mRNA_Ecto-sp13_S_contig15087.3844.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: D8LJR5_ECTSI (Elongator complex protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJR5_ECTSI) HSP 1 Score: 347 bits (889), Expect = 1.320e-114 Identity = 171/180 (95.00%), Postives = 174/180 (96.67%), Query Frame = 1
Query: 1 MAPPQVTEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIEKRFIIFRRREKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANRCGESGRMDLRER 540
MAPPQVTEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIEKRFIIFRR+EKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANRCG + R+R
Sbjct: 1 MAPPQVTEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIEKRFIIFRRKEKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANRCGFDAVLQFRDR 180
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A836CEU0_9STRA (Elongator complex protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU0_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.640e-55 Identity = 98/181 (54.14%), Postives = 126/181 (69.61%), Query Frame = 1
Query: 1 MAPPQV-TEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIEKRFIIFRRREKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANRCGESGRMDLRER 540
M PP + T+ + DIE+LV D HE+ MPAL++LL+++ + WK+ K FR+ KF P KNV+ H++ + ++ L++ L++K VRS+SGVL+VT+LTSP+P Y P G KR VQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGV RANRCG R+R
Sbjct: 1 MGPPSLSTKTPMSNPVTDIEALVMDEQHENNMPALRKLLDDMDGMTDWKDANKLLKQFRKVHKFTPTKNVLNHIHRSSGKKSATLDRLLITKQVRSMSGVLVVTLLTSPHPSYTDPVTG----KRHVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVLRANRCGFDSVTQFRDR 177
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A314VRQ0_9RHOB (tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A314VRQ0_9RHOB) HSP 1 Score: 111 bits (278), Expect = 2.140e-25 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 166 IFRRREKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRAN 501
+FRR+ K +K + Y +++N+ + K +RS SGVL+VTV TS P Y R K+K+Q+FSCKHNCYYCP+EPAHEGNN+V QPRSYL EPGV RAN
Sbjct: 3 MFRRKHKVELRKMDLVCSYKNLKLKNNKFYGLITKKAMRSQSGVLVVTVFTSATPTY----TDKRTGKKKIQKFSCKHNCYYCPSEPAHEGNNWVAQPRSYLTKEPGVLRAN 110
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A8K1C3V4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3V4_PYTOL) HSP 1 Score: 107 bits (268), Expect = 6.730e-24 Identity = 65/126 (51.59%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 142 KEIEKRFIIFRRREKFVPKKNVVYHLYMAQEVRNDA-----LEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANR 504
+E+EK F+ RR+ K +PKKN + +Y + DA LEK LV K +S SGVL+VTVLTSPYP+ KVQRFSC+ NCYYCPNEP QPRSYLHDEP V RANR
Sbjct: 112 RELEKAFVKLRRQFKCLPKKNQMKFVYNMLVQQGDAPAGMMLEKLLVKKAQKSQSGVLVVTVLTSPYPKVG----------DKVQRFSCQWNCYYCPNEPG--------QPRSYLHDEPSVLRANR 219
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A2D4C8G5_PYTIN (Elongator complex protein 3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8G5_PYTIN) HSP 1 Score: 106 bits (264), Expect = 2.320e-23 Identity = 66/126 (52.38%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 142 KEIEKRFIIFRRREKFVPKKN---VVYHLYMAQ--EVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANR 504
+E+EK FI RR+ K +PKKN VY++ + Q ALEK LV K +S SGVL++TVLTSPYP KVQRFSC+ NCYYCPNEP QPRSYLHDEP V RANR
Sbjct: 110 RELEKAFIKLRRQFKCLPKKNQMKFVYNMLVQQGEAPAGMALEKMLVKKAQKSQSGVLVITVLTSPYPRVG----------DKVQRFSCQWNCYYCPNEPG--------QPRSYLHDEPSVLRANR 217
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A6C0LP42_9ZZZZ (N-acetyltransferase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LP42_9ZZZZ) HSP 1 Score: 103 bits (257), Expect = 1.860e-22 Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 217 LYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEY-DVPGAGGRPAKRKV---QRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRAN 501
+Y + N L + K +S SGVL++TVLTS YPEY D G + ++ K+ RFSCKH+C YCPNEPAHEGNN+V QPRSYL+ EP V RAN
Sbjct: 74 IYKYLHLDNQQLRNLITKKKCKSNSGVLVITVLTSAYPEYIDEDGEAKQVSEVKLAKHSRFSCKHDCAYCPNEPAHEGNNWVAQPRSYLYSEPAVLRAN 172
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A3M6VJ63_9STRA (Elongator complex protein 3 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ63_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.000e-22 Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 91 MPALKELLNEILPL--RSWKEIEKRFIIFRRREKFVPKKN---VVYHLYMAQEVRND--ALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANR 504
+P +E+++ ++ L ++ +++EK F++ RR K +PKK+ V L + + V ALEK L+ K +S SGVL+VTVLTSPYP GG K QRFSC+ NCYYCPNEP QPRSYLHDEP V RANR
Sbjct: 104 LPKFEEMVHFLVALDPQTARDLEKAFVLLRREFKCLPKKSQMKFVLGLLVQKGVVPSGLALEKLLIKKAQKSQSGVLVVTVLTSPYP-----AVGG-----KKQRFSCQWNCYYCPNEPD--------QPRSYLHDEPSVLRANR 230
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A7S0DD97_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DD97_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 1.020e-21 Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 1
Query: 91 MPALKELLNEILPLRSWKEIEKRFIIFRRREKFVPKKNVVYHLYMAQEVR-----NDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRANR 504
+P + +L + P K + + R+ PKK + ++Y + N LE+ L++K VRSLSGVL++TV TSPYP+Y K+QRFSCKHNCYYCPNEP PRSYL +EPGVRR R
Sbjct: 70 VPFVYDLAATVYP--DQKAVNAAYFAMRKVHSIGPKKPQINYVYRILRNKGKVPYNPELERFLIAKGVRSLSGVLVITVFTSPYPKYG----------NKIQRFSCKHNCYYCPNEPG--------LPRSYLSNEPGVRRGKR 192
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A6C0L9W7_9ZZZZ (N-acetyltransferase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0L9W7_9ZZZZ) HSP 1 Score: 101 bits (251), Expect = 1.220e-21 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 103 KELLNEILPLRSWKEIEKRFIIFRRREKFVPKKNVVYHLYMAQEVRNDALEKALVSKHVRSLSGVLIVTVLTSPYPEYDVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRAN 501
+E N I ++ I+K +++ K+ +Y + N L + K +S SGVL++TVLTS +PEY +G + K +FSCKH+C YCPNEPAHEGNN+V QPRSYL+ EP V RAN
Sbjct: 62 EEFKNNIETFKTTSNIDKFKKNIQKKYKYTISNAQFIKIYKHLNLENQQLRNLITKKKCKSNSGVLVITVLTSAHPEYIDEESG----EVKRAKFSCKHDCAYCPNEPAHEGNNWVAQPRSYLYSEPAVLRAN 190
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Match: A0A0N7G7K6_CEV01 (ELP3-like protein acetyltransferase n=1 Tax=Chrysochromulina ericina virus TaxID=455364 RepID=A0A0N7G7K6_CEV01) HSP 1 Score: 101 bits (251), Expect = 1.260e-21 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 205 VVYHLYMAQEVRNDA------LEKALVSKHVRSLSGVLIVTVLTSPYPEY-DVPGAGGRPAKRKVQRFSCKHNCYYCPNEPAHEGNNFVPQPRSYLHDEPGVRRAN 501
V+ H + +++ D L+ L K R+ SGV I+T++T+P+PEY D G +K Q FSCKHNCYYCPNEPAHEGNN+ QPRSYL+ EP V+RAN
Sbjct: 90 VIKHFIIKEDLPQDLQKYFELLKLLLRKKPFRNSSGVTIITLITAPFPEYIDENGT------KKTQSFSCKHNCYYCPNEPAHEGNNWQAQPRSYLYLEPAVQRAN 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15087.3844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15087.3844.1 >prot_Ecto-sp13_S_contig15087.3844.1 ID=prot_Ecto-sp13_S_contig15087.3844.1|Name=mRNA_Ecto-sp13_S_contig15087.3844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp MAPPQVTEEVRHSASPDIESLVYDADHESRMPALKELLNEILPLRSWKEIback to top mRNA from alignment at Ecto-sp13_S_contig15087:973..3842+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15087.3844.1 ID=mRNA_Ecto-sp13_S_contig15087.3844.1|Name=mRNA_Ecto-sp13_S_contig15087.3844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15087:973..3842+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15087:973..3842+ >mRNA_Ecto-sp13_S_contig15087.3844.1 ID=mRNA_Ecto-sp13_S_contig15087.3844.1|Name=mRNA_Ecto-sp13_S_contig15087.3844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15087:973..3842+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |