mRNA_Ecto-sp13_S_contig15026.3801.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15026.3801.1
Unique NamemRNA_Ecto-sp13_S_contig15026.3801.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: D7FGU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU9_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.980e-163
Identity = 238/241 (98.76%), Postives = 240/241 (99.59%), Query Frame = 1
Query:    1 QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQE+GSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVF AVFYRINRRLQGKRLLEWEG+DDSKGMDMFHEWHEHLDL
Sbjct:  275 QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFGAVFYRINRRLQGKRLLEWEGMDDSKGMDMFHEWHEHLDL 515          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A836CEU6_9STRA (UAA transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU6_9STRA)

HSP 1 Score: 360 bits (925), Expect = 3.640e-120
Identity = 177/241 (73.44%), Postives = 203/241 (84.23%), Query Frame = 1
Query:    1 QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            QVLSK+FKI PIM+MG++LGNK YP YDY VAG I LG+ LF+ SSEG+  G D FGQQ    +V CG+MLL LYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVM AFST+FS VTLVH  ELVPFF FV  HPEIHLHF+AF + ST+GQLLIFHTIRSFGAVVFAIIMT RIALSILVSCL+YDH +TE+G LGM++VF AV YRI R++QG+RL++W G+DDSK  ++ HEWHEHLD 
Sbjct:  273 QVLSKAFKIAPIMLMGRMLGNKSYPLYDYCVAGTIGLGVALFVTSSEGLRLGADSFGQQ---GAVGCGIMLLGLYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMNAFSTVFSLVTLVHAGELVPFFNFVGAHPEIHLHFIAFSLLSTVGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLMYDHAITEMGSLGMILVFCAVSYRIQRKMQGQRLVKWRGIDDSKAPEVIHEWHEHLDF 510          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S0AH51_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AH51_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.180e-97
Identity = 143/239 (59.83%), Postives = 182/239 (76.15%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            L KSFK+ P+M MGK+LGNKEYP YDYVVA  I LGIT+F++ SE ++FG D+ G  EK S+   G+MLL  +L FDSFTSQWQSRMF +HRDLS I++MF  +AFST+ SF+TLVH  EL P  +FV  H EIHLHF  F +CSTIGQL IF+TI++FGAVVFAIIMTTR+ LSI +SC++Y H V   G LG+++V  AV YRI R+ +GK+L+ W+G+ D K M++  EWHEH D+
Sbjct:   51 LFKSFKLAPVMAMGKMLGNKEYPQYDYVVALFIGLGITMFMSGSEDLEFGYDVHG--EKASAAWTGVMLLGFFLFFDSFTSQWQSRMFQRHRDLSMIELMFATSAFSTVLSFITLVHSKELGPALSFVVQHSEIHLHFFLFSICSTIGQLFIFYTIKNFGAVVFAIIMTTRVLLSIALSCILYGHEVGSTGFLGLMVVMGAVCYRIKRKAEGKQLIRWQGIGDEKAMELVQEWHEHADM 287          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S2BZ86_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZ86_9STRA)

HSP 1 Score: 286 bits (733), Expect = 2.110e-93
Identity = 142/241 (58.92%), Postives = 172/241 (71.37%), Query Frame = 1
Query:    1 QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            Q+L K FK+VPIM+MGK LGNK YP YDYVV  +I  GI +F+ S+E ++FGTD  G  E  S   CGMMLL  +LVFDSFT QWQSRMF++H DLSP  MMF +  FS IFSF+TLVH  EL  F  FV  HPE+H H + F +CST+GQL IF TIR+FGAVVFAIIM TRI LSI+ SC+IY HP++  G  G+ IVFA++ YRI R+ QG  L+ W     S G + FHE HEHLD+
Sbjct:  102 QMLFKCFKLVPIMLMGKFLGNKSYPAYDYVVCFMIGFGIAIFMVSTEDMEFGTDSIGTPETWSGTICGMMLLCFFLVFDSFTGQWQSRMFSRHEDLSPFHMMFAVNTFSMIFSFITLVHTKELEQFVEFVIRHPEMHFHVMVFSICSTVGQLYIFQTIRNFGAVVFAIIMNTRIILSIVFSCIIYSHPISSQGSFGLFIVFASIAYRIKRKTQGHELIRWR-THISHGSEWFHEVHEHLDM 341          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S2UIR8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIR8_9STRA)

HSP 1 Score: 293 bits (750), Expect = 3.330e-93
Identity = 141/239 (59.00%), Postives = 189/239 (79.08%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            L KSFK+ P+M MGKILGNK YP YDY VA VIA+GIT+F++SS+ ++FG D+ G  ++ S V  G+ML++L+L FDSFTSQWQSRMF +HRDLS I++MF  +AFST+ S +TL+H  EL P  +FV  H EIHLHF  F +CSTIGQL IF+TI++FGAVVFAIIMTTR+ +SI +SC++Y H VT  G LG+++V +AV YRI+R+LQGK+L++W+G+ D K  ++  EWHEH+D+
Sbjct:  323 LFKSFKLAPVMAMGKILGNKSYPQYDYFVALVIAVGITMFMSSSDDLEFGYDVHG--DRASEVWTGIMLMSLFLFFDSFTSQWQSRMFQRHRDLSMIELMFATSAFSTVLSLITLIHTGELGPALSFVYRHSEIHLHFFMFSICSTIGQLFIFYTIKNFGAVVFAIIMTTRVLISIALSCIMYGHQVTSTGFLGLVLVVSAVGYRISRKLQGKQLVKWQGMGDEKASELVQEWHEHVDM 559          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A6S8ZJK7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJK7_9STRA)

HSP 1 Score: 290 bits (741), Expect = 7.230e-92
Identity = 137/238 (57.56%), Postives = 187/238 (78.57%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLD 720
            L KSFK+ P+M MGK+LGNKEYP YDY VA VI +G+ +F++S+EGV+FG D++G  E+ S+   G+ML+ L+L FDSFTSQWQSRMF +HRDLS +++MF  +AFST+ S +TL+H DEL P   FV  H EIHLHF  F VCSTIGQ+LIF+TI++FGAVVF IIMTTR+ LSI +SC++Y H V+  G LG+++V  AV YRI ++++GK L++W+G++D+K  ++  EWHEH+D
Sbjct:  322 LFKSFKLAPVMAMGKLLGNKEYPQYDYFVALVIGIGLAMFMSSTEGVNFGYDVYG--EEVSATWTGIMLMFLFLFFDSFTSQWQSRMFQRHRDLSMLELMFATSAFSTVLSLITLIHTDELGPALDFVWRHSEIHLHFFMFSVCSTIGQILIFYTIKNFGAVVFTIIMTTRVLLSIALSCMLYGHKVSSTGFLGLMVVLGAVCYRIKKKVEGKHLIKWQGMEDTKAHELVQEWHEHVD 557          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S2IJR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJR1_9STRA)

HSP 1 Score: 290 bits (741), Expect = 9.150e-92
Identity = 136/238 (57.14%), Postives = 189/238 (79.41%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLD 720
            L KSFK+ P+MVMGK+LGNKEYP YDY VA VI +G+ +F++S+EG++FG D++G++   S+   G++L+ L+L FDSFTSQWQSRMF +HRDLS ++MM   +AFST+ SF+TL+H +EL P  +FV  H EIHLHF  F +CSTIGQ+LIF+TI++FGAVVF IIMTTR+ LSIL+SC++YDH VT +G  G+++V  A+ YRI R+ +G +L++W+G+DD K  ++  EWHEH+D
Sbjct:  332 LFKSFKLAPVMVMGKMLGNKEYPQYDYFVALVIGVGLAMFMSSTEGLNFGYDVYGEK---SATWTGILLMFLFLFFDSFTSQWQSRMFQRHRDLSMVEMMLATSAFSTVLSFITLIHTNELGPALSFVYRHSEIHLHFFLFSICSTIGQILIFYTIKNFGAVVFTIIMTTRVLLSILLSCVLYDHEVTGIGFGGLMLVMGAICYRIKRKAEGTQLIKWQGMDDHKAPELVQEWHEHVD 566          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S2K8X4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8X4_9STRA)

HSP 1 Score: 286 bits (732), Expect = 2.800e-91
Identity = 137/239 (57.32%), Postives = 183/239 (76.57%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            L KSFK+ P+M+MGK+LGNKEYP YDYVVA VI  GI LF++S++ + FG D +G++E+ +    G+MLL LYL+FDSFT QWQS+MFT+H+DLS ++M+F  +AFST+ S +TLVH  EL P   FV  H EIHLHF  F +CSTIGQL+IF+TI++FGAVVFA+IMT R+ +SI +SC++Y H VT  G LGM +V   V YRI R+ +G++LL W G+DD K  ++ +EWHEHLD+
Sbjct:  257 LFKSFKLAPVMLMGKLLGNKEYPQYDYVVALVIGGGIALFMSSTDDLHFGYDAYGEKEEHTLT--GIMLLCLYLLFDSFTGQWQSKMFTRHKDLSVMEMLFATSAFSTVLSLITLVHTKELWPALDFVVRHQEIHLHFFLFSICSTIGQLMIFYTIKNFGAVVFALIMTVRVLVSIAISCVLYGHNVTSTGFLGMALVVCGVLYRIKRKAEGEKLLRWAGIDDDKAPELVNEWHEHLDM 493          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A7S4NEH4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEH4_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.930e-91
Identity = 141/239 (59.00%), Postives = 185/239 (77.41%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            L K+FK+ P+M MGKILGNKEYP YDYVVA VI +G+T+F++S++ + FG D++G  E+ S+   G+MLL  +L FDSFTSQWQSRMF  HRDLS I++MF  +AFSTI SF+TLVH  EL P  +FV  H EIHLHF  F +CSTIGQL IF+TI++FGAVVF IIMTTRI LSI +SC++Y H VT +G LG+++V  AV YRI R+ +GK+L++W+G+ D K  ++  EWHEH+D+
Sbjct:  377 LFKAFKLAPVMAMGKILGNKEYPQYDYVVALVIGVGLTMFMSSTDDLHFGYDIYG--EEASATWTGVMLLFFFLFFDSFTSQWQSRMFQHHRDLSMIELMFATSAFSTILSFITLVHSKELWPALSFVYRHSEIHLHFFMFSMCSTIGQLFIFYTIKNFGAVVFTIIMTTRILLSIALSCILYGHEVTSVGFLGLMMVMCAVCYRIKRKAEGKQLIKWQGMGDDKAPELVQEWHEHVDM 613          
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Match: A0A1E7FSC8_9STRA (UAA transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSC8_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.860e-90
Identity = 132/241 (54.77%), Postives = 182/241 (75.52%), Query Frame = 1
Query:    7 LSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGV--DFGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL 723
            L KSFK+ P+M+MGK++GNK+YP YDY VA VI  GI +F++S++ +   F  D  G  E  S+   G+MLL+ YL FDSFTSQ+QSR+F +H DLS +++MF  +AFST+ S VTLVH  EL P +AFV +H EIHLHF  F +CSTIGQL IF+TI++FGAVVF ++MT RI LSI +SC++Y HP++ +G LG+ +V  AV YRI ++ +G++L+ W+G+DD KG ++ HEWHEHLD+
Sbjct:   95 LFKSFKLGPVMLMGKLIGNKQYPVYDYCVALVIGCGIAIFMSSTDDLRFSFSQDYLGNTETDSAKWTGVMLLSFYLFFDSFTSQFQSRLFQRHLDLSIVELMFATSAFSTVLSAVTLVHTKELSPAYAFVMEHSEIHLHFFMFSICSTIGQLFIFYTIKNFGAVVFTLMMTARILLSIALSCILYGHPISNVGYLGLALVVVAVLYRIKKKAEGQQLIRWQGMDDDKGKELVHEWHEHLDM 335          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15026.3801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGU9_ECTSI1.980e-16398.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEU6_9STRA3.640e-12073.44UAA transporter family-domain-containing protein n... [more]
A0A7S0AH51_9STRA1.180e-9759.83Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2BZ86_9STRA2.110e-9358.92Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UIR8_9STRA3.330e-9359.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6S8ZJK7_9STRA7.230e-9257.56Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2IJR1_9STRA9.150e-9257.14Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2K8X4_9STRA2.800e-9157.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4NEH4_9STRA2.930e-9159.00Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7FSC8_9STRA1.860e-9054.77UAA transporter n=1 Tax=Fragilariopsis cylindrus C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15026contigEcto-sp13_S_contig15026:873..3561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score473.8
Seed ortholog evalue4.9e-131
Seed eggNOG ortholog2880.D7FGU9
Preferred nameSLC35B2
Model size726
KEGG koko:K15276
KEGG TC2.A.7.11.2,2.A.7.11.3
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000295,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0006029,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007389,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009798,GO:0009950,GO:0009953,GO:0009987,GO:0009994,GO:0012505,GO:0015012,GO:0015075,GO:0015215,GO:0015216,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022857,GO:0030154,GO:0030166,GO:0030173,GO:0030176,GO:0030201,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046963,GO:0046964,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050427,GO:0050428,GO:0051179,GO:0051234,GO:0051503,GO:0051704,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072348,GO:0072521,GO:0072522,GO:0072530,GO:0090407,GO:0098588,GO:0098656,GO:0098791,GO:0098827,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1901679,GO:1901682,GO:1902559
Exons4
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1581@2759
Ec32 ortholog descriptionUAA transporter
Ec32 orthologEc-11_000740.1
Cds size726
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462800.6696541-CDS-Ecto-sp13_S_contig15026:872..10851681462800.6696541-CDS-Ecto-sp13_S_contig15026:872..1085Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15026 873..1085 -
1681462800.685442-CDS-Ecto-sp13_S_contig15026:1882..21131681462800.685442-CDS-Ecto-sp13_S_contig15026:1882..2113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15026 1883..2113 -
1681462800.6935527-CDS-Ecto-sp13_S_contig15026:2449..26021681462800.6935527-CDS-Ecto-sp13_S_contig15026:2449..2602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15026 2450..2602 -
1681462800.7059186-CDS-Ecto-sp13_S_contig15026:3432..35611681462800.7059186-CDS-Ecto-sp13_S_contig15026:3432..3561Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15026 3433..3561 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15026.3801.1prot_Ecto-sp13_S_contig15026.3801.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15026 873..3561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15026.3801.1

>prot_Ecto-sp13_S_contig15026.3801.1 ID=prot_Ecto-sp13_S_contig15026.3801.1|Name=mRNA_Ecto-sp13_S_contig15026.3801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
QVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVD
FGTDMFGQQEKGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQ
MMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIG
QLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIV
FAAVFYRINRRLQGKRLLEWEGVDDSKGMDMFHEWHEHLDL*
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mRNA from alignment at Ecto-sp13_S_contig15026:873..3561-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15026.3801.1 ID=mRNA_Ecto-sp13_S_contig15026.3801.1|Name=mRNA_Ecto-sp13_S_contig15026.3801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2689bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15026:873..3561- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTTTTGTCGAAGAGCTTCAAGATCGTGCCCATCATGGTCATGGGCAA GATTCTCGGAAACAAGGAGTACCCGTTCTACGACTACGTCGTGGCAGGCG TTATCGCCCTGGGGATCACTCTTTTCCTGGTGCGTTCGTCGCAGAGAACA ATGTGTCCTCCCCGTATGTCATGGAGATTTTTTGTGTTAGCCCCGGTGCG TGACGGTGACGGTTTCACGAGTTGGATGGAACGACGCCTTCTTGTGTTAG CCCCGGTGGGTAAGGGTGATGCTTTCACGAGCTAGATGGAATAACGCCGT TGTAATATGGTCGCCCCTGCATAGGTGTCCGTCTTTCTTCGTGGAGCAAG TTCGTGCTGATATTGAAGGTGTTTTGAGATGTACACGAGAGCCCCGTGAC CTATGCCAGCTCCCGAAGGGTAGATGTCGTCGTGTGTTCGTGCGTGTTGG TGGTCGTTGCGAATCTGGAAGGCTGGTTGTGCACTGCGAAATATAGCCGA ATTGCAGCGACCGCCAGCAACACCGTCCCTCTGGTGCGGTGTTAGCTCTC CCCCCCTTTCCCGCTATTCTCCACGGATGTGGTCTAGCTCACGAGATGAT AGGTGGAGCTAATCGCTTCCGCTTGACACGGATGGCCCACCAACGTATAG CAAACAAGAGCGCCAATCACAGATCTGCGAAGTCAGGGGGCGCTGGTTTG CAGCTCGCCCCCGTTTGATTTCGGGTGTGTTGCCGATACGGCTCCTTTGG CCTCCGTTCTTCTTCTCTTCGAAGTTCGACGTGTACCGACACGCCGACAA GATTTGGTTATGTCCAAATTTAAGCGCCTAAGCACACAGTCAAGATTATT TGCTTCGCCTTTCATGTCTTACCGCAAGCCGATCATCGCGATCATCGCAT TCCTCCACCCTTTTGTTGTCGCTTGTCGCTTGTCTCTTCTGTATCGGTTT TGTGTCCAGAACTCCTCCGAGGGGGTTGACTTCGGGACAGACATGTTCGG CCAGCAGGAGAAGGGCAGCAGCGTAGCGTGCGGCATGATGCTGCTGGCTC TTTACCTGGTGTTCGACTCCTTCACCTCGCAGTGGCAGAGCCGCATGTTC ACCAAGCACAGGGTGAGCAGTAGGCATTCCCGCGTCGCACGATGCTGCTT GCCTCGCGTCGGCCACAGCTGGCCGCTTTAGTGTTGTTGGATGTCGCCTT CTTTTTTGCATGAGTATGGTTGTTGTGGCTGTCGCTGCACGCACGCAGGT ACAAAAACTCTCGCCCACCTTTCTGGAAAAACCCAAAACCATACCTCGCT TCTCGTCTACAACTACCACTCAAAGCTAGACTTCTATGTAAAGGTTCTAC CCTCAACACACATTCCCATCCGTGTGTCCCCTCAACCCCCACCCCCCCAC CCCCTGGCATGGAAATCGAACCGATCGTTTCTCTCCTCCCTTCCCCAGGA CTTGAGCCCGATCCAGATGATGTTCGTCATGACGGCCTTCAGCACGATCT TCTCTTTCGTGACCCTGGTGCACCAAGACGAGCTGGTCCCCTTCTTCGCC TTCGTGTCCGACCATCCGGAGATCCACCTGCACTTCGTGGCCTTCGGGGT GTGCTCGACCATCGGCCAGCTCCTCATCTTCCACACCATCCGGTCGTTCG GGGCGGTTGTGTTCGCGATCATCATGACGGTAAGGAGGAGGTACCACCGT ATCGATGTCATGTTGTTGTTGTGGCGAGGATTGTTGCTTGTGTTGTGGTT GGAAGTTGTGGGTGCCGGTGCTGGTGGTGTAATTGTTGTTCACTTTCAAG TTGTTGTGTTGTTTGTTGTTGCCTTGACACTGGAAACTGTGTCGTTGTCT CCGTATTGAAAACGTTCCCAGTCTCTGCTCAGTACCTCTAGCATCGGTGC TGACTGGTCCAACTGACGCGGACTCCTTTGTGGTCGTTTAATCCCGCAAT GCGTCTAGACACATCACATATATTGTTCGTGGCGGATGGCTCTTGACAGA CTGGTTTTATGGTTTCGGATTTTCCTTTGGGCACGGGGAAGTGTTGCTCG ATGAATAGCGTTGGATTTGGCTTTGGCAGTTGTTCATTGACTTTGGTCTC CTTGTCCGGCAATGGTGGACTGTTGGGTCGAGCTCAGATGATGCGCACGT TGTTCGCGCTTTATTTTCCTTGCTCTCAATGGGGCCAGTTTAAGACCGTG TGTCACATCCTTAATTGGATCTGGTCGGCGCAGGCAAAGTATGGACGATT TTGCGCTGCGTTTGTGCGCTACGGGCAGCTATATCTCATGGATAATCACC CCACCTGCTGAAGTCCTTGCTATCCTTTGCTTGACCCCCCGCTCACCTCG TCCCACCCAACGCTTTCTTGGCAAGCGCAGTATGCCATCCGTAAGCTGCC TCGTGTTCGCTGCGGTTCAACTGTTTTCCGCATCCCGTCGTACGTCATTC GTTTGCTGCTGCTGCTGCTACTGCAGACGAGGATAGCCCTCAGCATCCTT GTGTCGTGCCTCATCTACGACCACCCCGTCACGGAGCTGGGACTCCTGGG GATGCTGATCGTGTTCGCGGCGGTTTTCTACCGCATCAACCGCCGCTTGC AGGGCAAGAGGCTGCTGGAGTGGGAGGGGGTGGACGACTCTAAGGGGATG GACATGTTCCACGAGTGGCATGAGCACCTCGACCTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15026:873..3561-

>mRNA_Ecto-sp13_S_contig15026.3801.1 ID=mRNA_Ecto-sp13_S_contig15026.3801.1|Name=mRNA_Ecto-sp13_S_contig15026.3801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15026:873..3561- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTTTTGTCGAAGAGCTTCAAGATCGTGCCCATCATGGTCATGGGCAA
GATTCTCGGAAACAAGGAGTACCCGTTCTACGACTACGTCGTGGCAGGCG
TTATCGCCCTGGGGATCACTCTTTTCCTGAACTCCTCCGAGGGGGTTGAC
TTCGGGACAGACATGTTCGGCCAGCAGGAGAAGGGCAGCAGCGTAGCGTG
CGGCATGATGCTGCTGGCTCTTTACCTGGTGTTCGACTCCTTCACCTCGC
AGTGGCAGAGCCGCATGTTCACCAAGCACAGGGACTTGAGCCCGATCCAG
ATGATGTTCGTCATGACGGCCTTCAGCACGATCTTCTCTTTCGTGACCCT
GGTGCACCAAGACGAGCTGGTCCCCTTCTTCGCCTTCGTGTCCGACCATC
CGGAGATCCACCTGCACTTCGTGGCCTTCGGGGTGTGCTCGACCATCGGC
CAGCTCCTCATCTTCCACACCATCCGGTCGTTCGGGGCGGTTGTGTTCGC
GATCATCATGACGACGAGGATAGCCCTCAGCATCCTTGTGTCGTGCCTCA
TCTACGACCACCCCGTCACGGAGCTGGGACTCCTGGGGATGCTGATCGTG
TTCGCGGCGGTTTTCTACCGCATCAACCGCCGCTTGCAGGGCAAGAGGCT
GCTGGAGTGGGAGGGGGTGGACGACTCTAAGGGGATGGACATGTTCCACG
AGTGGCATGAGCACCTCGACCTCTAG
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