mRNA_Ecto-sp13_S_contig1497.3764.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1497.3764.1
Unique NamemRNA_Ecto-sp13_S_contig1497.3764.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: D8LLN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN3_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 6.900e-156
Identity = 242/254 (95.28%), Postives = 247/254 (97.24%), Query Frame = 1
Query:    1 MNRAARTLLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKVGVEV 762
            MNRAA TLL KASGGQ ACL+ RGR LPLRRCLAAWGS+LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKS+LDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAK G ++
Sbjct:    1 MNRAAATLLRKASGGQSACLRRRGRHLPLRRCLAAWGSTLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKAGFDL 254          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A835Y3Q7_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3Q7_9CHLO)

HSP 1 Score: 261 bits (667), Expect = 2.270e-83
Identity = 133/209 (63.64%), Postives = 167/209 (79.90%), Query Frame = 1
Query:  112 SSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
            S LQ+ P VQ AL++G+P+VALESTIISHGMP+P+NLA A  VE ++RE GAVPAT+A++QG PH+G+  +QLE +A  G   +K SRRDL V +A+ +DGATTV+AT+ LA+LAG+ VFVTGG+GGVHRG E T DVSADL EL +TPI VVCAG KS+LDI +TLEVLET GV V + GTD+FPAFF+P SG  +P R+D+P E AA
Sbjct:    8 SLLQVSPEVQAALQQGKPVVALESTIISHGMPWPDNLATALEVEAVVRESGAVPATIAIIQGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRMDGATTVSATAALAALAGIHVFVTGGIGGVHRGGEVTMDVSADLTELGRTPIAVVCAGAKSILDIPRTLEVLETQGVAVAAYGTDEFPAFFTPRSGCRAPARVDSPEEAAA 216          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A239PP55_9RHOB (Pseudouridine-5'-phosphate glycosidase n=1 Tax=Paracoccus seriniphilus TaxID=184748 RepID=A0A239PP55_9RHOB)

HSP 1 Score: 258 bits (660), Expect = 1.260e-82
Identity = 136/212 (64.15%), Postives = 172/212 (81.13%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGP-RARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKV 750
            L   P V++AL E RP+VALESTII+HGMPYP+NL MAR VE +IR+ GAVPAT+AV+ G+ H+GLT + L++LA+  P +A K SR DLAV LA G  GATTVAAT   A+LAG+ VF TGG+GGVHRGAET+FDVSADL ELAQTP+ VV AG K++LD+ KT EVLET GVPV++ G D+ PAF+S SSG+P+PLR+D+P+E+AAAA++
Sbjct:    6 LTFSPEVEQALAEKRPVVALESTIITHGMPYPQNLEMARNVEQVIRDNGAVPATIAVMGGQIHIGLTDATLQALAQTPPEQAMKLSRADLAVCLANGRTGATTVAATMICAALAGISVFATGGIGGVHRGAETSFDVSADLHELAQTPVTVVAAGAKAILDLPKTWEVLETLGVPVIAYGQDELPAFWSRSSGIPAPLRMDSPAEIAAAARM 217          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: UPI000C176D93 (pseudouridine-5'-phosphate glycosidase n=1 Tax=Pararhizobium haloflavum TaxID=2037914 RepID=UPI000C176D93)

HSP 1 Score: 258 bits (660), Expect = 1.620e-82
Identity = 137/206 (66.50%), Postives = 165/206 (80.10%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
            LQ  P V+ A  EGRPIVALESTII+HGMP+P+NLAMARGVEDI+RE GA PAT+A+L G  HVGLT  QL +LA A     K SR DLA A+A+G +GATTVAAT  +A+LA + +F TGG+GGVHRGAE++FD+SADL ELA+TP++VVCAG K++LDI KTLEVLET GVPVV+ G D FPAF+S  SG+ SPLRLDTP  +A
Sbjct:   11 LQFSPAVEAARREGRPIVALESTIITHGMPFPDNLAMARGVEDIVREEGAEPATIAILDGTVHVGLTDDQLAALARAED-VLKVSRADLAFAVAEGRNGATTVAATMIVAALADISIFATGGIGGVHRGAESSFDISADLEELARTPVLVVCAGAKAILDIPKTLEVLETRGVPVVTFGADRFPAFWSRDSGLGSPLRLDTPDAIA 215          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A150GKH1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKH1_GONPE)

HSP 1 Score: 259 bits (661), Expect = 1.670e-82
Identity = 130/212 (61.32%), Postives = 167/212 (78.77%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKVG 753
            +++ P VQ AL EGRP+VALESTIISHGMP+P+NLA A  VE ++R+ GA PAT+A+++G PH+G+  +QLE +A  G   +K SRRDL V +A+ +DGATTV+AT+ LA+LAG++VFVTGG+GGVHRG E T DVSADL EL +TP+ VVCAG KS+LDI +TLEVLET GVPV + GTD+FPAFF+P SG  +P R+D+P E AA    G
Sbjct:    7 IRVSPEVQAALAEGRPVVALESTIISHGMPWPDNLATALEVEGVVRDSGATPATIAIIEGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRLDGATTVSATAALAALAGIQVFVTGGIGGVHRGGEATMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEVLETLGVPVAAYGTDEFPAFFTPRSGCQAPARVDSPKEAAALLDAG 218          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A7S2TTA8_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTA8_9EUKA)

HSP 1 Score: 254 bits (649), Expect = 1.780e-80
Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 1
Query:   22 LLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
            +LP+A+G        R   + ++   ++    + + P VQ AL++G+P+VALESTIISHGMPYP+N+  AR VED++R+ GA PAT+A+L G+  VGLT++QLE L   G + RKCSRRDLA+ +AQ  +GATTVAAT YLA LAG+ VFVTGG+GGVHRG E++ D+SADL EL +T + VVCAG KS+LDI +TLE LET+GVPVV   T  FPAFF+  SG P+PL L++P+E+A
Sbjct:   18 VLPEATG-------ERSGAMEVKTSASSPHPMINLSPEVQTALKQGKPVVALESTIISHGMPYPQNVNTARRVEDVVRKYGATPATIAILDGKVLVGLTSNQLEKLGTLGSKCRKCSRRDLALVVAQKGNGATTVAATMYLAKLAGISVFVTGGIGGVHRGVESSMDISADLTELGKTSVTVVCAGAKSILDIPRTLEFLETHGVPVVGYQTKHFPAFFTRESGCPAPLTLNSPAEIA 248          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: G4R5Y7_PELHB (Pseudouridine-5'-phosphate glycosidase n=5 Tax=Hyphomicrobiales TaxID=356 RepID=G4R5Y7_PELHB)

HSP 1 Score: 252 bits (644), Expect = 3.120e-80
Identity = 129/207 (62.32%), Postives = 160/207 (77.29%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
            L+I P ++ AL +G+P+VALESTII+HGMPYP+NL  A  VE ++R+ GAVPAT+AV+ G+ HVG+    LE LA  G +A K SRRDLA  L +G+   TTVA T  +A++AG+KVF TGG+GGVHRGAE+TFD+SADL EL+QTP+ VVCAG KS+LDI KTLEVLE+NGVPV+  GTD FPAFF+  SG     RLDTP EVAA
Sbjct:    5 LEISPEIKYALADGQPVVALESTIITHGMPYPQNLETALAVEQVVRDNGAVPATIAVMGGKCHVGVAGETLEELARTGLKAAKASRRDLAAILVKGLTAGTTVATTMQIAAMAGIKVFATGGIGGVHRGAESTFDISADLTELSQTPVAVVCAGAKSILDIPKTLEVLESNGVPVIGYGTDAFPAFFARESGHGVDYRLDTPDEVAA 211          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A250XM37_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XM37_9CHLO)

HSP 1 Score: 253 bits (645), Expect = 3.520e-80
Identity = 126/202 (62.38%), Postives = 164/202 (81.19%), Query Frame = 1
Query:  130 PGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
            P V RAL+EGRP+VALESTIISHGMPYP+N+  A  VE+++ ++GAVPAT+A++ G+P +GLT  QLE +A+AGP  RK SRRDL + +A+G+DGATTV+AT  LA+ +G+ VFVTGG+GGVHRG E+T D+SADL ELA+TP+ V+CAG KS+LDI +TLE LET+GV V +  TD+FPAFF+ SSG  +P R D+P EVA
Sbjct:   12 PEVARALQEGRPVVALESTIISHGMPYPQNIQTATEVEEVVSQQGAVPATIAIIGGKPCIGLTREQLEHIAKAGPAVRKVSRRDLPLVIAKGLDGATTVSATMLLAARSGINVFVTGGIGGVHRGGESTMDISADLTELARTPVAVICAGAKSVLDIPRTLEFLETHGVTVTAYQTDEFPAFFTRSSGCKAPCRSDSPLEVA 213          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A8J4D4U1_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4D4U1_9CHLO)

HSP 1 Score: 253 bits (647), Expect = 4.400e-80
Identity = 131/207 (63.29%), Postives = 164/207 (79.23%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
            L+I P VQ AL EGRPIVALESTII+HGMP+P+NL+ A  VE+++R  GAVPAT+A+++G PH+G+   QLE +A  G   +K SRRDL V +A+ +DGATTV+ATS LA+LAG+ VFVTGG+GGVHRG E   D+SADL EL +TPI VVCAG KS+LDI +TLEVLET GV V S GT++FPAFF+P SG  SP R+D+P+E AA
Sbjct:    6 LEISPEVQAALSEGRPIVALESTIITHGMPWPDNLSTALEVEEVVRASGAVPATIAIIKGVPHIGMQREQLEYIARNGTAVQKVSRRDLPVVMAKQLDGATTVSATSALAALAGIHVFVTGGIGGVHRGGEINMDISADLTELGRTPIAVVCAGAKSILDIPRTLEVLETWGVAVASYGTNEFPAFFTPRSGCRSPARVDSPAEAAA 212          
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A7Y2SKT8_9CHLR (Pseudouridine-5'-phosphate glycosidase n=2 Tax=Chloroflexales TaxID=32064 RepID=A0A7Y2SKT8_9CHLR)

HSP 1 Score: 251 bits (642), Expect = 5.880e-80
Identity = 130/206 (63.11%), Postives = 163/206 (79.13%), Query Frame = 1
Query:  118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
            L+I   +  AL+EGRPIVALEST+ISHG+PYP+NL +AR +ED +R  GAVPATV V  G P VG+ A+++E  A    + RK SRRD+A A+AQG DGATTVAAT  LA+ AGV+VF TGG+GGVHRGAE T+D+SADL ELA+TP++VVCAG K++LD+  TLE LET GVP+V LGTD+FPAF+S SSG+P P R + P+EVA
Sbjct:    2 LRISAELTAALDEGRPIVALESTVISHGLPYPQNLELARAMEDEVRAAGAVPATVGVSAGVPTVGMAAAEIERFATRSAQVRKLSRRDVAAAIAQGADGATTVAATMALAAAAGVEVFATGGIGGVHRGAELTWDISADLTELARTPVIVVCAGAKAILDLSATLEYLETLGVPLVGLGTDEFPAFYSRSSGLPVPARANDPAEVA 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN3_ECTSI6.900e-15695.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Y3Q7_9CHLO2.270e-8363.64Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A239PP55_9RHOB1.260e-8264.15Pseudouridine-5'-phosphate glycosidase n=1 Tax=Par... [more]
UPI000C176D931.620e-8266.50pseudouridine-5'-phosphate glycosidase n=1 Tax=Par... [more]
A0A150GKH1_GONPE1.670e-8261.32Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7S2TTA8_9EUKA1.780e-8055.88Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
G4R5Y7_PELHB3.120e-8062.32Pseudouridine-5'-phosphate glycosidase n=5 Tax=Hyp... [more]
A0A250XM37_9CHLO3.520e-8062.38Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8J4D4U1_9CHLO4.400e-8063.29Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
A0A7Y2SKT8_9CHLR5.880e-8063.11Pseudouridine-5'-phosphate glycosidase n=2 Tax=Chl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1497contigEcto-sp13_S_contig1497:14718..16629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score456.8
Seed ortholog evalue6.4e-126
Seed eggNOG ortholog2880.D8LLN3
Model size762
KEGG rclassRC00002,RC00017,RC00432,RC00433
KEGG koko:K16329,ko:K16330
KEGG ReactionR01055,R03315
KEGG Pathwayko00240,map00240
Hectar predicted targeting categorymitochondrion
GOsGO:0001522,GO:0003674,GO:0003824,GO:0004730,GO:0006139,GO:0006213,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009116,GO:0009451,GO:0009987,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050225,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:1901135,GO:1901360,GO:1901564,GO:1901657
Exons4
EggNOG free text desc.Pseudouridine-metabolizing bifunctional protein
EggNOG OGsCOG2313@1,KOG3009@2759
EC2.7.1.83,4.2.1.70
Cds size762
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462797.7167454-CDS-Ecto-sp13_S_contig1497:14717..149501681462797.7167454-CDS-Ecto-sp13_S_contig1497:14717..14950Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 14718..14950 +
1681462797.731063-CDS-Ecto-sp13_S_contig1497:15328..154971681462797.731063-CDS-Ecto-sp13_S_contig1497:15328..15497Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 15329..15497 +
1681462797.7399204-CDS-Ecto-sp13_S_contig1497:15824..160371681462797.7399204-CDS-Ecto-sp13_S_contig1497:15824..16037Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 15825..16037 +
1681462797.7485063-CDS-Ecto-sp13_S_contig1497:16482..166291681462797.7485063-CDS-Ecto-sp13_S_contig1497:16482..16629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 16483..16629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1497.3764.1prot_Ecto-sp13_S_contig1497.3764.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1497 14718..16629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1497.3764.1

>prot_Ecto-sp13_S_contig1497.3764.1 ID=prot_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MNRAARTLLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRAL
EEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGR
PHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLAS
LAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDI
EKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKV
GVEV
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mRNA from alignment at Ecto-sp13_S_contig1497:14718..16629+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1497.3764.1 ID=mRNA_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:14718..16629+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCGAGCAGCCCGAACGTTATTGCCCAAGGCCTCTGGAGGCCAATT GGCCTGTCTACAACATCGCGGCAGACTCCTGCCCTTGCGTAGATGTCTTG CTGCTTGGGGTTCCAGCTTGCAGATAGAGCCCGGGGTCCAACGCGCGTTG GAGGAGGGACGCCCGATCGTAGCCCTTGAATCCACGATCATATCTCACGG CATGCCGTATCCAGAAAATTTAGCTATGGCCAGGTGCGTATGCAGGACGG AGCGAGAGAGGGAGGGAGGGACAGGCACACGAGAGAGAAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGACGTGCATGCTGCAGACATTCA GCGTGTACAGAGTAGTCAATGGTCTGTGGACAACCAAAATCGTGCCGGAG TCTTGCTGGTGTCACCACCAGCACGAAGTCGTTGTCGTCGCGATGTTGTA AAATGATCTCTCGAACAGCGGCACCCTCAATGTCTCCACGTTGTAGCCAA CGGAACCAATTTCTTGCCGGGGAGGATGCAGCAGGTATGTAGGTCAACAC AGTAGAGTTCATTCCGCTTCCTTACTCAATCCCACGCCCCACCATCAAAC CTCACAAACAGGGGGGTCGAGGATATCATCAGGGAGAGAGGGGCAGTCCC CGCTACGGTGGCCGTCTTGCAGGGTCGCCCGCACGTTGGGCTCACGGCGT CTCAACTGGAGTCTCTGGCTGAAGCCGGGCCTCGCGCGAGGAAGTGCTCC AGGCGCGATCTCGCCGTCGCCCTCGCCCAGGTGCGCGCATTGGAGTCAAG AAATCACGAACGTCTGCACCAATCGCACATGTATGCATGCAGTGTTGTCG GTACGGGTACCGGCTGAACTCGTGGAGATGAAGGTGGACAACCTGGTTAT TTTGAGCGAGTACTCATGAGTATGAGGTATGGGTTCTTTAAGCGACTCGT TTTAGGAGCGACCCTACACCAAAGGCAAGTACTCTTTATCAGCGTGTTAT GTACGATCACACCAACGTCTCTTGTGTGCCTTCCTTGCTCTCACGTCCGA TTTTTTTGTCTCACTACATTGCCAATGTTCTTTGTTCTCGTGCCTCTCTT CACGAAGGGGGTCGACGGGGCCACGACCGTGGCCGCCACGTCTTACCTCG CGTCCCTGGCTGGCGTCAAGGTGTTCGTGACGGGAGGGATGGGGGGCGTC CACAGGGGGGCGGAGACGACGTTCGACGTGTCAGCCGACCTTGCCGAGCT AGCGCAGACCCCGATCGTCGTCGTGTGCGCCGGGGTAAAATCTCTCCTCG ATATCGAGAAGACTCTCGAGGTCAGTTTGAAGGATATTGTTGGCTTGCTA GGGAGCGACGCACTCGCGTGTGGTCTGTCGCTCGCTGTGTAGGTATCGCT TTTAAGTGCTTTTGACAGGCACGTCGCGTGAGGAACAGGGTTGGTGTGAT CGCTTGTGGTACTGTCACGACTTTCTCGCAGATGAAGGAAATGGATATTA TCCGTTTCAAGCCAATGTCCCAAACATGCGAGGTAGGCCCAAAGCAACCT ACTGCCTAGCTGACGCCGTCGAACGAGAATGCTCCCTTGTGGTCCCGCAT CCGCAGCAGTCGGACAAGGTGTATCACACCCGTCCCTCTCAACTTACTCT CTAATTGTTCGCCGAGAGTTTTGTTTTTGTGCAGAGGGTCGCTGTGCCCG CCTGTTCCGGCGGTATACCATCGACAGCAACTTCTCGTCAACTTCTGTCG TTGCGTGAAAACCAGGTGCTCGAGACGAACGGTGTCCCTGTGGTCTCTTT AGGCACCGATGATTTTCCAGCTTTTTTCAGCCCGTCCAGCGGGGTGCCGT CCCCGCTTAGGCTGGATACGCCTTCTGAGGTGGCGGCCGCGGCAAAGGTG GGCGTAGAAGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1497:14718..16629+

>mRNA_Ecto-sp13_S_contig1497.3764.1 ID=mRNA_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:14718..16629+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACCGAGCAGCCCGAACGTTATTGCCCAAGGCCTCTGGAGGCCAATT
GGCCTGTCTACAACATCGCGGCAGACTCCTGCCCTTGCGTAGATGTCTTG
CTGCTTGGGGTTCCAGCTTGCAGATAGAGCCCGGGGTCCAACGCGCGTTG
GAGGAGGGACGCCCGATCGTAGCCCTTGAATCCACGATCATATCTCACGG
CATGCCGTATCCAGAAAATTTAGCTATGGCCAGGGGGGTCGAGGATATCA
TCAGGGAGAGAGGGGCAGTCCCCGCTACGGTGGCCGTCTTGCAGGGTCGC
CCGCACGTTGGGCTCACGGCGTCTCAACTGGAGTCTCTGGCTGAAGCCGG
GCCTCGCGCGAGGAAGTGCTCCAGGCGCGATCTCGCCGTCGCCCTCGCCC
AGGGGGTCGACGGGGCCACGACCGTGGCCGCCACGTCTTACCTCGCGTCC
CTGGCTGGCGTCAAGGTGTTCGTGACGGGAGGGATGGGGGGCGTCCACAG
GGGGGCGGAGACGACGTTCGACGTGTCAGCCGACCTTGCCGAGCTAGCGC
AGACCCCGATCGTCGTCGTGTGCGCCGGGGTAAAATCTCTCCTCGATATC
GAGAAGACTCTCGAGGTGCTCGAGACGAACGGTGTCCCTGTGGTCTCTTT
AGGCACCGATGATTTTCCAGCTTTTTTCAGCCCGTCCAGCGGGGTGCCGT
CCCCGCTTAGGCTGGATACGCCTTCTGAGGTGGCGGCCGCGGCAAAGGTG
GGCGTAGAAGTG
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