mRNA_Ecto-sp13_S_contig1509.3847.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1509.3847.1
Unique NamemRNA_Ecto-sp13_S_contig1509.3847.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 5.880e-111
Identity = 198/295 (67.12%), Postives = 217/295 (73.56%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGGGAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPP-----GTEDRDERAPAA------------NGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRA-SPVLPSGFLLDPVTVRGRPLAAGDRVRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTARE 832
            QVH+VFK+YARGT LRVGLAIGQTNFLEEQL+LVG VAL GNP ATARASFLR+QGR + P+PT GG  L+   W+G GAPAGGSSEVDIVVATPGRLLDH+ QTPGFTLQHLRYL+IDEADRLLNQSYQGWV KVIKAAYR+EPG A PVYER + N    R       G ED D R                NG+++ S ++                 GKRPR  S   PS F LDPVTVRGRPLA G+R+RGATVSTPPLRKLLF ATLTNNPQKLAGLDVVNPLIYTA E
Sbjct:  268 QVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQ----------QLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATE 552          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.090e-55
Identity = 145/283 (51.24%), Postives = 161/283 (56.89%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGGGAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGK------AGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVRGRPLAAGDRVRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTARE 832
            QVH VF  Y  GT LRVGLAIGQ+N L+EQLSLVG  AL  +PVA ARA      G    P     G    G        P GG SEVDI+VATPGRLLDH+ QTPGFTLQHL YLV+DEADRLLNQSYQ WV +V++AAYR   G       + P+   + A                A                XXXXXXXXXXXXXX               + P TVRGRP AA  RV G   +T PLRKLLF ATLTNNPQKLA L + NP+ YTARE
Sbjct:  138 QVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWVGGKSGGLRAPPA---GAFARG---MSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVTCGSSSSPISNPSVA----------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE 398          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A7S4QRG8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRG8_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.570e-33
Identity = 112/295 (37.97%), Postives = 142/295 (48.14%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEGNPVATARASFLRSQGR-HMGPDPTKGGLILE-----GDVWTGG---GAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANS-NDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVR--GRPLAAGDR--------VRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTA 826
            QV+ VF RY +G+DL VGLAIGQ +F  EQ SLV    L  +      +S+     +     DP      LE      D+         P  G S VD++VATPGRL+DHI +TPGFTLQHLR+LVIDEADRL+NQSYQ W+ +V++AA       A   ++    +  ND    G         A     T+SDR                             +  +LDP+T R  G    + D         V  A   T PLRKLLF ATLT +PQKLA L +VNP  + A
Sbjct:   35 QVYNVFDRYTQGSDLCVGLAIGQKDFATEQKSLV----LGDDNAGLCSSSYDHDTAQIQYALDPINTHSALEIFDYDADINVTSKKCSLPRAGRSAVDVLVATPGRLMDHIEKTPGFTLQHLRFLVIDEADRLVNQSYQNWIGRVMRAA------SAASAFDSCGDSGVNDNNKDGHS-------AVTRLETASDR-----------------------------TSLILDPITWRKGGMDGTSFDTNATNTASFVPAAVCQTVPLRKLLFSATLTKDPQKLASLGLVNPKHFDA 283          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.670e-29
Identity = 105/297 (35.35%), Postives = 139/297 (46.80%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEG-NPVATARASF------LRSQGRHMGPD-PTKGGLILEGDVWTGGG---------APAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVRGRPLAAGDRVRGATVSTP-----PLRKLLFPATLTNNPQKLAGLDVVNPLIYTA 826
            QV  VF+RY++G+DL +GLAIGQT+F  EQ SL+    + G  P    R  +      +++  +    D P     +  G  W  G           P GG S VD++V TPGRL+DH+ +TPGFTLQHLR+L+ DEADRL+NQ YQ W+++V++AA       AGP                  DR     + N  S    +                                 LDPVT R R + A D     T  T       LRKLLF ATLT +P+KLA L +VNP  + A
Sbjct:  268 QVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA------SAGP------------------DR-----SLNMDSCGLQK---------------------------------LDPVTWR-RGIDANDSNHANTQDTNVCRSVQLRKLLFSATLTKDPRKLASLGLVNPKYFDA 501          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A7R9YBX1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.370e-28
Identity = 101/300 (33.67%), Postives = 132/300 (44.00%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIG---------------QTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGG--------GAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVRGRPLAAGDRVRGATVS-TPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTAR 829
            QV+ V  RY +G D+ +GLA G                 +F  EQ  L G VA +  P  T     L       G  P    L+  G   TG             GG S VD++VATPGRL+ H+  TPGFTLQHL +LV+DEADRLL+QSYQ WV++V+ A+  + P                                   S S+D                    K PR    L     ++PV +RG   AA     G   S  PPLR++LF AT+T +PQKLA LD+  P+++T R
Sbjct:  192 QVYGVMLRYTQGLDIEIGLATGGGKVDPAAAAESRSGAGDFEMEQRRLTGCVASDAPP-PTGGFGILGPGEPEDGTKPNPSALLPGGFPGTGSLLRGPIRRTLGPGGRSRVDVLVATPGRLMSHLDYTPGFTLQHLEFLVVDEADRLLSQSYQNWVQRVLHASAMQAP----------------------------------ESFSAD--------------------KTPRR---LGDRVKIEPVRIRGAGTAAQGSSGGRPRSLAPPLRRMLFSATMTRDPQKLAHLDLFYPMMFTVR 433          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.480e-27
Identity = 97/292 (33.22%), Postives = 134/292 (45.89%), Query Frame = 2
Query:    2 QVHTVFKRYARGT--DLRVGLAIGQTNFLEEQLSLVGAVALE---GNPVATARASFLRSQGRHMGPDPTKGGLILEGDV------WTGGGA----PAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVRGRPLAAGDRVRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTARE 832
            QV+ VF  Y++G+  DLR+GLAIGQT+F  EQ  L+   + E   GN     + S L      +  D  +  L  + D+      W    A    PAGG S VD++V TPGRL+DH+  TPGFTLQHLR+LVIDEADRLL+QSY GW+++V+   +   P       E  +     +  P T  R E +    G     D +                                           ++   V         LRKLL+ ATLT +PQKL+ L ++NP  + A +
Sbjct:  280 QVYEVFDAYSKGSKNDLRIGLAIGQTDFKAEQKKLIFGDSDENEDGNNWTRLQNS-LDPGNLELALDAMREQLENDNDIGDETKDWKSNNAKSKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVHA-PPAPTSRTAEYKTDEGTISIDPVTHRRSENSSFVTGIGPEKDNQ------------------------------------------SSSDVGVHSNICQRIQLRKLLYSATLTKDPQKLSALRLINPKYFNAHD 527          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN)

HSP 1 Score: 117 bits (293), Expect = 4.580e-26
Identity = 63/141 (44.68%), Postives = 85/141 (60.28%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGGGAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAY 424
            QVH +  ++   T LR GLAIGQ+NF  EQ +LVG+   + +     +    R+  + M  D                    GG S+VDI+VATPGRL+DH+ QTPGFTLQHL++LV+DEADRLLNQSYQ W+ K+  + +
Sbjct:  117 QVHQIVSQFCESTPLRCGLAIGQSNFAAEQQTLVGSDGRQPH-----QHGISRTTSKSMAVD--------------------GGDSKVDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKIYASIF 232          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A7S2M677_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M677_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.010e-26
Identity = 106/312 (33.97%), Postives = 148/312 (47.44%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTN----FLEEQLSLVGAVALEG-NPVATARASFLR-----------SQGRHMGPDPTKGGLILE---GDVWTGGGAP----AGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVR----GRPLAAGDR----------VRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTA 826
            QV+ VF RYA+G+D+++GLA+G  N       E+ SLV     E  + + T   + LR           ++ RH   +PT  G  L+   G + +  G       GG S VDI+V TPGRL+DH+ +TPGFTLQHL+YLV+DEADRL+NQ YQ WV +VI+A+       +  V+  + A+                     TS S+                     K P       + F++DP+T R    G  +  GD           V      +  LRK+LF ATLT +PQKLA L +VNP  + A
Sbjct:   21 QVYDVFVRYAKGSDIKIGLAVGGGNKKGDLANERRSLVVETYNEAIHEIRTDDGALLRRKVGGLYESASARLRHSF-EPTSLGKALDAYDGTLKSDSGPQIFPKVGGRSAVDILVCTPGRLMDHL-ETPGFTLQHLKYLVVDEADRLVNQPYQNWVGRVIEAS------NSSNVFNSSVADH--------------------TSLSA-------------------YVKSPLQVAPDENTFIIDPITHRSAGSGLGMLHGDNSTPNEDDAGLVGDFLGQSVHLRKMLFSATLTQDPQKLARLGLVNPKHFDA 285          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: B8BZV2_THAPS (Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZV2_THAPS)

HSP 1 Score: 114 bits (285), Expect = 3.020e-25
Identity = 95/281 (33.81%), Postives = 127/281 (45.20%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIG----QTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGGGAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKAAYRREPGKAGPVYERTSANSNDTRPPGTEDRDERAPAANGTSTSSDRRWQKXXXXXXXXXXXXXXGKRPRASPVLPSGFLLDPVTVRGRPLAAGDRVRGATVSTPPLRKLLFPATLTNNPQKLAGLDVVNPLIYTARE 832
            QVH VF RYA+G+ L++GLA+G    +++ + E+ SLV   A +G    T R    R  G  + P+                    GG S VDI+VATPGRL+DH+  TPGFTLQHLR+LVIDEADRL+NQ YQ WV +V++A                                         S SS+R                  G++ +A+                     G+ V G      PLRK+LF ATLT +PQKLA L + NP  + A +
Sbjct:   73 QVHDVFVRYAKGSHLKIGLAVGGGKKKSDLVYERRSLV---AYDG----TTR----RDNGIQVFPE-------------------FGGQSAVDILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEA-----------------------------------------SNSSNR--------FGSSVPVVRHGEKDQAN-------------------TGGELVSGMFGRPVPLRKMLFSATLTQDPQKLAVLGLKNPKHFDANQ 255          
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Match: A0A058YZR3_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058YZR3_FONAL)

HSP 1 Score: 115 bits (287), Expect = 4.040e-25
Identity = 66/139 (47.48%), Postives = 82/139 (58.99%), Query Frame = 2
Query:    2 QVHTVFKRYARGTDLRVGLAIGQTNFLEEQLSLVGAVALEGNPVATARASFLRSQGRHMGPDPTKGGLILEGDVWTGGGAPAGGSSEVDIVVATPGRLLDHIAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVKKVIKA 418
            Q+H VF R   GTDLRVGLA G  +   EQ S+V       +P  +A      + G   GP                 G  AGG S +DI+V TPGRL+DH+AQTPGFTLQHLR+LVIDEADRL+N SY  W+ +V++A
Sbjct:  294 QIHQVFSRLIAGTDLRVGLAAGIRSLSAEQASMV-------HPALSAFQPEDDAPGHVAGP-----------------GRLAGGHSALDILVCTPGRLMDHLAQTPGFTLQHLRFLVIDEADRLMNDSYHNWLPRVLEA 408          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1509.3847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI5.880e-11167.12DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA2.090e-5551.24DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4QRG8_9STRA8.570e-3337.97Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3V688_9STRA3.670e-2935.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9YBX1_9STRA4.370e-2833.67Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A448ZLR2_9STRA9.480e-2733.22Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A2D4BV54_PYTIN4.580e-2644.68DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]
A0A7S2M677_9STRA8.010e-2633.97Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B8BZV2_THAPS3.020e-2533.81Atp-dependent RNA helicase n=1 Tax=Thalassiosira p... [more]
A0A058YZR3_FONAL4.040e-2547.48Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1509contigEcto-sp13_S_contig1509:14135..16583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size840
Hectar predicted targeting categoryother localisation
Exons4
Cds size840
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462803.3761806-CDS-Ecto-sp13_S_contig1509:14134..142561681462803.3761806-CDS-Ecto-sp13_S_contig1509:14134..14256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1509 14135..14256 +
1681462803.3883936-CDS-Ecto-sp13_S_contig1509:14550..146901681462803.3883936-CDS-Ecto-sp13_S_contig1509:14550..14690Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1509 14551..14690 +
1681462803.3979292-CDS-Ecto-sp13_S_contig1509:15496..156601681462803.3979292-CDS-Ecto-sp13_S_contig1509:15496..15660Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1509 15497..15660 +
1681462803.4074597-CDS-Ecto-sp13_S_contig1509:16169..165831681462803.4074597-CDS-Ecto-sp13_S_contig1509:16169..16583Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1509 16170..16583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1509.3847.1prot_Ecto-sp13_S_contig1509.3847.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1509 14135..16583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1509.3847.1

>prot_Ecto-sp13_S_contig1509.3847.1 ID=prot_Ecto-sp13_S_contig1509.3847.1|Name=mRNA_Ecto-sp13_S_contig1509.3847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
AGSYRVQEVRERHRSPGRVGHRPDELPRGAAVARRGCRSRRKSGRNRPSE
LSEVARPSHGTGPNQRRPDPGRGCVDRRGGAGGRIVRGGHRRGNTWKTAG
PYRADPGVHAAALAVPRDRRSGPAAEPKLPGLGEEGHQGGLPERTGKGGS
GLRTHLGQLQRHPPPWHGRQRRACPGRQRHQHEQRQKMAETGAAAGTTGT
GGRYREAPSRVTRPSLRVLARPCDGARAASGGGGPCPGGDRLYPAPPEAL
VPGYSHQQPPEAGGSGRGEPAHLHREGKDE
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mRNA from alignment at Ecto-sp13_S_contig1509:14135..16583+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1509.3847.1 ID=mRNA_Ecto-sp13_S_contig1509.3847.1|Name=mRNA_Ecto-sp13_S_contig1509.3847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1509:14135..16583+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGGTTCATACCGTGTTCAAGAGGTACGCGAGAGGCACCGATCTCCGGG TCGGGTTGGCCATAGGCCAGACGAACTTCCTCGAGGAGCAGCTGTCGCTC GTCGGGGCTGTCGCTCTAGAAGGTGAGATTGCAGAGAGCGTGGATGGCTT GTTTGTATGGGTGGTACTAGGTATTTGTCGTTTCTTCCTGAGCACTCATT TGGTGTAGTAGGTGTGCGTCTTCTTTCCGCTGGGTAAAGCAAAAGAAAGC AAGCTCCACAACCGAAGCCCAACCGCGGCTTTCGCGAAGGCGACTGCAAC TCCTACGGGGTTGGAAGTCTCCGAACCTCGCATCTCTGCGTGCTTTCTCA CACGGTTTGACCCTTTGCGCTTGGCACCCACACCTGTCCTGGACTCTCAA AACAAAACGCGACCAGGAAATCCGGTCGCAACCGCCCGAGCGAGCTTTCT GAGGTCGCAAGGCCGTCACATGGGACCGGACCCAACCAAAGGCGGCCTGA TCCTGGAAGGGGATGTGTGGACAGGCGGGGGGGCGCCGGCGGGCGGATCG TCCGAGGTGCGCGCTTGCAATCGTTTATTTTGTTAGTCTTCTGAAAGTTG GCGCGCGGGAAAAACGGAAGTAATGGGACCCGCATTAATTTCTTGGCGTT GCCTGAAACCAAGGTCTTGGACAAGCGTAGGGGGGGTATCGTTCTCGCCA CGCAGTTTTTAGCTGTCCTTTAGTTGTGTTGTACTTTGACGGTGGGTGTT GTCACCCCGCCTAGTTTTGCGTCCCACGTAGGCTTTGCGTACGTTATGAC CACGGGGACGAAGAGCGCGACCCAGTCCGAAAGCTGCCTGGCCTACGATG AAATTGTCAACGGAGACGAGTTTCCCTGTGACTGGCAAGGCCTCACTGGC ACCCCAATTTCCACCATTCGAGTGTTTGGATCCAGCTGAATGGCTTCATG GATAGCGGTGGGAAGAGGGCTTTCTTTGCATGAGAGCAAACTTACGCGTC CCGCTGATAGCTCATCCAAACCTTTTTTTTTCAATTCGACCAGGGCTAGC CAGAGATGATTCTTACCTCTCCTCACAGAGGTTGCTCCAGAGATTAACTC TTGGGTTTTCCCCTGAAAATGCCGGACCGTTTTTTCTTGGGAGGCTCCTT TCTCGCTGCGTGGGTGTTCGGGCCTTCCAGCTCTCCCAGCGAAAAGCAAC CATGCGGCGAAAGTTGTCGAGCCCCTCCAATTCCGCGAGATATAAAGCCC TACATGAGAGGGTCAGCGTTCTTTTCCAACCTACTCACCATCCCGCTTTT TGTCCTGTGCTCTATGCTCTACCTCCGTCCCCTCGGCTCATGTTGCCATT TTGATATGTAAGGTGGACATCGTCGTGGCAACACCTGGAAGACTGCTGGA CCATATCGCGCAGACCCCGGGGTTCACGCTGCAGCACTTGCGGTACCTCG TGATCGACGAAGCGGACCGGCTGCTGAACCAAAGCTACCAGGGCTGGGTG AAGAAGGTCATCAAGGCGGCTTACCGGTGTGTGTTTCTACCAAATATTCT GGATAATACTGAGGTTTTTTGTTTTGCGAATGCCCCAGTACTTTTGCCGA AGCTTGTGGGTAGTTGGCGGGTTTCCTTTGTGAGCGCCGTCCCGCTTCCG TGGCTCCGCTGGTTCTGCGACCGAGAGATAGGCGCATTATGCCCTTGTTT CATGTACCCAACGCTGCTACAAGGATGCCGCAGTATCGTCGTGACCCCCA GTTCCATGTCTCGATCATTCACCTATGATATGTCGGCAGGGGCACATCAG TCATCTGGCAATCATGCTGGTATACGCTGTTCGGCATGCGCATACGACAT GCGGTGTGGTGCCAGTCTTGCGTATCACACCGTAGTAGTAGAGAACTCCC GGAACCGTCGTCCCACGAAACTCCCAGCACCCAGATGATTCTAAATGAGT CCGATCTGTGGCTATCCTGAGACACTCCCTCACGGTGCCGTTTCTTCGCC CTCCGGGGGCAAACCTCTGTCTCTGGCATTTGCAGGAGAGAACCGGGAAA GGCGGGTCCGGTCTACGAACGCACCTCGGCCAACTCCAACGACACCCGCC CCCCTGGCACGGAAGACAGAGACGAGCGTGCCCCGGCCGCCAACGGCACC AGCACGAGCAGCGACAGAAGATGGCAGAAACAGGAGCAGCAGCGGGAACA ACAGGGACGGGGGGTCGGTATCGGGAAGCGCCCTCGCGCGTCACCCGTCC TTCCCTCCGGGTTCTTGCTCGACCCTGTGACGGTGCGAGGGCGGCCTCTG GCGGCGGGGGACCGTGTCCGGGGGGCGACCGTCTCTACCCCGCCCCTCCG GAAGCTCTTGTTCCCGGCTACTCTCACCAACAACCCCCAGAAGCTGGCGG GTCTGGACGTGGTGAACCCGCTCATCTACACCGCGAGGGAAAAGACGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1509:14135..16583+

>mRNA_Ecto-sp13_S_contig1509.3847.1 ID=mRNA_Ecto-sp13_S_contig1509.3847.1|Name=mRNA_Ecto-sp13_S_contig1509.3847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1509:14135..16583+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGGTTCATACCGTGTTCAAGAGGTACGCGAGAGGCACCGATCTCCGGG
TCGGGTTGGCCATAGGCCAGACGAACTTCCTCGAGGAGCAGCTGTCGCTC
GTCGGGGCTGTCGCTCTAGAAGGAAATCCGGTCGCAACCGCCCGAGCGAG
CTTTCTGAGGTCGCAAGGCCGTCACATGGGACCGGACCCAACCAAAGGCG
GCCTGATCCTGGAAGGGGATGTGTGGACAGGCGGGGGGGCGCCGGCGGGC
GGATCGTCCGAGGTGGACATCGTCGTGGCAACACCTGGAAGACTGCTGGA
CCATATCGCGCAGACCCCGGGGTTCACGCTGCAGCACTTGCGGTACCTCG
TGATCGACGAAGCGGACCGGCTGCTGAACCAAAGCTACCAGGGCTGGGTG
AAGAAGGTCATCAAGGCGGCTTACCGGAGAGAACCGGGAAAGGCGGGTCC
GGTCTACGAACGCACCTCGGCCAACTCCAACGACACCCGCCCCCCTGGCA
CGGAAGACAGAGACGAGCGTGCCCCGGCCGCCAACGGCACCAGCACGAGC
AGCGACAGAAGATGGCAGAAACAGGAGCAGCAGCGGGAACAACAGGGACG
GGGGGTCGGTATCGGGAAGCGCCCTCGCGCGTCACCCGTCCTTCCCTCCG
GGTTCTTGCTCGACCCTGTGACGGTGCGAGGGCGGCCTCTGGCGGCGGGG
GACCGTGTCCGGGGGGCGACCGTCTCTACCCCGCCCCTCCGGAAGCTCTT
GTTCCCGGCTACTCTCACCAACAACCCCCAGAAGCTGGCGGGTCTGGACG
TGGTGAACCCGCTCATCTACACCGCGAGGGAAAAGACGAG
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