mRNA_Ecto-sp13_S_contig1510.3855.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1510.3855.1
Unique NamemRNA_Ecto-sp13_S_contig1510.3855.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI)

HSP 1 Score: 954 bits (2467), Expect = 0.000e+0
Identity = 500/552 (90.58%), Postives = 515/552 (93.30%), Query Frame = 1
Query:    1 MNKSAFGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPT-KSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRGEREEEDQESIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPATHHALHLAKVRSRVETDSHVLVKAYRAYLLEEKARSAVSTVDKTGGSAAVQEQFSGGAKLAEDGPPMAHVKDKASRTNTYLS 1653
            M+K+AFGIAYEPLRGSSQK YDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILA+ S+RTQADDFAEGDGTADITMRT QQGVPGGNGS+RQEDVN APFYP GLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQS K+ G R   +SLTD  AGILEFVGED+R YPVTEE XXXXXXXXXXX  K+LVEVPEKMGTLNV GERE+E Q SIDEDE  QRALVAKEWEAIDQLRTAERSVPMEKGVGG LQPISID ANRLVTTAEVLGYFRSQDLC HKAAIVPYQPPESRFGLFRRASKLRFPDAE+LRDEVFILAQIKY PADVVHRRLIQT+YRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLH LESQL FAMVLYRLS+ADVTGWPFMCVSIGFTKEAL V RRGGCYAECNRRGSVLDVVHELHQAQFHAFLEL RTEPATHHALHLAKVR+RVETDSHVLVKAYR YLLEEKARSAVS VDKTG SAAVQEQFSGG KLAEDGPP+AHVKD ASR NTYLS
Sbjct:    1 MDKNAFGIAYEPLRGSSQKSYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILATMSNRTQADDFAEGDGTADITMRT-QQGVPGGNGSERQEDVNSAPFYPDGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSAKEIGGRSIERSLTDNAAGILEFVGEDVRHYPVTEEEXXXXXXXXXXXXRKNLVEVPEKMGTLNVPGEREKEGQTSIDEDESAQRALVAKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVRARVETDSHVLVKAYRTYLLEEKARSAVSIVDKTGESAAVQEQFSGGGKLAEDGPPVAHVKDTASRKNTYLS 551          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA)

HSP 1 Score: 247 bits (631), Expect = 9.090e-71
Identity = 180/503 (35.79%), Postives = 248/503 (49.30%), Query Frame = 1
Query:   16 FGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRGEREEEDQESIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFR-SQDLCAHKAAIVPYQPPESRFGLFRRAS--KLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRA--CPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRR--GSVLDVVHELHQAQFHAFLELSRTEPATHHALHLAKVRSRVETDSHVLVKAYRAYLLEE 1503
            FGIAY+P  G++Q+ Y +P GP F DE +FEQE+SAEF   +     G +          DDF   DGT      T+         + R   V  A   P        ++  Q + D        H    N PQ+  + ++   +  T +LT         + ED+   P                +  D  E PE +  L +RGE  E   E  +      R  +A EW+AID L+ AE          G     S    +  VT +E L   R S  L +H++AIVP + P    GL +R +  +L  PDA+  RDE+F++ Q+ Y PA   HRR++QTVYR +T    A   P+ G HWD +GFQG DPCTDLNRS GI +L QV+  LE++ + A  L R S   V GWP MCVSIGFTKEA+   RRG  Y   NR   G +L+++  +HQAQFH F+     EP+ HHA+HL  VR+ +E     L+KA+  +  +E
Sbjct:  102 FGIAYKPY-GAAQQAYVIPCGPLFSDERDFEQELSAEFAAALQTHSSGPVQ---------DDFDCDDGTVAANRETEWVAPQ----AVRTAAVVTAAAMPPMAAKRAADSQAQHSSDS-----VQHDTSTNGPQQQHEQLRSHCKTATNALTLA-------LQEDI--VPHGAPVLNAAAPDVMDNDSADAEEQPESLRAL-LRGETGEAAAELQETAATAARKQLAAEWQAIDTLQGAESLASF--ATPGTEPQFSYTCPS--VTLSEALMALRESGTLESHRSAIVPVELPS---GLLKRLAVPRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVRAAMEKSPEKLLKAFEQHCAKE 566          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.270e-34
Identity = 101/253 (39.92%), Postives = 136/253 (53.75%), Query Frame = 1
Query:  700 EWEAIDQ-LRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRAS-------KLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPD-VGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF-LELSRTEPATHHALHL 1428
            EW A+++ L  A  +     G+ G L+   ++   RLVT  EV    R   L      I P   PE R GL    +        L F      RD  F++A++KY PA   H   ++ +Y  +T    ACP  VG HW+ VGFQG DP TDLNRS+G+ ++ Q L F+E +   A  ++RL+    T WPF+ VSI FTK AL   R G  YAECNRR  V++V+H+ HQA FH + L+L+R EP T    HL
Sbjct:  254 EWAAVERDLEMAPAADGSSVGLAGGLRA-PVNERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPE-RSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTR-EPGTDGITHL 499          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S2W6W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6W8_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.480e-31
Identity = 136/484 (28.10%), Postives = 206/484 (42.56%), Query Frame = 1
Query:   13 AFGIAYEPLRGSSQKIYDLP-SGPAFVDEDEFEQEMSAEFRVTVGPSRQG-EILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVR--------------GEREEEDQESIDEDEK----FQRALVAKEWEAIDQLRTAERSVPMEKGVGGML--QPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRA--------CPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLES-QLDFAMVLYRLSMADVTGW-PFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQ 1368
            +FGI Y+P+    ++   LP +  AF D+ +F QE+S EFR+      QG   L ST S  + D+F        +   T  QG  G     R E V  A      +       L +  +  + +  +    P        +   +  E  T+ +       L+ +  + +  P  ++            EG     VP    TL +R              G+ +EE Q  + E+E     F R  V +E  A   ++ A  +       GG    +       +R  T AEV     ++      A ++   P            +LRF +A+  RD  F++A + Y PAD VH R++QTV+ R+     +        CP  G HW+ +GFQG DP TD+NRSM   A+ QVLH+ E+  +  A +  R    D  G   FMC+SIGFT++AL   RRG  Y  C ++  +LDVVH+ H AQ
Sbjct:   40 SFGIVYKPIIDPRKEPAPLPFASVAFQDQKDFVQELSPEFRLAAEGVAQGLGSLGSTGSGDEDDEFG-------VVEETDAQG--GTLHGVRTEAVKQA------MAQQEERVLSEFQEMQEQSCGSTEAEP------TVEGAHQSNEEDTQDMRSAGLNALKKMIRESQHAPEEDQQDAGSGIWETDAEGN---RVPAHATTLKMRAAPVSSLTIAEEGEGDEDEEGQGGMQENEDGADDFDREAV-EEQHAHQSMQRAGPASLSASSAGGTCSYEEAETMFRSRRWTEAEVSAIVTTEGFSKGLARLLGGPP------------RLRFENAKTERDLCFLIACVAYDPADDVHLRMLQTVFHRLMGHNVSSTGRPIDPCPVCGAHWEQIGFQGHDPRTDVNRSMKCLAVLQVLHWAETFPITAARLCRRCKEVDQFGANTFMCLSIGFTRDALQALRRGQSYYRCVQQRKILDVVHQCHHAQ 486          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A388KRF5_CHABU (ELMO domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KRF5_CHABU)

HSP 1 Score: 133 bits (334), Expect = 8.520e-30
Identity = 84/256 (32.81%), Postives = 134/256 (52.34%), Query Frame = 1
Query:  655 SIDEDEKFQRALVAKEWEAIDQLRTAERSVPMEKGVGGMLQPI--------SIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQ--PPESRFGLFRR----ASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF 1380
            SI + E+ +R   A+EW+A+  +R A  +     G   ++ P+        S ++ ++LV   + LGY    DL ++ ++IV     PP   FG   R       L        R +VF  A++ ++  D +HRR++ +VY R+T + R     G HW+T+GFQG DP TDL R  G+ AL Q+L+ +E   +    +YRLS+    G+P   +SI  TK AL   R G    E N++ SV++V+++ H+  FH F
Sbjct:  197 SIQDKEEAERIAHAREWDAV--MREAASAKISTTGQTVIISPLETVTTASDSREILSKLVVWKQALGYLAMLDLSSYMSSIVVESRPPPRGMFGFLWRFCLGVQTLMDEGLIEERKKVFCFAKMPFIDTDEMHRRMLFSVYVRLTGDVRPVSRRGDHWETIGFQGKDPATDL-RGCGMLALLQLLYEVEDNAENMGCIYRLSLDGTHGFPLSIISINITKWALESLRAGTLSKEINKQNSVVNVINQFHKGAFHDF 449          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A225WZI0_9STRA (ELMO domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZI0_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.750e-28
Identity = 135/499 (27.05%), Postives = 212/499 (42.48%), Query Frame = 1
Query:   10 SAFGIAYEPLRGSSQKI--------YDLPSGPAFVDEDEFEQEMSAEFRVTVGPSRQGEILASTSSRTQADDFA---EGDGTADITMRTQQQGVPGGN---GSKRQEDVNIAPFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGERPTKSLTDGTAGILEFVGEDLRQYPVTEEXXXXXXXXXXXXEGKDLVEVPEKMGTLNVRG--------------EREEEDQES---------------IDEDE---KFQRALV--AKEWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYF-RSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELH 1359
            + FGI+Y+ +R  + +         Y LPSGPAF DE EFE EM  E    +  S  G   ++ +     D+FA   + DG  DIT+ ++     G       K++E+ N+               LK+ T + K      +V   +A +  D+ V    +    SLT+  +     +G+        +E            +  +  ++PE + + ++ G              E +EED E                ID++    K ++  V  + EW  I  ++  +   P            S       V+ AE  GY+ ++ D+  H+  IVP   P           +L FP A   RD VF +A   Y   +V+   ++QT+YR++    R    +G HW+ VGFQGTDP TDL R  G+ +L Q+LH +ES  D A   + LS      +PF C+ I  T + +   R G  Y ECN+R SVL  ++ LH
Sbjct:  353 ATFGISYQSMRKKTDEPHTDENVVKYSLPSGPAFPDEREFENEM--ELTSDLSFSVSGRNSSNPTENVDDDEFAFDVKRDG--DITVLSEDDLKAGRETLEAQKKKEEENLL------------NELKRATDEEKKLIERTNVME-SATKTEDEVV---ADPDALSLTELHSIYKRGLGD--------QEVLMDDGDEKETLKNSEASQIPEPIRSTSIMGRIFSQAQGAAETIAEGDEEDGEGETSPNTKGDVGKIAVIDDNNAEAKTEKNNVDESAEWREIKLVQHRQEDSPK----------FSNSPETASVSYAEAAGYYAKNPDVMQHRDVIVPEDFPSGACWKCLSRPRLTFPGAIDERDRVFCIAATAYDAQNVIVIGMLQTIYRKIMKSSRDVLLIGRHWEDVGFQGTDPSTDL-RGCGVLSLLQILHLVESYPDLAHRFHALSQHATRHFPFACMLINITLQCVVSLRSGALYVECNKRSSVLSAMNRLH 812          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A6P9A860_THRPL (ELMO domain-containing protein 3-like isoform X1 n=3 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9A860_THRPL)

HSP 1 Score: 125 bits (315), Expect = 3.560e-28
Identity = 77/199 (38.69%), Postives = 108/199 (54.27%), Query Frame = 1
Query:  805 LVTTAEVLGYFRSQDLCAHKAAIVPYQPPESR---FGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQL--DFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQF-HAFL 1383
            LVT  E   +F+  DL  H   I P          F +F    KLR P+ E  RD VF +AQ +      +H +++QT+Y+++T  K  CP  G HW  VGFQGTDP TD+ R +G+  + Q LH + S      A  +YR++ ++   +P   +SI  TK AL   RRG    ECN RG+V+DV++E + A F H FL
Sbjct:   86 LVTFQEAYEHFKKSDLTQHMKNIQPLMEKHGLSAVFSMFFGPPKLR-PNLEAERDTVFAIAQCQLEWDTPMHVQILQTIYKKLTGSKFDCPSNGNHWQDVGFQGTDPGTDV-RGVGMLGILQFLHLVVSPSLEPLARDIYRIARSERQNFPLAVMSINLTKIALDSMRRGQLNRECNNRGNVIDVLNEFYAAVFCHIFL 282          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A8C4FMD8_9TELE (ELMO domain containing 3 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4FMD8_9TELE)

HSP 1 Score: 124 bits (311), Expect = 2.620e-27
Identity = 78/209 (37.32%), Postives = 108/209 (51.67%), Query Frame = 1
Query:  805 LVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFP-----DAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFL--ESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPAT 1410
            L++  E L YF++ DLC     I   QP   R GL      L  P     D  + RD VF +AQ        VH R++QTVY+++T  +  CP  GPHW+TVGFQG+DP TDL R  G   L  VL+ +     L  A ++YRLS   +  +PF  +SI  T+ AL   R      ECNRR  V+ V+++ + A F    +L + +  T
Sbjct:  115 LISFNEALQYFQTSDLCELLRNI---QPTVRRTGLAAITHFLFGPPRLHRDLVQERDLVFAIAQCSLDNKQEVHIRVLQTVYKKLTGSRADCPRFGPHWETVGFQGSDPATDL-RGTGFLGLMHVLYLVMDPETLPLARIIYRLSQHPIQNFPFSVMSINMTRIALHALREEVLCKECNRRQQVIGVINDFYVATFLHLYQLWKNQKKT 319          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.950e-27
Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1072 VGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAF-LELSRTEPATHHALHL 1428
            V  HW+ VGFQG DP TDLNRS+G+ ++ Q L F+E +   A  ++RL+    T WPF+ VSI FTK AL   R G  YAECNRR  V++V+H+ HQA FH + L+L+R EP T    HL
Sbjct:    8 VASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTR-EPGTDGITHL 124          
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Match: C3Y479_BRAFL (ELMO domain-containing protein n=11 Tax=Branchiostoma TaxID=7737 RepID=C3Y479_BRAFL)

HSP 1 Score: 122 bits (305), Expect = 4.360e-27
Identity = 86/301 (28.57%), Postives = 146/301 (48.50%), Query Frame = 1
Query:  700 EWEAIDQLRTAERSVPMEKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESRFGLFRRASKLRFP-----DAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQ--LDFAMVLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELSRTEPAT--HHALHLAKVRSRVETDSHVLVKAYRAYLLEEKARSAVSTVDKTGGSAAVQEQFSG 1575
            EW+A++          ++ G G      S+   + L++  E L +F+++DL  +   I   +P   R G       L  P          R+ VF +    +   +  H R++QTVY+R+T  K  CP  G HW+ +GFQG+DP TDL R  G   L QVL+F+     L  A  +Y+LS+ +   +PF  +SI  T+ AL   R G    ECNRR  ++ V+++ + A F    ++ +++  T       +  V + V  +   +++    YL E++A +A+  +D   G +A ++ F G
Sbjct:   33 EWDAVE---------TVQPGTG------SLQNQSSLISFNEALAFFQTKDLSEYMMKI---KPTVQRSGFTALCHWLFGPPRLQHSLHEERNLVFAMGLYPFDNTEETHMRVLQTVYKRLTGTKLDCPRYGGHWEQIGFQGSDPATDL-RGTGFLGLMQVLYFVMEPRTLSLARDIYKLSLHETQNFPFCVMSINITRIALQALREGNLSKECNRRQQIIAVINDFYVATFFHLYQIWKSQHKTIADSGYVIQDVTTFVNKNPRAVIRELERYLSEKRA-NAIGQMDSPRGVSAGKDSFVG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1510.3855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS8_ECTSI0.000e+090.58RNA binding motif and ELMO/CED-12 domain n=1 Tax=E... [more]
A0A836CIH2_9STRA9.090e-7135.79ELMO/CED-12 family-domain-containing protein n=1 T... [more]
A0A7S1TTY8_9STRA2.270e-3439.92Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2W6W8_9STRA1.480e-3128.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A388KRF5_CHABU8.520e-3032.81ELMO domain-containing protein n=1 Tax=Chara braun... [more]
A0A225WZI0_9STRA2.750e-2827.05ELMO domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6P9A860_THRPL3.560e-2838.69ELMO domain-containing protein 3-like isoform X1 n... [more]
A0A8C4FMD8_9TELE2.620e-2737.32ELMO domain containing 3 n=2 Tax=Denticeps clupeoi... [more]
A0A7S1XMI1_9STRA2.950e-2750.83Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
C3Y479_BRAFL4.360e-2728.57ELMO domain-containing protein n=11 Tax=Branchiost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1510contigEcto-sp13_S_contig1510:10208..13763 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score957.2
Seed ortholog evalue3.3e-276
Seed eggNOG ortholog2880.D7FYS8
Preferred nameELMOD3
Model size1656
KEGG koko:K04139
KEGG Pathwayko04022,ko04080,map04022,map04080
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.ELMO domain-containing protein
EggNOG OGsKOG2998@1,KOG2998@2759
Ec32 ortholog descriptionRNA binding motif and ELMO/CED-12 domain
Ec32 orthologEc-19_002370.1
Cds size1656
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1510.3855.1prot_Ecto-sp13_S_contig1510.3855.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1510 10208..13763 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462804.19233-CDS-Ecto-sp13_S_contig1510:10207..104561681462804.19233-CDS-Ecto-sp13_S_contig1510:10207..10456Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 10208..10456 +
1681462804.2070248-CDS-Ecto-sp13_S_contig1510:10792..109391681462804.2070248-CDS-Ecto-sp13_S_contig1510:10792..10939Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 10793..10939 +
1681462804.2151937-CDS-Ecto-sp13_S_contig1510:11154..114781681462804.2151937-CDS-Ecto-sp13_S_contig1510:11154..11478Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 11155..11478 +
1681462804.2232344-CDS-Ecto-sp13_S_contig1510:11730..118561681462804.2232344-CDS-Ecto-sp13_S_contig1510:11730..11856Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 11731..11856 +
1681462804.2312942-CDS-Ecto-sp13_S_contig1510:12011..121461681462804.2312942-CDS-Ecto-sp13_S_contig1510:12011..12146Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 12012..12146 +
1681462804.2395313-CDS-Ecto-sp13_S_contig1510:12493..126731681462804.2395313-CDS-Ecto-sp13_S_contig1510:12493..12673Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 12494..12673 +
1681462804.2498808-CDS-Ecto-sp13_S_contig1510:12842..129531681462804.2498808-CDS-Ecto-sp13_S_contig1510:12842..12953Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 12843..12953 +
1681462804.2660096-CDS-Ecto-sp13_S_contig1510:13091..132531681462804.2660096-CDS-Ecto-sp13_S_contig1510:13091..13253Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 13092..13253 +
1681462804.275968-CDS-Ecto-sp13_S_contig1510:13541..137631681462804.275968-CDS-Ecto-sp13_S_contig1510:13541..13763Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1510 13542..13763 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1510.3855.1

>prot_Ecto-sp13_S_contig1510.3855.1 ID=prot_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp
MNKSAFGIAYEPLRGSSQKIYDLPSGPAFVDEDEFEQEMSAEFRVTVGPS
RQGEILASTSSRTQADDFAEGDGTADITMRTQQQGVPGGNGSKRQEDVNI
APFYPGGLRLDNREALKQLTKDYKVAGVAPHVHPGNAPQRLDQSVKKFGE
RPTKSLTDGTAGILEFVGEDLRQYPVTEEEDERAEEEEDDEEGKDLVEVP
EKMGTLNVRGEREEEDQESIDEDEKFQRALVAKEWEAIDQLRTAERSVPM
EKGVGGMLQPISIDLANRLVTTAEVLGYFRSQDLCAHKAAIVPYQPPESR
FGLFRRASKLRFPDAERLRDEVFILAQIKYVPADVVHRRLIQTVYRRMTN
EKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHFLESQLDFAM
VLYRLSMADVTGWPFMCVSIGFTKEALGVFRRGGCYAECNRRGSVLDVVH
ELHQAQFHAFLELSRTEPATHHALHLAKVRSRVETDSHVLVKAYRAYLLE
EKARSAVSTVDKTGGSAAVQEQFSGGAKLAEDGPPMAHVKDKASRTNTYL
S*
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mRNA from alignment at Ecto-sp13_S_contig1510:10208..13763+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1510.3855.1 ID=mRNA_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3556bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1510:10208..13763+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACAAGAGTGCGTTTGGCATCGCGTACGAGCCACTAAGGGGTTCTTC GCAGAAAATCTACGATTTGCCGTCCGGCCCGGCGTTCGTGGATGAGGATG AGTTCGAGCAAGAGATGAGTGCAGAGTTTCGGGTCACGGTCGGGCCATCT CGACAGGGTGAAATTCTAGCATCGACGTCCAGCAGAACGCAGGCCGATGA CTTCGCTGAAGGTGACGGTACGGCCGATATCACCATGAGGACACAGCAAG TGAGTTGTCGAGGAGAGGCCCATGCGCGTAACGTGAAACAACTTGATATT TCGCGCTGCCTTCGTCGAACCGAGCTCTTACGACGAGGAGGAAGGCACGA CTTTATATATGGCAGTCGTCGTCACCTTTGTCATCGAATGACTAGATACG TTCTCCCTGTCACTGCCCGCACCTACACGTACGTGAGGCTTGCCTTCTCT CCTTCGCCTGGATGTATTGTAGTGTGCAGCACCATTTCCTGCTCTACTTC CCCCTCTGTATCCCTCTCTATTGCCTTCTGGAATTCCTCGTCAAGCCCTT CATAGCATGCGTGTCGAACGTTGTTGAACGTTGAGCAGGGCGTACCGGGT GGGAATGGATCAAAGCGCCAAGAAGACGTCAATATCGCACCATTCTATCC AGGCGGATTGAGGCTGGACAACAGAGAGGCACTCAAGCAGCTTACAAAAG ACTACAAAGTAGCTGGAGTGGCCCCACATGTGGTACGAGAGGTGTCTCAT TGCTGTTGTCACCGAAAGTATAGAGATCTCAGGCGGTGCAACCAACAACC AGTTTTGTGAGGAGAGAAGAGGCTCCGGATTCTTCGGAACATTGCTCGCA TGGCTTGCACTACAGTCCGACTCAACAAAAATACTTTGATGTGCGACTTC GTTGTGACGGCCACTTTGCGAATGCTAACCGTTGCTTCGAACAATAGCAT CCCGGCAACGCACCACAACGCTTGGACCAATCTGTCAAAAAGTTTGGAGA AAGGCCCACCAAGAGCCTGACGGATGGTACTGCGGGCATTTTGGAATTCG TCGGTGAAGACCTCCGACAGTATCCAGTGACAGAAGAGGAGGACGAGCGA GCGGAGGAGGAGGAGGATGACGAAGAAGGGAAAGACCTTGTGGAAGTTCC AGAGAAGATGGGCACCCTGAATGTCCGGGGAGAAAGGGAGGAAGAGGACC AAGAAAGTATCGACGAGGATGAGAAATTCCAGCGCGCTCTTGTTGCTAAA GAATGGGAGGCTATCGATCAGGTTAGATTTGTTTTTTCGGGAAGTATCCT CGAGACCCCGCCTTTCCCGAACCCTCGGCAATGTCAGCCACCGCACGCTG CTTTCTGGCAACCACACAAAAAGTCCTTTGTCATCGTTTGAGTGAAGACC AGCATGTGATAGTCTTCAACCTTCCAAAGGACTTTGCACTACCACCGATA TGACCTCGTCGAAACTGCTAACCTTTGTCTCGACGGCATCCGCCTGGCGG GAACCGCCGGCATGCAACCTCAGTTGCGAACGGCGGAACGTTCTGTGCCA ATGGAGAAGGGAGTTGGTGGCATGTTGCAACCCATCAGCATCGACCTAGC TAATCGCCTCGTCACAACCGCAGAAGTGCTGGGCTACTTCCGTTCACAGG TATGTACTTCCGTCAGCACAGTTTTTAGAGCGATCCAGCCTACTCTACCG TGGAAGTATTTTGCAAGAACCGTTGAAGCCCTGACCGGATATGCTGAAAG CACACCGCTCTCAGTATCGGGGATTGACCATTGAAACATCAATAACCTTT CCAGGACTTGTGTGCGCACAAGGCAGCGATCGTGCCGTACCAGCCTCCCG AGAGTCGGTTTGGTCTGTTTCGCAGAGCCTCCAAGCTTAGGTTCCCTGAT GCAGAGCGGCTGCGGGATGAAGTGTTCATATTGGCACAGGTGACGAGACC CAACCCCATCCTATCGATGCATGCATTTCTAGGCGCCTTGCACGTACATG TTCGCCATTGATTGTTCCATCGATTCAACGATGTCGGTGTTGTTAGGCCC ATGTCTGCTTGAATCAGAACAGGAATCAAACGCAAGCGGTCTCCAAGCAA CAAGACAGGCTTATGTTGCCTTTGTTGGCAGGTGTTGCATGGTTGCCCAG CACAGGTTGGTGGGACCCATCGTCTCGACGGCGCCCAGATGGTGCCGAGA GCACGTTACCCGCCTAACCAACCTGCTTCCCCGATCTTCTTGTGGCAGCC AACCTAAGCTCGGTTCAATGCATGCGCCGACCGCAGATAAAATACGTTCC GGCCGATGTGGTACATCGTCGGTTGATCCAGACAGTTTATAGACGGATGA CGAACGAGAAGCGAGCTTGCCCGGACGTAGGCCCTCACTGGGACACTGTC GGCTTTCAGGGGACCGATCCTTGCACGGATTTGAACCGTTCGATGGGCAT TTTCGCACTGTTTCAGGTTTGTGAGGGAAAACACTGCTGTACGTATGTGG GGATTTGCTCGAATCGCGACCCGTTTGACGATGTACGTGACTGGTGAATG TCCGTAGTACTGGCAAAATGAAGAAAAACAGGTCGAATGACTTCCATGCG TGTTGCTCATTGACGGCGCTGAAACGGACCAACAGGTGCTTCATTTTCTG GAATCTCAGCTAGACTTTGCGATGGTCCTGTACCGTCTGTCTATGGCGGA TGTGACGGGCTGGCCGTTCATGTGCGTAAGCATCGGCTTCACCAAGGTAC GAGGCCGCCACCCGTGCACTTGTTGCGTGCTCGCCTAGACAATACCTGTA ACCTATCGTAGGGTGCAGTCGTCAGAATCCCTCATTGTTGCTGCTGTATC CTTGTCCTTGACCGAAAAAACACTTTATGCATAGGAGGCTCTGGGAGTCT TTCGACGAGGAGGCTGCTACGCTGAGTGCAACAGGCGGGGGAGCGTGCTG GATGTCGTGCACGAGCTCCATCAGGCGCAGTTCCATGCTTTCCTGGAGCT AAGCCGTACAGAACCGGCTACCCATCATGCCCTACATCTTGCCAAGGTAC ACAAAGTTGTTCACAGGTGTGAGATAGTCGACCGCTCGTCCTGTCTTGCT ACCACAATACCACGGTACCAGTGGGCGCGAGGTTGTCTCGGAGCACGTGA CAGCAACACCTAGACCTTGTAGAATCAAGCAGTGATCTACGATACGAGTC TATGGATTTACGGCAACGGCGAAAGATGTCTGTCTCAACGACGTACCCCA ACTGTTGCCATCCAGTCTCACACGTGACGCTAGTGTTCACAAAAAAAAAT CGCCATCGTCTTCTTCACCTCCACTACCATACAGGTTCGCTCGAGGGTAG AAACCGATTCCCACGTGCTGGTGAAGGCATACCGAGCATATCTCTTGGAG GAGAAGGCTCGGTCTGCCGTTAGTACTGTGGACAAGACGGGAGGGAGTGC GGCGGTACAAGAGCAATTCTCCGGTGGGGCGAAGCTAGCCGAAGATGGAC CGCCAATGGCACACGTGAAGGACAAAGCCAGTCGCACAAATACCTACCTG TCGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1510:10208..13763+

>mRNA_Ecto-sp13_S_contig1510.3855.1 ID=mRNA_Ecto-sp13_S_contig1510.3855.1|Name=mRNA_Ecto-sp13_S_contig1510.3855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1510:10208..13763+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACAAGAGTGCGTTTGGCATCGCGTACGAGCCACTAAGGGGTTCTTC
GCAGAAAATCTACGATTTGCCGTCCGGCCCGGCGTTCGTGGATGAGGATG
AGTTCGAGCAAGAGATGAGTGCAGAGTTTCGGGTCACGGTCGGGCCATCT
CGACAGGGTGAAATTCTAGCATCGACGTCCAGCAGAACGCAGGCCGATGA
CTTCGCTGAAGGTGACGGTACGGCCGATATCACCATGAGGACACAGCAAC
AGGGCGTACCGGGTGGGAATGGATCAAAGCGCCAAGAAGACGTCAATATC
GCACCATTCTATCCAGGCGGATTGAGGCTGGACAACAGAGAGGCACTCAA
GCAGCTTACAAAAGACTACAAAGTAGCTGGAGTGGCCCCACATGTGCATC
CCGGCAACGCACCACAACGCTTGGACCAATCTGTCAAAAAGTTTGGAGAA
AGGCCCACCAAGAGCCTGACGGATGGTACTGCGGGCATTTTGGAATTCGT
CGGTGAAGACCTCCGACAGTATCCAGTGACAGAAGAGGAGGACGAGCGAG
CGGAGGAGGAGGAGGATGACGAAGAAGGGAAAGACCTTGTGGAAGTTCCA
GAGAAGATGGGCACCCTGAATGTCCGGGGAGAAAGGGAGGAAGAGGACCA
AGAAAGTATCGACGAGGATGAGAAATTCCAGCGCGCTCTTGTTGCTAAAG
AATGGGAGGCTATCGATCAGTTGCGAACGGCGGAACGTTCTGTGCCAATG
GAGAAGGGAGTTGGTGGCATGTTGCAACCCATCAGCATCGACCTAGCTAA
TCGCCTCGTCACAACCGCAGAAGTGCTGGGCTACTTCCGTTCACAGGACT
TGTGTGCGCACAAGGCAGCGATCGTGCCGTACCAGCCTCCCGAGAGTCGG
TTTGGTCTGTTTCGCAGAGCCTCCAAGCTTAGGTTCCCTGATGCAGAGCG
GCTGCGGGATGAAGTGTTCATATTGGCACAGATAAAATACGTTCCGGCCG
ATGTGGTACATCGTCGGTTGATCCAGACAGTTTATAGACGGATGACGAAC
GAGAAGCGAGCTTGCCCGGACGTAGGCCCTCACTGGGACACTGTCGGCTT
TCAGGGGACCGATCCTTGCACGGATTTGAACCGTTCGATGGGCATTTTCG
CACTGTTTCAGGTGCTTCATTTTCTGGAATCTCAGCTAGACTTTGCGATG
GTCCTGTACCGTCTGTCTATGGCGGATGTGACGGGCTGGCCGTTCATGTG
CGTAAGCATCGGCTTCACCAAGGAGGCTCTGGGAGTCTTTCGACGAGGAG
GCTGCTACGCTGAGTGCAACAGGCGGGGGAGCGTGCTGGATGTCGTGCAC
GAGCTCCATCAGGCGCAGTTCCATGCTTTCCTGGAGCTAAGCCGTACAGA
ACCGGCTACCCATCATGCCCTACATCTTGCCAAGGTTCGCTCGAGGGTAG
AAACCGATTCCCACGTGCTGGTGAAGGCATACCGAGCATATCTCTTGGAG
GAGAAGGCTCGGTCTGCCGTTAGTACTGTGGACAAGACGGGAGGGAGTGC
GGCGGTACAAGAGCAATTCTCCGGTGGGGCGAAGCTAGCCGAAGATGGAC
CGCCAATGGCACACGTGAAGGACAAAGCCAGTCGCACAAATACCTACCTG
TCGTAA
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