAGTGGGAAGTGATGCTC AGCAGGTAGGTGTGATCTCATCGGAAAGCAAATAATTATAACAGCCCGCA TTGTAGTTGCACGAGCAATCGCTCGTTCCTGCTCCGAGTCATGTGGTACT TTTTTCTGGACCTGAAGAAAGATTTGCAGAGCCAGATTAACCGTGTATAA AGATAGCTGCTTGGACTTACTATAGCGAAAACGGGGTCGTCGATGTCATC TAGAGAAACACTTTCCTCGAATGGTATTACCAAACAGATATTGTATGTCC CACACAATATTGTGAATTCCGTCATCATGTTGGACGTCCATGGCTCCCGC TCAGGCACCCCAAAACTCGAACCTAGCGTAGACAACCGCCTTCGAAACGC GAAGTAGGAGGCGATCCAGTCTTGGCGAGAGTATCGAGGAAGGCATGGAC AGCATCAATACGACCCGAAGGATGCACAACCGTCGTGCAATTTGTTCCTT CTCATCTGCTCTAAATGAACGGTGTTTTCACAAGGCTTCGTCCGGTCAAG CTTGAGGAGGCCGGAATTTACCTTACTCTCGGGCCGTCGCTACCGGTCCC ACGGGGCGGAAACAATCAGGTTCGTTATGTTTTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15164:196..3732+

>mRNA_Ecto-sp13_S_contig15164.3893.1 ID=mRNA_Ecto-sp13_S_contig15164.3893.1|Name=mRNA_Ecto-sp13_S_contig15164.3893.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15164:196..3732+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAAGGCGACAAGGGGGTGAACATCGACTCCGGGACACGGTCCGAGCATTT
CGGCGGCGCGCAGCGGCGGCACCAGCAGTGGCTGACGCGCCGCGCGGCAG
AGCTCCGGGACGAAGGGCCAGCGCTGCCCAGTTCGGCGTGGTCACACGCT
GGGAGACTTGCGAAGGGGACTTTCTCGAGAGGGGGAAGCCCGATACCGCC
CCCCCCCGGTGGGATTGCGGGCGCGGGGCCCCTGCCGACGGAGGGTGGCG
CCGCTTCGGTGGAAGAGCGGGTGTATCGCATGGAGGAAGGCGTTCGCCTG
TGGGGTGGTACGTTCGTGCCGCCGGTAGAGCCAGCCCGGAGACTGGCGCT
CATCGACAAGTGGTCCGGCAACGCGTGGCGAGCAAGAAGCAACACCAGCA
GCAGCCAAGAGGGAGGGGGCGACGCAGACGACAATACACGTGGGGATGAT
GCCGGGCGGATTCTGTTCGTGATGACGTCCTTCGATCGCGGAAGAAGGCT
CGGTCCGTCCTTCAAGAAAGATAAGCTCGATTTCATCCTGTTGATGATGG
ATGAGATGAGGGAGGCTTGCGAGGCCGGGTTTTCCCCGAACGTGCATCTG
ATAGCGGCGTGGGAGCTCTCCGAGGTGGAAGTGTTTATCCGGGACCGTCT
GTTCTGCCGCAGGACGGGCGGCCACGTCCCCTTCTCTCTAGAGGTACACC
CTTCTTCGATTGGCAACGATCTGTCCATCAAGCACCGAATCTTCATGAAA
CCGCGGCTGGAGGAATTTGACCTCTTCCTCCAGGTCGAAGATGACGTCAT
CGTGACCCTGAACCATATGCTGCTTTTCCGGGAAGAGAGCGAGCTGCTCG
ACGGTCGCAGGCATTCTGACGGAGCAACGCTGGCGAACACCGCCGTCCCG
GGCTTCATCCGCGTGGAGCATGCCGCGGGGGAGGAGGGGACCATCGTCGG
GCCTTCGTCGGGAGAGGAATGGCAAGAGTGGGAAGTGATGCTCAGCAGGC
TTCGTCCGGTCAAGCTTGAGGAGGCCGGAATTTACCTTACTCTCGGGCCG
TCGCTACCGGTCCCACGGGGCGGAAACAATCAGGTTCGTTATGTTTTCTA
G
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