mRNA_Ecto-sp13_S_contig1511.3861.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A6H5L960_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L960_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 5.130e-177 Identity = 261/279 (93.55%), Postives = 264/279 (94.62%), Query Frame = 1
Query: 1 MMSYSSTMTKAVLFLSAMSFLTADCFSTNFHVASAPVRVHHRVRTSSSAGPAPRLTMDTADVCRGEQSTPGWVRLAQRNLARVRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVLSGTDGGERGPRKGGLFEKLLGREVEARAAEAGASGSGGLL 837
MM SSTMTKAVLFLSAMSFLTADC+ TNFH+ASAPVRV H RTSSSAGPAPRLTMD ADVCRGEQSTPGWVRLAQ+N ARVRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCS VHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRM DTVELVSASAVEKVLSGTDGGERGPRKGGLFEKLLGREVE RAAEA GS GLL
Sbjct: 1 MMPCSSTMTKAVLFLSAMSFLTADCY-TNFHLASAPVRVRHSGRTSSSAGPAPRLTMDAADVCRGEQSTPGWVRLAQKNSARVRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSAVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMSDTVELVSASAVEKVLSGTDGGERGPRKGGLFEKLLGREVETRAAEAETLGSEGLL 278
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A5C7NUS9_9PROT (Glutathione-dependent peroxiredoxin n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NUS9_9PROT) HSP 1 Score: 150 bits (380), Expect = 5.280e-42 Identity = 82/159 (51.57%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVT--HTRMGDTVELVSASAVEKVL 717
++VGDR+P+ ++ +D DG+ + S D+F GKK VL +PGAFTPTCS HLP FV S + KG + VA +SVNDA+VM AW Q A+DKVLMLADGNGD S A+G+ +D +A GMG R R+ VV+DG V H E+ SA AV KVL
Sbjct: 3 IKVGDRIPNVTLKYMDKDGM-QTVSTNDLFQGKKVVLFALPGAFTPTCSAKHLPGFVTHSAAIREKGIDTVACLSVNDAFVMDAWGKQQNAEDKVLMLADGNGDFSKAVGLTMDGTAYGMGLRACRYAMVVDDGEVKALHVEAPGAFEVSSAEAVLKVL 160
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: UPI001908C81F (peroxiredoxin n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI001908C81F) HSP 1 Score: 150 bits (379), Expect = 7.460e-42 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVLS 720
++VGD LP++ +R+L DGI E + D FAG+K L+GVPGAFTP+CS HLP FV+K+ KG + +A +SVND +V+KAW DS D V++L+DGN DL+ +G+ D S G+G RCKRF +VEDGVVT + D+ V + +K+L+
Sbjct: 2 IKVGDALPEATLRKLGQDGI-DEVTTGDFFAGRKVALIGVPGAFTPSCSNEHLPGFVEKAKQFYDKGVDQIACMSVNDPFVLKAWGDSANVGDAVMLLSDGNADLTQKMGLEFDGSGAGLGTRCKRFAMLVEDGVVTALNVEDSPGSVEVTNADKLLA 158
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A835ZEG2_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG2_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.050e-41 Identity = 94/192 (48.96%), Postives = 116/192 (60.42%), Query Frame = 1
Query: 130 RTSSSAGPAPRLTMDTADVCRGEQSTPGWVRLAQRNLARVRVGDRLPDSIVRRLDD-DGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASA 702
RTSSS PR++ T E TP N A++ VGD++P ++ DG V + ++F GKK VL GVPGAFTPTCS HLP +V L AKG + VA +SVND +VMKAW +SQ KV+MLADGNG+LSAALG++ D S GMG RCKRF VV D VV H + DT L +SA
Sbjct: 36 RTSSS----PRMSAATT-----EAFTP-----LPENAAQIGVGDKIPSGTTVKIQGPDGSVAA-DVTELFKGKKVVLFGVPGAFTPTCSNNHLPGYVTHIDELKAKGVDTVACVSVNDIFVMKAWGESQSVSAKVVMLADGNGELSAALGLLTDKSGAGMGRRCKRFAMVVNDNVVKHIAV-DTKGLQDSSA 211
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A255XUS5_9PROT (Glutathione-dependent peroxiredoxin n=1 Tax=Elstera cyanobacteriorum TaxID=2022747 RepID=A0A255XUS5_9PROT) HSP 1 Score: 149 bits (376), Expect = 2.100e-41 Identity = 77/136 (56.62%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVV 654
V VGD++P ++ + +G KE S ++FAGKK VL G+PGAFTPTCS HLP F+DK LAAKG + +A ISVNDA+VM AW +Q+A DKVL+LADGN D + A+G+ D +A GMG R KRF V EDGVV
Sbjct: 3 VSVGDKIPLVTLKTMTAEG-PKEISTAEIFAGKKVVLFGLPGAFTPTCSAKHLPGFIDKHDDLAAKGVDTIACISVNDAFVMGAWGKAQEAGDKVLLLADGNADFAKAMGLDADFTAYGMGIRSKRFALVAEDGVV 137
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: K2N1G8_9HYPH (Glutathione-dependent peroxiredoxin n=1 Tax=Nitratireductor indicus C115 TaxID=1231190 RepID=K2N1G8_9HYPH) HSP 1 Score: 149 bits (376), Expect = 2.170e-41 Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVL 717
+ VGDR+P++ ++++D DG K+ S D FAG+K VL GVPGAFTPTCS HLP FV+ + AKG + VA ISVND +VMKAW A+DK+ L+DGNGD++ ALG+ +DLS G+G R KR+ +V++GVVT + + S ++L
Sbjct: 3 ISVGDRIPEASLKQVDTDG-AKDVSTNDFFAGRKVVLFGVPGAFTPTCSNNHLPGFVENRDAIGAKGIDDVAVISVNDHFVMKAWAGFTGAEDKITFLSDGNGDVTRALGLDIDLSKGGLGARSKRYSMIVDNGVVTAVNVEENPGEAVTSGAARIL 158
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: I5BTH2_9HYPH (Glutathione-dependent peroxiredoxin n=6 Tax=Phyllobacteriaceae TaxID=69277 RepID=I5BTH2_9HYPH) HSP 1 Score: 147 bits (372), Expect = 9.160e-41 Identity = 73/158 (46.20%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 244 RVRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVL 717
+V VGDR+PD+ +++ +G + + D FAG+K VL GVPGAFTPTCS HLP FV+ + A+GA+ +A ISVNDA+VMKAW A+DK+ +ADGNGD + ALG+ +DLS G+G R KR+ +V+DGVV+ + + S ++L
Sbjct: 2 KVSVGDRIPDTNFKKVSAEG-ANDVAAPDFFAGRKVVLFGVPGAFTPTCSNSHLPGFVENGDAIRARGADDIAVISVNDAFVMKAWAGFTGAEDKITFIADGNGDFTRALGLDIDLSVAGLGNRSKRYSMIVDDGVVSAINIEENPGQAETSGAARIL 158
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A2G1QNN1_9HYPH (Glutathione-dependent peroxiredoxin n=2 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A2G1QNN1_9HYPH) HSP 1 Score: 146 bits (369), Expect = 2.430e-40 Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVLS 720
+ GD+LPD+ DG K S +D+FA K VL GVPGAFTPTCS HLP F++ + AKG + +A ++VNDA+VMKAWED+ KDK+L LADG+G + A G+ +DL A G+G R KRF +V+DG V+ + D+ AS+ E +L+
Sbjct: 3 ISAGDKLPDATFTASTADGPAK-LSTQDIFADKTVVLFGVPGAFTPTCSMNHLPGFIEHHDAIKAKGVDTIAVVAVNDAFVMKAWEDATGGKDKILYLADGSGAFAKATGLDIDLGAAGLGVRSKRFSMIVKDGTVSALNIEDSPGKAEASSAEGILA 159
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A8K0E3T3_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0E3T3_9ROSA) HSP 1 Score: 147 bits (371), Expect = 9.130e-40 Identity = 77/163 (47.24%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 241 ARVRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQ--GMGPRCKRFLCVVEDGVVTHTRM--GDTVELVSASAVEKVL 717
A + VGD+LP+S + LDD G V+ ++ D+ GKK +L VPGAFTPTCS HLP FV+KS L +KG + +A ISVNDA+VMKAW+++ + D+VL+L+DGNGD + A+G +DLS + G+G R +R+ + EDG+V + G L A + KVL
Sbjct: 68 ATIAVGDKLPESTLSYLDDAGDVQTITVSDLTKGKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDTIACISVNDAFVMKAWKENIKVNDEVLLLSDGNGDFTRAIGCELDLSDKPVGLGVRSRRYALLAEDGIVKVLNLEEGGAFTLSGAEDMLKVL 230
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Match: A0A7Y2Z0G5_9GAMM (Glutathione-dependent peroxiredoxin n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2Z0G5_9GAMM) HSP 1 Score: 144 bits (364), Expect = 1.280e-39 Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 247 VRVGDRLPDSIVRRLDDDGIVKEFSIRDVFAGKKGVLVGVPGAFTPTCSTVHLPEFVDKSGVLAAKGAELVAFISVNDAYVMKAWEDSQQAKDKVLMLADGNGDLSAALGMMVDLSAQGMGPRCKRFLCVVEDGVVTHTRMGDTVELVSASAVEKVLS 720
++ GDR+P + + + + G + + D+F+GKK VLV VPGAFTPTCS HLP FVD++ + AKG + +AF SVND +VM AW S A++ +LMLADGNG+ +AALGM +D +A GMG R +RF + EDGVVT + + E S E VL+
Sbjct: 3 IKTGDRIPQATLTTMGEKG-PQALTTTDIFSGKKVVLVSVPGAFTPTCSARHLPGFVDQAAEILAKGVDTIAFFSVNDVFVMDAWGKSTNAEN-ILMLADGNGEFAAALGMELDATAFGMGHRSQRFALIAEDGVVTQLHLEEPGEF-RVSTAENVLT 157 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1511.3861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1511.3861.1 >prot_Ecto-sp13_S_contig1511.3861.1 ID=prot_Ecto-sp13_S_contig1511.3861.1|Name=mRNA_Ecto-sp13_S_contig1511.3861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp MMSYSSTMTKAVLFLSAMSFLTADCFSTNFHVASAPVRVHHRVRTSSSAGback to top mRNA from alignment at Ecto-sp13_S_contig1511:8861..12285+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1511.3861.1 ID=mRNA_Ecto-sp13_S_contig1511.3861.1|Name=mRNA_Ecto-sp13_S_contig1511.3861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3425bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1511:8861..12285+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1511:8861..12285+ >mRNA_Ecto-sp13_S_contig1511.3861.1 ID=mRNA_Ecto-sp13_S_contig1511.3861.1|Name=mRNA_Ecto-sp13_S_contig1511.3861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1511:8861..12285+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |