mRNA_Ecto-sp13_S_contig1506.3820.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 1.140e-156 Identity = 234/252 (92.86%), Postives = 239/252 (94.84%), Query Frame = 3
Query: 771 MDAPVFPYQETRGGDVSALRHWLSIGGTIDAPLLRSVAETWTPLALACAEGRVELVRTIVEIGGARPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATPLDMAEMAGFDDAATLLRSRALPGEDGGDAVRRRKALASWLGVLGCEEFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPSEKLGLRKKLLAMHGVEVFLNSDG 1526
MDAPVFPYQETRGGD SALRHWLS GGTIDAPLLRSVAETWTPLALACAEGRVELVR IVEIGGARPSFSAQT+VLAS SPLHVASRYGHAGVAA+LLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLL AGAD SSSFEAPYAA LDMAEMAGFDDAATLLRSRAL GEDGG+AVRRRK LASWLGVLGC EFLGRFLRAGYDDLQFMASQGLTEADLDCVGVP +KLGLRKKLLAMHGVE FLN+DG
Sbjct: 1 MDAPVFPYQETRGGDFSALRHWLSQGGTIDAPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSFEAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFLNADG 252
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A6H5LAA3_9PHAE (PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAA3_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 7.710e-13 Identity = 43/55 (78.18%), Postives = 43/55 (78.18%), Query Frame = -3
Query: 1 METGDCGPTPYQPLDSSLGRTGKTDTRSGSSSCXXXXXXXXXSGDGSGLLSGGRH 165
METGDCGPTPY PL SSLG TGKTDTRSGSSSC SGDGSGLLSGGRH
Sbjct: 1 METGDCGPTPYWPLHSSLGGTGKTDTRSGSSSCSSNRNSSNASGDGSGLLSGGRH 55
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH) HSP 1 Score: 65.1 bits (157), Expect = 1.870e-9 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 1341 VLGCEEFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPSEKLGLRKKLLAMHGVEVF 1511
LG E+L RFL AGYD L F+ + GL++ DLDC+GVP K+GLR+K+ +HG++ F
Sbjct: 9 TLGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A485KR53_9STRA (Aste57867_10744 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR53_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.130e-6 Identity = 44/139 (31.65%), Postives = 65/139 (46.76%), Query Frame = 3
Query: 861 APLLRSVAETWTPLALACAEGRVELVRTIVEIG-----------------GARPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATPLDM 1226
AP+ WTPLA+AC GR+E+V+ ++ IG G +A + + +PLH A HA VA LL G V+ D+ G L +G+ I+++L GAD S+ + Y TPLD+
Sbjct: 90 APVCFLTTAGWTPLAVACFHGRLEIVQYLLGIGAADFYAQMKRQAAIKTSGGEKVTTAAKKPIQQNTPLHWACYKSHAQVACALLAWGFSVEDADSCGNRALHLVCSSGNFDMIQIILAHGADVSA--KNMYGNTPLDL 226
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A7R8WM28_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WM28_9CRUS) HSP 1 Score: 60.5 bits (145), Expect = 7.240e-6 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 3
Query: 894 TPLALACAEGRVELVRTIVEIGGARPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATPLDMAEMA 1238
TPL LA GR +V ++ GA P+ T + SPLH A A A +L+ GAVVDA+D G TPL +A G+GH +EVL+ GA+ + + Y +PL A+ A
Sbjct: 181 TPLLLATLNGRHSVVEVLLA-HGADPNI---TNRVEETSPLHQAKS---AETAELLIAKGAVVDAKDKSGETPLFFATGSGHHSVVEVLIANGAEPNIANR--YGTSPLHRAKSA 286
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A091BEW2_9GAMM (Uncharacterized protein n=1 Tax=Arenimonas composti TR7-09 = DSM 18010 TaxID=1121013 RepID=A0A091BEW2_9GAMM) HSP 1 Score: 60.5 bits (145), Expect = 8.380e-6 Identity = 70/218 (32.11%), Postives = 93/218 (42.66%), Query Frame = 3
Query: 774 DAPVFPYQETRGGDVSALRHWLSIGGTIDA------PLLRSVAETWTPLALACAEGRVELVRTIVEIGG--ARPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATPLDMAEMAGFDDAA---TLLRSRA-LPGEDGGDAVRRRKALASWLGVLGCEEFLGRFLRAGYD 1391
D P GD+ LR ++ G ++A PLL + ++W GR E V T++ G P T PLH A+R A VAA+LL+ GAV+DA + GF+PL A G+ + LL GA P P +A AG DDAA LLR +A + G G A A+ G E +G L AG D
Sbjct: 268 DQRTLPMLAALLGDLRLLRELIARGVDLNAEHGGLTPLLVATRDSW--------HGRPEAVMTLLTNGADARHPDADGNT-------PLHHAARSTDAAVAALLLDAGAVLDALNGEGFSPLGIACAAGNWRLARFLLERGAKPE-----PKDGQPALLAAAAGDDDAAGVQLLLRHKAKVDGRGRGHRSALMVACAA-----GNAEIVGELLDAGAD 460
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A6A5Z5S9_9PLEO (Ankyrin repeat-containing domain protein n=1 Tax=Lophiotrema nucula TaxID=690887 RepID=A0A6A5Z5S9_9PLEO) HSP 1 Score: 58.2 bits (139), Expect = 1.410e-5 Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 3
Query: 894 TPLALACAEGRVELVRTIVEIGGARPSFSAQTRV-LASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSF---EAPYAA-TPLDMAEMAGFDDAATL 1262
TPL LAC EG +E+VR+++ GA P+ SA R SPL +A G+ GV L++ GA V+AR G T L A + + + AGA+T S + + P +A TPL A M+ DD +L
Sbjct: 63 TPLFLACTEGHLEVVRSLLS-HGADPNISANERSNYELYSPLQIAIAIGNLGVVNALVDAGASVEARLKIGVTCLHNAVYRMQPDMVRLFIAAGANTESEYSIEDGPQSAGTPLIAAAMS--DDMESL 187
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A127JYK2_9BURK (Ankyrin n=1 Tax=Ramlibacter tataouinensis TaxID=94132 RepID=A0A127JYK2_9BURK) HSP 1 Score: 57.0 bits (136), Expect = 1.590e-5 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 3
Query: 894 TPLALACAEGRVELVRTIVEIGGA--RPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTSSSFEAPYAATPLDMAEMAGFDDAATLL 1265
+PL +AC G++E+ R ++E G +P ++ PLH A+ GH + +LL+ A +DA G TPL AA G + +++LL +GAD + + +A LD A D+A L+
Sbjct: 93 SPLMMACLRGQLEVARRLIERGADVNKPGWA----------PLHYAATNGHLAIIELLLDRHAYIDAESPNGTTPLMMAAHYGSPQAVKLLLESGADATMKNQQGLSA--LDFAHRGNRRDSAELI 206
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A507FK98_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FK98_9FUNG) HSP 1 Score: 58.5 bits (140), Expect = 3.310e-5 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 3
Query: 888 TWTPLALACAEGRVELVRTIVEIGGARPSFSAQTRVLASPSPLHVASRYGHAGVAAILLELGAVVDARDTF-GFTPLCYAAGNGHLKTIEVLLGAG 1172
T + L++AC G E+ ++ G S L SPLH+A+R G A + ++L++ G VD D F G+TP+ YAA GH++ +E+L+GAG
Sbjct: 457 TSSSLSIACEHGHTEIATLLLSKGA---SLVLNNDGL---SPLHLAARAGXADLLSLLIKHGGDVDLVDVFQGWTPVFYAATEGHIRCVELLIGAG 546
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Match: A0A3N4L9E7_9PEZI (Ankyrin n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4L9E7_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 4.640e-5 Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 3
Query: 882 AETWTPLALACAEGRVELVRTIVEIGGARPSFSAQTRVLASPS---PLHVASRYGHAGVAAILLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLGAGADTS 1184
AE WTPLA A GR +L + +V G +AQ L P+ +H+A+ YG +LL++GA ++ R++FG T L A HL +++L G GAD +
Sbjct: 6 AEGWTPLASAAFNGRKDLCQFLVGKGCTLCLNAAQKEQL-KPNFSCRVHLAAVYGDKTTLQLLLDMGADINERNSFGETALLQAVCFNHLSCVKLLTGRGADAT 108 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1506.3820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1506.3820.1 >prot_Ecto-sp13_S_contig1506.3820.1 ID=prot_Ecto-sp13_S_contig1506.3820.1|Name=mRNA_Ecto-sp13_S_contig1506.3820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=484bp MCCTAGFSVDATAGSFSQETVLKPLVGMFLLACDRFVFLSEANLHRLMQRback to top mRNA from alignment at Ecto-sp13_S_contig1506:7113..9221- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1506.3820.1 ID=mRNA_Ecto-sp13_S_contig1506.3820.1|Name=mRNA_Ecto-sp13_S_contig1506.3820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2109bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1506:7113..9221- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1506:7113..9221- >mRNA_Ecto-sp13_S_contig1506.3820.1 ID=mRNA_Ecto-sp13_S_contig1506.3820.1|Name=mRNA_Ecto-sp13_S_contig1506.3820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1452bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1506:7113..9221- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |