mRNA_Ecto-sp13_S_contig1510.3855.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI) HSP 1 Score: 954 bits (2467), Expect = 0.000e+0 Identity = 500/552 (90.58%), Postives = 515/552 (93.30%), Query Frame = 1
Query: 1 MNKSAFGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPT-KSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRGEREEEDQESIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPATHHALHLAKVRSRVETDSHVLVKAYRAYLLEEKARSAVSTVDKTGGSAAVQEQFSGGAKLAEDGPPMAHVKDKASRTNTYLS 1653
M+K+AFGIAYEPLRGSSQK YDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILA+ S+RTQADDFAEGDGTADITMRT QQGVPGGNGS+RQEDVN APFYP GLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQS K+ G R +SLTD AGILEFVGED+R YPVTEE XXXXXXXXXXX K+LVEVPEKMGTLNV GERE+E Q SIDEDE QRALVAKEWEAIDQLRTAERSVPMEKGVGG LQPISID ANRLVTTAEVLGYFRSQDLC HKAAIVPYQPPESRFGLFRRASKLRFPDAE+LRDEVFILAQIKY PADVVHRRLIQT+YRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLH LESQL FAMVLYRLS+ADVTGWPFMCVSIGFTKEAL V RRGGCYAECNRRGSVLDVVHELHQAQFHAFLEL RTEPATHHALHLAKVR+RVETDSHVLVKAYR YLLEEKARSAVS VDKTG SAAVQEQFSGG KLAEDGPP+AHVKD ASR NTYLS
Sbjct: 1 MDKNAFGIAYEPLRGSSQKSYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILATMSNRTQADDFAEGDGTADITMRT-QQGVPGGNGSERQEDVNSAPFYPDGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSAKEIGGRSIERSLTDNAAGILEFVGEDVRHYPVTEEEXXXXXXXXXXXXRKNLVEVPEKMGTLNVPGEREKEGQTSIDEDESAQRALVAKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVRARVETDSHVLVKAYRTYLLEEKARSAVSIVDKTGESAAVQEQFSGGGKLAEDGPPVAHVKDTASRKNTYLS 551
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA) HSP 1 Score: 247 bits (631), Expect = 9.090e-71 Identity = 180/503 (35.79%), Postives = 248/503 (49.30%), Query Frame = 1
Query: 16 FGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRGEREEEDQESIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFR-SQDLCAHKAAIVPYQPPESRFGLFRRAS--KLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRA--CPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRR--GSVLDVVHELHQAQFHAFLELSRTEPATHHALHLAKVRSRVETDSHVLVKAYRAYLLEE 1503
FGIAY+P G++Q+ Y +P GP F DE +FEQE+SAEF + G + DDF DGT T+ + R V A P ++ Q + D H N PQ+ + ++ + T +LT + ED+ P + D E PE + L +RGE E E + R +A EW+AID L+ AE G S + VT +E L R S L +H++AIVP + P GL +R + +L PDA+ RDE+F++ Q+ Y PA HRR++QTVYR +T A P+ G HWD +GFQG DPCTDLNRS GI +L QV+ LE++ + A L R S V GWP MCVSIGFTKEA+ RRG Y NR G +L+++ +HQAQFH F+ EP+ HHA+HL VR+ +E L+KA+ + +E
Sbjct: 102 FGIAYKPY-GAAQQAYVIPCGPLFSDERDFEQELSAEFAAALQTHSSGPVQ---------DDFDCDDGTVAANRETEWVAPQ----AVRTAAVVTAAAMPPMAAKRAADSQAQHSSDS-----VQHDTSTNGPQQQHEQLRSHCKTATNALTLA-------LQEDI--VPHGAPVLNAAAPDVMDNDSADAEEQPESLRAL-LRGETGEAAAELQETAATAARKQLAAEWQAIDTLQGAESLASF--ATPGTEPQFSYTCPS--VTLSEALMALRESGTLESHRSAIVPVELPS---GLLKRLAVPRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVRAAMEKSPEKLLKAFEQHCAKE 566
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.270e-34 Identity = 101/253 (39.92%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 700 EWEAIDQ-LRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRAS-------KLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPD-VGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF-LELSRTEPATHHALHL 1428
EW A+++ L A + G+ G L+ ++ RLVT EV R L I P PE R GL + L F RD F++A++KY PA H ++ +Y +T ACP VG HW+ VGFQG DP TDLNRS+G+ ++ Q L F+E + A ++RL+ T WPF+ VSI FTK AL R G YAECNRR V++V+H+ HQA FH + L+L+R EP T HL
Sbjct: 254 EWAAVERDLEMAPAADGSSVGLAGGLRA-PVNERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPE-RSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTR-EPGTDGITHL 499
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S2W6W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6W8_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.480e-31 Identity = 136/484 (28.10%), Postives = 206/484 (42.56%), Query Frame = 1
Query: 13 AFGIAYEPLRGSSQKIYDLP-SGPAFVDEDEFEQEMSAEFRVTVGPSRQG-EILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVR--------------GEREEEDQESIDEDEK----FQRALVAKEWEAIDQLRTAERSVPMEKGVGGML--QPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRA--------CPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLES-QLDFAMVLYRLSMADVTGW-PFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQ 1368
+FGI Y+P+ ++ LP + AF D+ +F QE+S EFR+ QG L ST S + D+F + T QG G R E V A + L + + + + + P + + E T+ + L+ + + + P ++ EG VP TL +R G+ +EE Q + E+E F R V +E A ++ A + GG + +R T AEV ++ A ++ P +LRF +A+ RD F++A + Y PAD VH R++QTV+ R+ + CP G HW+ +GFQG DP TD+NRSM A+ QVLH+ E+ + A + R D G FMC+SIGFT++AL RRG Y C ++ +LDVVH+ H AQ
Sbjct: 40 SFGIVYKPIIDPRKEPAPLPFASVAFQDQKDFVQELSPEFRLAAEGVAQGLGSLGSTGSGDEDDEFG-------VVEETDAQG--GTLHGVRTEAVKQA------MAQQEERVLSEFQEMQEQSCGSTEAEP------TVEGAHQSNEEDTQDMRSAGLNALKKMIRESQHAPEEDQQDAGSGIWETDAEGN---RVPAHATTLKMRAAPVSSLTIAEEGEGDEDEEGQGGMQENEDGADDFDREAV-EEQHAHQSMQRAGPASLSASSAGGTCSYEEAETMFRSRRWTEAEVSAIVTTEGFSKGLARLLGGPP------------RLRFENAKTERDLCFLIACVAYDPADDVHLRMLQTVFHRLMGHNVSSTGRPIDPCPVCGAHWEQIGFQGHDPRTDVNRSMKCLAVLQVLHWAETFPITAARLCRRCKEVDQFGANTFMCLSIGFTRDALQALRRGQSYYRCVQQRKILDVVHQCHHAQ 486
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A388KRF5_CHABU (ELMO domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KRF5_CHABU) HSP 1 Score: 133 bits (334), Expect = 8.520e-30 Identity = 84/256 (32.81%), Postives = 134/256 (52.34%), Query Frame = 1
Query: 655 SIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPI--------SIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQ--PPESRFGLFRR----ASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF 1380
SI + E+ +R A+EW+A+ +R A + G ++ P+ S ++ ++LV + LGY DL ++ ++IV PP FG R L R +VF A++ ++ D +HRR++ +VY R+T + R G HW+T+GFQG DP TDL R G+ AL Q+L+ +E + +YRLS+ G+P +SI TK AL R G E N++ SV++V+++ H+ FH F
Sbjct: 197 SIQDKEEAERIAHAREWDAV--MREAASAKISTTGQTVIISPLETVTTASDSREILSKLVVWKQALGYLAMLDLSSYMSSIVVESRPPPRGMFGFLWRFCLGVQTLMDEGLIEERKKVFCFAKMPFIDTDEMHRRMLFSVYVRLTGDVRPVSRRGDHWETIGFQGKDPATDL-RGCGMLALLQLLYEVEDNAENMGCIYRLSLDGTHGFPLSIISINITKWALESLRAGTLSKEINKQNSVVNVINQFHKGAFHDF 449
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A225WZI0_9STRA (ELMO domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZI0_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.750e-28 Identity = 135/499 (27.05%), Postives = 212/499 (42.48%), Query Frame = 1
Query: 10 SAFGIAYEPLRGSSQKI--------YDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFA---EGDGTADITMRTQQQGVPGGN---GSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRG--------------EREEEDQES---------------IDEDE---KFQRALV--AKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYF-RSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELH 1359
+ FGI+Y+ +R + + Y LPSGPAF DE EFE EM E + S G ++ + D+FA + DG DIT+ ++ G K++E+ N+ LK+ T + K +V +A + D+ V + SLT+ + +G+ +E + + ++PE + + ++ G E +EED E ID++ K ++ V + EW I ++ + P S V+ AE GY+ ++ D+ H+ IVP P +L FP A RD VF +A Y +V+ ++QT+YR++ R +G HW+ VGFQGTDP TDL R G+ +L Q+LH +ES D A + LS +PF C+ I T + + R G Y ECN+R SVL ++ LH
Sbjct: 353 ATFGISYQSMRKKTDEPHTDENVVKYSLPSGPAFPDEREFENEM--ELTSDLSFSVSGRNSSNPTENVDDDEFAFDVKRDG--DITVLSEDDLKAGRETLEAQKKKEEENLL------------NELKRATDEEKKLIERTNVME-SATKTEDEVV---ADPDALSLTELHSIYKRGLGD--------QEVLMDDGDEKETLKNSEASQIPEPIRSTSIMGRIFSQAQGAAETIAEGDEEDGEGETSPNTKGDVGKIAVIDDNNAEAKTEKNNVDESAEWREIKLVQHRQEDSPK----------FSNSPETASVSYAEAAGYYAKNPDVMQHRDVIVPEDFPSGACWKCLSRPRLTFPGAIDERDRVFCIAATAYDAQNVIVIGMLQTIYRKIMKSSRDVLLIGRHWEDVGFQGTDPSTDL-RGCGVLSLLQILHLVESYPDLAHRFHALSQHATRHFPFACMLINITLQCVVSLRSGALYVECNKRSSVLSAMNRLH 812
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A6P9A860_THRPL (ELMO domain-containing protein 3-like isoform X1 n=3 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9A860_THRPL) HSP 1 Score: 125 bits (315), Expect = 3.560e-28 Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 805 LVTTAEVLGYFRSQDLCAHKAAIVPYQPPESR---FGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQL--DFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQF-HAFL 1383
LVT E +F+ DL H I P F +F KLR P+ E RD VF +AQ + +H +++QT+Y+++T K CP G HW VGFQGTDP TD+ R +G+ + Q LH + S A +YR++ ++ +P +SI TK AL RRG ECN RG+V+DV++E + A F H FL
Sbjct: 86 LVTFQEAYEHFKKSDLTQHMKNIQPLMEKHGLSAVFSMFFGPPKLR-PNLEAERDTVFAIAQCQLEWDTPMHVQILQTIYKKLTGSKFDCPSNGNHWQDVGFQGTDPGTDV-RGVGMLGILQFLHLVVSPSLEPLARDIYRIARSERQNFPLAVMSINLTKIALDSMRRGQLNRECNNRGNVIDVLNEFYAAVFCHIFL 282
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A8C4FMD8_9TELE (ELMO domain containing 3 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4FMD8_9TELE) HSP 1 Score: 124 bits (311), Expect = 2.620e-27 Identity = 78/209 (37.32%), Postives = 108/209 (51.67%), Query Frame = 1
Query: 805 LVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFP-----DAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFL--ESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPAT 1410
L++ E L YF++ DLC I QP R GL L P D + RD VF +AQ VH R++QTVY+++T + CP GPHW+TVGFQG+DP TDL R G L VL+ + L A ++YRLS + +PF +SI T+ AL R ECNRR V+ V+++ + A F +L + + T
Sbjct: 115 LISFNEALQYFQTSDLCELLRNI---QPTVRRTGLAAITHFLFGPPRLHRDLVQERDLVFAIAQCSLDNKQEVHIRVLQTVYKKLTGSRADCPRFGPHWETVGFQGSDPATDL-RGTGFLGLMHVLYLVMDPETLPLARIIYRLSQHPIQNFPFSVMSINMTRIALHALREEVLCKECNRRQQVIGVINDFYVATFLHLYQLWKNQKKT 319
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.950e-27 Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1072 VGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF-LELSRTEPATHHALHL 1428
V HW+ VGFQG DP TDLNRS+G+ ++ Q L F+E + A ++RL+ T WPF+ VSI FTK AL R G YAECNRR V++V+H+ HQA FH + L+L+R EP T HL
Sbjct: 8 VASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTR-EPGTDGITHL 124
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: C3Y479_BRAFL (ELMO domain-containing protein n=11 Tax=Branchiostoma TaxID=7737 RepID=C3Y479_BRAFL) HSP 1 Score: 122 bits (305), Expect = 4.360e-27 Identity = 86/301 (28.57%), Postives = 146/301 (48.50%), Query Frame = 1
Query: 700 EWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFP-----DAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQ--LDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPAT--HHALHLAKVRSRVETDSHVLVKAYRAYLLEEKARSAVSTVDKTGGSAAVQEQFSG 1575
EW+A++ ++ G G S+ + L++ E L +F+++DL + I +P R G L P R+ VF + + + H R++QTVY+R+T K CP G HW+ +GFQG+DP TDL R G L QVL+F+ L A +Y+LS+ + +PF +SI T+ AL R G ECNRR ++ V+++ + A F ++ +++ T + V + V + +++ YL E++A +A+ +D G +A ++ F G
Sbjct: 33 EWDAVE---------TVQPGTG------SLQNQSSLISFNEALAFFQTKDLSEYMMKI---KPTVQRSGFTALCHWLFGPPRLQHSLHEERNLVFAMGLYPFDNTEETHMRVLQTVYKRLTGTKLDCPRYGGHWEQIGFQGSDPATDL-RGTGFLGLMQVLYFVMEPRTLSLARDIYKLSLHETQNFPFCVMSINITRIALQALREGNLSKECNRRQQIIAVINDFYVATFFHLYQIWKSQHKTIADSGYVIQDVTTFVNKNPRAVIRELERYLSEKRA-NAIGQMDSPRGVSAGKDSFVG 313 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1510.3855.1 >prot_Ecto-sp13_S_contig1510.3855.1 ID=prot_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp MNKSAFGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSback to top mRNA from alignment at Ecto-sp13_S_contig1510:10208..13763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1510.3855.1 ID=mRNA_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3556bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1510:10208..13763+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1510:10208..13763+ >mRNA_Ecto-sp13_S_contig1510.3855.1 ID=mRNA_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1510:10208..13763+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |