mRNA_Ecto-sp13_S_contig15009.3791.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 6.560e-18 Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 1
Query: 1 TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 126
T VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV
Sbjct: 721 TPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 762
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.280e-17 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 7 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 126
VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV
Sbjct: 540 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 579
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A836CA55_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA55_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.580e-13 Identity = 33/38 (86.84%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 7 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEK 120
VGHVLVFSFIQR+FP+FFPST+T+RRQNLLKMY EVEK
Sbjct: 232 VGHVLVFSFIQRYFPDFFPSTFTERRQNLLKMYEEVEK 269
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S1NU99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU99_9EUGL) HSP 1 Score: 71.2 bits (173), Expect = 2.650e-13 Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 1
Query: 7 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKK 123
+GHVLVFSFIQRFFP FFPS+++DRRQNLLKMY E+EKK
Sbjct: 693 IGHVLVFSFIQRFFPEFFPSSFSDRRQNLLKMYEEIEKK 731
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S3UWA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA8_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 4.160e-12 Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKK 123
T VGHVL+FSFIQRFFP+FFP+ YTD+RQNLLK+Y +E+K
Sbjct: 315 TPVGHVLIFSFIQRFFPDFFPTPYTDQRQNLLKLYETIEEK 355
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S1R4U4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R4U4_ALECA) HSP 1 Score: 63.5 bits (153), Expect = 8.330e-12 Identity = 26/38 (68.42%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 1 TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEV 114
T +GHVLVFSFIQ+FFP+FFPST+T+RRQN++K+Y ++
Sbjct: 69 TPIGHVLVFSFIQKFFPDFFPSTFTERRQNVVKIYQDI 106
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.120e-11 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 1 TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKK 123
T +GHVLVFS IQR FP+FFPST+T+RRQNL KMY E++KK
Sbjct: 674 TPIGHVLVFSLIQRIFPDFFPSTFTERRQNLSKMYDEIDKK 714
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S2X822_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2X822_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 1.350e-11 Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 1
Query: 1 TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 126
T VGHVLVFS IQ+FFP+F+PS YT+RRQNL+++Y E+E+K+
Sbjct: 132 TPVGHVLVFSAIQKFFPDFYPSPYTERRQNLVRLYQEIEQKL 173
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S0U8H3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8H3_HEMAN) HSP 1 Score: 65.9 bits (159), Expect = 2.100e-11 Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 1
Query: 7 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVE 117
VGHVLVFSFIQRFFP+FFPS YTDRRQ LL+MY VE
Sbjct: 468 VGHVLVFSFIQRFFPDFFPSPYTDRRQKLLRMYQAVE 504
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Match: A0A7S2XTH3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTH3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.550e-11 Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 1
Query: 7 VGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVE 117
VGHVLVFSFIQRFFP+FFPS++TDRRQNL +MY +E
Sbjct: 269 VGHVLVFSFIQRFFPDFFPSSFTDRRQNLARMYESIE 305 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15009.3791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15009.3791.1 >prot_Ecto-sp13_S_contig15009.3791.1 ID=prot_Ecto-sp13_S_contig15009.3791.1|Name=mRNA_Ecto-sp13_S_contig15009.3791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp TSVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKVHSback to top mRNA from alignment at Ecto-sp13_S_contig15009:3640..3771- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15009.3791.1 ID=mRNA_Ecto-sp13_S_contig15009.3791.1|Name=mRNA_Ecto-sp13_S_contig15009.3791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=132bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15009:3640..3771- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15009:3640..3771- >mRNA_Ecto-sp13_S_contig15009.3791.1 ID=mRNA_Ecto-sp13_S_contig15009.3791.1|Name=mRNA_Ecto-sp13_S_contig15009.3791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=132bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15009:3640..3771- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |