mRNA_Ecto-sp13_S_contig15094.3848.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15094.3848.1
Unique NamemRNA_Ecto-sp13_S_contig15094.3848.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: D7FVV6_ECTSI (Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV6_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 8.730e-60
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 339
            LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA
Sbjct:  162 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 274
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A835Z1F2_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.040e-41
Identity = 88/114 (77.19%), Postives = 98/114 (85.96%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGSNMLLGLNTA 339
            LI+DDVSITHLTFG EFTKAIENKQVAQQEAERQVY+V  S+QER AA+IRAEGEAEAA+LIS ALK SG GLIEVRRID AKEIA TLA  R +TYLP G GG+NMLL ++ +
Sbjct:  162 LILDDVSITHLTFGREFTKAIENKQVAQQEAERQVYLVQKSEQERQAAVIRAEGEAEAADLISNALKSSGSGLIEVRRIDAAKEIAETLANGRGVTYLPAGQGGANMLLSVDPS 275
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S0LM87_9EUKA (Prohibitin n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LM87_9EUKA)

HSP 1 Score: 149 bits (376), Expect = 3.770e-39
Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGSNMLLGL 330
            LI+DDVSITHLTFG EF KAIE+KQVAQQEAE Q Y+VA SDQER AA+IRAEGEAEAA LIS A+  +G GLIEVRRIDTAKE+A  +A SRNITYLP+  GGSNMLL +
Sbjct:   41 LILDDVSITHLTFGREFAKAIEHKQVAQQEAETQAYMVARSDQERKAAVIRAEGEAEAAILISKAMASAGNGLIEVRRIDTAKEVAHIVANSRNITYLPSSKGGSNMLLNV 151
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: F0Y523_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y523_AURAN)

HSP 1 Score: 151 bits (382), Expect = 1.740e-38
Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGG---GSNMLLGLNT 336
            LI+DDVSITHL FG EFT AIE KQVAQQEAERQ YVVA ++QE+ AAIIRAEGEAEAA  IS AL++ G GLIEVRRID A+E+A TL+ +R +TYLP+GG   GSNMLLGLNT
Sbjct:  162 LILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLNT 276
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S2XWM3_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM3_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.100e-38
Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLP--TGGGSNMLLGLN 333
            LI+DDVSITHLTFG E+ KAIE+KQVAQQEAERQ YVVA +DQER AAIIRAEGEAEAA LIS AL  SG GLIEVRRID A+E+A  LA +R +TYLP   GGG N+LLGLN
Sbjct:  163 LILDDVSITHLTFGREYAKAIESKQVAQQEAERQQYVVAKADQERKAAIIRAEGEAEAATLISKALAGSGSGLIEVRRIDAAREVAENLAAARGVTYLPGGQGGGQNILLGLN 275
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S2HUT8_9STRA (Prohibitin n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HUT8_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.070e-37
Identity = 84/115 (73.04%), Postives = 95/115 (82.61%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPT--GGGSNMLLGLNTA 339
            L +DDVSITHL +G EFT AIE KQVAQQEAERQ +VVA +DQER AAIIRAEGE+EAA +++ AL++ G GLIEVRRIDTAKEIA  LA SRNITYLP   GGG+ MLLGLN A
Sbjct:  172 LTLDDVSITHLVYGKEFTNAIEQKQVAQQEAERQHWVVAKADQERQAAIIRAEGESEAATIVTKALQDCGSGLIEVRRIDTAKEIAGMLAQSRNITYLPNTGGGGAQMLLGLNNA 286
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S3M2D1_9STRA (Prohibitin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2D1_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.180e-36
Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGSNMLLGL 330
            LI+DDVSITHLTFG EF +AIE+KQVAQQEAE Q YVVA +DQER AA+IRAEGEAEAA LIS A+ ++G GLIEVRRIDTAK++A  ++ SRNITYLP+  GGSNMLL +
Sbjct:  162 LILDDVSITHLTFGKEFARAIEHKQVAQQEAETQAYVVAKADQERKAAVIRAEGEAEAANLISEAMLKAGNGLIEVRRIDTAKDVAQIVSRSRNITYLPSSKGGSNMLLNV 272
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A482STV8_9ARCH (Prohibitin family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STV8_9ARCH)

HSP 1 Score: 143 bits (360), Expect = 1.900e-36
Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGSNMLLGL 330
            LI+DDVSITHLTFG EF KAIE+KQVAQQEAE Q Y+VA +DQER AA+IRAEGEAEAAELIS A+  +G G IEVRRIDTAK++A  L+   N+ YLP G GGSNMLL +
Sbjct:   74 LILDDVSITHLTFGKEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAVIRAEGEAEAAELISKAMATAGNGFIEVRRIDTAKDVAQILSRGNNVVYLPGGKGGSNMLLNV 184
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S4E3P4_9STRA (Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.160e-35
Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGG---GSNMLLGLN 333
            +I+DDVSITHL FG EF+ AIE KQVAQQEAERQ Y+VA ++QE+ A++IRAEGEA AAE+IS AL+E G GLIEVRRID AKE+A +L+ +R +TYLP+GG   GSN+LLGL+
Sbjct:  162 IILDDVSITHLVFGKEFSGAIEQKQVAQQEAERQTYIVAKAEQEKKASVIRAEGEAAAAEIISRALEECGTGLIEVRRIDAAKEVAESLSRARGVTYLPSGGQGGGSNLLLGLS 275
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BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Match: A0A7S0T017_9STRA (Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T017_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.130e-34
Identity = 79/112 (70.54%), Postives = 90/112 (80.36%), Query Frame = 1 
Query:    1 LIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGSNMLLGLN 333
            LI+DDVSITHLTFG EF KAIE+KQVAQQEAE Q Y+VA +DQER AAII AEGEAEAA +IS A+  +G GL+EVRRID AKE+A TLA  RN+ YLP G  GSN LL L+
Sbjct:  162 LILDDVSITHLTFGTEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAIILAEGEAEAANMISKAMSAAGNGLVEVRRIDAAKEVAGTLAKGRNVIYLPNGKDGSNFLLSLD 273
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15094.3848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV6_ECTSI8.730e-60100.00Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A835Z1F2_9STRA3.040e-4177.19Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S0LM87_9EUKA3.770e-3975.68Prohibitin n=1 Tax=Coccolithus braarudii TaxID=221... [more]
F0Y523_AURAN1.740e-3873.04Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
A0A7S2XWM3_9STRA3.100e-3875.22Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A7S2HUT8_9STRA2.070e-3773.04Prohibitin n=1 Tax=Dictyocha speculum TaxID=35687 ... [more]
A0A7S3M2D1_9STRA1.180e-3672.97Prohibitin n=1 Tax=Spumella elongata TaxID=89044 R... [more]
A0A482STV8_9ARCH1.900e-3671.17Prohibitin family protein n=1 Tax=archaeon TaxID=1... [more]
A0A7S4E3P4_9STRA1.160e-3567.54Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35... [more]
A0A7S0T017_9STRA2.130e-3470.54Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15094contigEcto-sp13_S_contig15094:2..2232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score205.3
Seed ortholog evalue1.5e-50
Seed eggNOG ortholog2880.D7FVV6
Preferred namePHB
Model size1561
KEGG koko:K09228,ko:K17080
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000122,GO:0000302,GO:0000981,GO:0001067,GO:0001302,GO:0001541,GO:0001552,GO:0001558,GO:0001664,GO:0001666,GO:0001846,GO:0001848,GO:0001850,GO:0001851,GO:0001932,GO:0001933,GO:0001934,GO:0002082,GO:0002673,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002920,GO:0002922,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006139,GO:0006140,GO:0006259,GO:0006325,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006950,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008150,GO:0008152,GO:0008277,GO:0008285,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009505,GO:0009507,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010944,GO:0010954,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019866,GO:0019867,GO:0019898,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030061,GO:0030154,GO:0030162,GO:0030308,GO:0030312,GO:0030421,GO:0030449,GO:0030518,GO:0030522,GO:0030964,GO:0031090,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031312,GO:0031315,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031347,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031647,GO:0031871,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033143,GO:0033144,GO:0033554,GO:0033993,GO:0034097,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0035601,GO:0035632,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043434,GO:0043467,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045271,GO:0045471,GO:0045745,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045917,GO:0045926,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046483,GO:0046545,GO:0046660,GO:0046677,GO:0048232,GO:0048308,GO:0048311,GO:0048364,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050727,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050847,GO:0050896,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051302,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051716,GO:0051782,GO:0055085,GO:0060255,GO:0060259,GO:0060548,GO:0060765,GO:0060766,GO:0061024,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070372,GO:0070373,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070613,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071383,GO:0071396,GO:0071407,GO:0071453,GO:0071456,GO:0071495,GO:0071704,GO:0071731,GO:0071840,GO:0071897,GO:0071944,GO:0072511,GO:0080090,GO:0080134,GO:0090304,GO:0090696,GO:0097159,GO:0097305,GO:0097366,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098732,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0099402,GO:0140110,GO:1900542,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1903317,GO:1903319,GO:1903506,GO:1903507,GO:1903508,GO:1903578,GO:1903998,GO:1990204,GO:2000112,GO:2000113,GO:2000257,GO:2000259,GO:2000322,GO:2000323,GO:2001141
Exons2
EggNOG free text desc.prohibitin
EggNOG OGsCOG0330@1,KOG3083@2759
Cds size336
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03029,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462803.4399464-UTR-Ecto-sp13_S_contig15094:1..71681462803.4399464-UTR-Ecto-sp13_S_contig15094:1..7Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15094 2..7 +
1681462803.4905505-UTR-Ecto-sp13_S_contig15094:1013..22321681462803.4905505-UTR-Ecto-sp13_S_contig15094:1013..2232Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15094 1014..2232 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462803.4634223-CDS-Ecto-sp13_S_contig15094:7..761681462803.4634223-CDS-Ecto-sp13_S_contig15094:7..76Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15094 8..76 +
1681462803.4790668-CDS-Ecto-sp13_S_contig15094:746..10131681462803.4790668-CDS-Ecto-sp13_S_contig15094:746..1013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15094 747..1013 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15094.3848.1prot_Ecto-sp13_S_contig15094.3848.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15094 8..1013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15094.3848.1

>prot_Ecto-sp13_S_contig15094.3848.1 ID=prot_Ecto-sp13_S_contig15094.3848.1|Name=mRNA_Ecto-sp13_S_contig15094.3848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
MDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRA
EGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGG
GSNMLLGLNTA*
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mRNA from alignment at Ecto-sp13_S_contig15094:2..2232+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15094.3848.1 ID=mRNA_Ecto-sp13_S_contig15094.3848.1|Name=mRNA_Ecto-sp13_S_contig15094.3848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15094:2..2232+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTCATCATGGACGACGTGTCCATCACCCACCTCACCTTCGGCCACGAGTT
CACGAAGGCCATCGAGAACAAGCAGGTGTGTTGTTGTTGTCTTCACATGA
AGAAACCCTTCCGGTCTCCTCTCAGCACCTCCTAATATCCGCTCTGGTCC
AACTGACGCGCACGCCTTCCGTGGTCACAAGCCGACTGCCCAAAGAAAGG
GATACACCTTTCTAAAAATCAAAATGATATTAAAAATGGACCCCAGGAGA
GTCCTCCAAGACGCGATTTGCTAACCAAACGAGTATTCGTGATAATCGAC
GACCTTGTAATGTGAAGATGTTGGCTATGATGTTCCTTTGCATCTGTCCG
ACTTTCTTTTCGTTTCCATGATTTTCTTTGTGCACGAAATGTTTTTTCAT
GTAGCAATTCTTGTCTTTGTACAAATCGGGGGAGGGGCGGTGTAAGTGCA
AGTCACTTCTTGTGCCACCGCCATTCGTTGAAATGTCTATCAGAGATTCA
AGCTGTTGGTACGATTCGACATTTAGACCATTTCTTTCTGATTGACTCAA
GACTGAAAATTAAGCTGCTACGATTCAACGTGCACAACAAGGCAGTATTG
CCCCTTCCGTTCCTGTAGACTAGTTCGTGCTGCTTGTTACACAAGATCGA
CTTTGAAGCTGCTGCTCCTAAATTCAACGTCACACAAAACCGAAACTTCG
CAATGCACGGTACGATTCAACTTTCACGCGCAACCAACACCGCAGGTGGC
GCAACAAGAGGCCGAGCGGCAGGTGTACGTGGTCGCGCTGTCCGACCAGG
AGAGGCTGGCGGCCATCATCCGCGCGGAGGGAGAGGCGGAGGCCGCCGAG
CTGATCTCGGCCGCCCTGAAGGAGAGCGGCATCGGGCTCATCGAGGTGCG
GCGCATCGACACCGCCAAGGAGATCGCCCTCACCCTCGCCACCTCGCGAA
ACATCACCTACCTGCCAACAGGGGGCGGGTCCAACATGCTCCTGGGTCTC
AACACTGCTTGAGGAAGGGCAAGGTGGTGATGATAGGAGTAGATTGAAAT
TCGCTTTAATATTTCAAAATGATTGCCTCGCATGATGTTAGCCGGAAGGT
GGTGCCTGCTGCTGCTGGTGTTTTTTGACCGCCGTGCAGGGTTGATTGAT
TAGAGGTGCGCGTTTTGTCTTTGCGGAGGGCGGGAATGCTGTGCCCGCTC
CATTTCATGTATCGTGCTGCCGTGCGAGGAAGGATGATCGGCAGCGGATG
GGGTTCGGAGAGCGTCGCTAGTCTCAACGGTAGGGGGTAGTTGGACTGAT
GAGATAGGGAGAGCAAGCCTCGGGGCTTTGATCAAGCGACGAACGACCTT
GTCACGGGGGCATTTGCCGTGCAGCGTACCAATCACGGTTGTTTGTCGTG
TTAATCGTGTTCTGCGTAGAGCCCTAGTTCAGGCCGGGGCGTCCCTTGCT
CTTGATACTTCTAGTTTTCTTGCGCCCTACCTATCCAGATGCTCGACGCA
CTTGGCGTCGTCACATGACCCCCAGTAAAACACGCTATGACAGCCAACGT
GTTGCGGCGTCACGTGGGCCCAGCTGTTAAGAGGGCCGCCCTCGCAGGCG
TACGCGTCCGTTGCCGCATACGATGTAGAGCAGCGTCGTGAGGTGCTCTC
TCGGCACTTGTAACGTGTTGGAAGCCTCGCGGGAAATTTTTGTCGAACGA
AGGCGCGTGTACACGTCCGAGAGAATGGGGTACTTTTTTTGCCGCCGAGG
ACCGAACGTCGTGCCTGAACGTTCCCGACAAGACGGCGATGCCGCCTTGT
TGATGGATACCAAAACTTCGTGGTGACGCGTCCCCTGCAGGGTCGAGATG
AGTTGGGTCCACCAACACTAGAGCCGCAAAAGTGCCCGGCGCTCTCATGA
TATCGAGAGCTCAAAGAGGGCTGGTTTCCTCCGACGAGACGAGTTGGTTG
GTGGTTGTCCAAAGAGAGGACCGTGTGCGCCAAGAAGCCATTGCACAAGG
TGTCGGACACGACTCCGACCATGAGCATCATCCCCTCCTGTCGCTGGTCC
TCCTCCTGCTGCGGCGATACCGCCGCCGTGCGCCCGACCGTTTTAATTTT
GTCTCGGCTGGTGTTGACCCGGATCGTGGTGTTCACGTCGAGCTGTGTGG
CGATCGGCTGGTACCGATTGCCGGGGGCGGCGGCACACACTAAACTACAC
TTGTTATTTTGCCTACTGAAGCGCCTTCCGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15094:2..2232+

>mRNA_Ecto-sp13_S_contig15094.3848.1 ID=mRNA_Ecto-sp13_S_contig15094.3848.1|Name=mRNA_Ecto-sp13_S_contig15094.3848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=336bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15094:2..2232+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGACGTGTCCATCACCCACCTCACCTTCGGCCACGAGTTCACGAA
GGCCATCGAGAACAAGCAGGTGGCGCAACAAGAGGCCGAGCGGCAGGTGT
ACGTGGTCGCGCTGTCCGACCAGGAGAGGCTGGCGGCCATCATCCGCGCG
GAGGGAGAGGCGGAGGCCGCCGAGCTGATCTCGGCCGCCCTGAAGGAGAG
CGGCATCGGGCTCATCGAGGTGCGGCGCATCGACACCGCCAAGGAGATCG
CCCTCACCCTCGCCACCTCGCGAAACATCACCTACCTGCCAACAGGGGGC
GGGTCCAACATGCTCCTGGGTCTCAACACTGCTTGA
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