mRNA_Ecto-sp13_S_contig1497.3764.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: D8LLN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN3_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 6.900e-156 Identity = 242/254 (95.28%), Postives = 247/254 (97.24%), Query Frame = 1
Query: 1 MNRAARTLLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKVGVEV 762
MNRAA TLL KASGGQ ACL+ RGR LPLRRCLAAWGS+LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKS+LDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAK G ++
Sbjct: 1 MNRAAATLLRKASGGQSACLRRRGRHLPLRRCLAAWGSTLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKAGFDL 254
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A835Y3Q7_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3Q7_9CHLO) HSP 1 Score: 261 bits (667), Expect = 2.270e-83 Identity = 133/209 (63.64%), Postives = 167/209 (79.90%), Query Frame = 1
Query: 112 SSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
S LQ+ P VQ AL++G+P+VALESTIISHGMP+P+NLA A VE ++RE GAVPAT+A++QG PH+G+ +QLE +A G +K SRRDL V +A+ +DGATTV+AT+ LA+LAG+ VFVTGG+GGVHRG E T DVSADL EL +TPI VVCAG KS+LDI +TLEVLET GV V + GTD+FPAFF+P SG +P R+D+P E AA
Sbjct: 8 SLLQVSPEVQAALQQGKPVVALESTIISHGMPWPDNLATALEVEAVVRESGAVPATIAIIQGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRMDGATTVSATAALAALAGIHVFVTGGIGGVHRGGEVTMDVSADLTELGRTPIAVVCAGAKSILDIPRTLEVLETQGVAVAAYGTDEFPAFFTPRSGCRAPARVDSPEEAAA 216
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A239PP55_9RHOB (Pseudouridine-5'-phosphate glycosidase n=1 Tax=Paracoccus seriniphilus TaxID=184748 RepID=A0A239PP55_9RHOB) HSP 1 Score: 258 bits (660), Expect = 1.260e-82 Identity = 136/212 (64.15%), Postives = 172/212 (81.13%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGP-RARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKV 750
L P V++AL E RP+VALESTII+HGMPYP+NL MAR VE +IR+ GAVPAT+AV+ G+ H+GLT + L++LA+ P +A K SR DLAV LA G GATTVAAT A+LAG+ VF TGG+GGVHRGAET+FDVSADL ELAQTP+ VV AG K++LD+ KT EVLET GVPV++ G D+ PAF+S SSG+P+PLR+D+P+E+AAAA++
Sbjct: 6 LTFSPEVEQALAEKRPVVALESTIITHGMPYPQNLEMARNVEQVIRDNGAVPATIAVMGGQIHIGLTDATLQALAQTPPEQAMKLSRADLAVCLANGRTGATTVAATMICAALAGISVFATGGIGGVHRGAETSFDVSADLHELAQTPVTVVAAGAKAILDLPKTWEVLETLGVPVIAYGQDELPAFWSRSSGIPAPLRMDSPAEIAAAARM 217
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: UPI000C176D93 (pseudouridine-5'-phosphate glycosidase n=1 Tax=Pararhizobium haloflavum TaxID=2037914 RepID=UPI000C176D93) HSP 1 Score: 258 bits (660), Expect = 1.620e-82 Identity = 137/206 (66.50%), Postives = 165/206 (80.10%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
LQ P V+ A EGRPIVALESTII+HGMP+P+NLAMARGVEDI+RE GA PAT+A+L G HVGLT QL +LA A K SR DLA A+A+G +GATTVAAT +A+LA + +F TGG+GGVHRGAE++FD+SADL ELA+TP++VVCAG K++LDI KTLEVLET GVPVV+ G D FPAF+S SG+ SPLRLDTP +A
Sbjct: 11 LQFSPAVEAARREGRPIVALESTIITHGMPFPDNLAMARGVEDIVREEGAEPATIAILDGTVHVGLTDDQLAALARAED-VLKVSRADLAFAVAEGRNGATTVAATMIVAALADISIFATGGIGGVHRGAESSFDISADLEELARTPVLVVCAGAKAILDIPKTLEVLETRGVPVVTFGADRFPAFWSRDSGLGSPLRLDTPDAIA 215
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A150GKH1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKH1_GONPE) HSP 1 Score: 259 bits (661), Expect = 1.670e-82 Identity = 130/212 (61.32%), Postives = 167/212 (78.77%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKVG 753
+++ P VQ AL EGRP+VALESTIISHGMP+P+NLA A VE ++R+ GA PAT+A+++G PH+G+ +QLE +A G +K SRRDL V +A+ +DGATTV+AT+ LA+LAG++VFVTGG+GGVHRG E T DVSADL EL +TP+ VVCAG KS+LDI +TLEVLET GVPV + GTD+FPAFF+P SG +P R+D+P E AA G
Sbjct: 7 IRVSPEVQAALAEGRPVVALESTIISHGMPWPDNLATALEVEGVVRDSGATPATIAIIEGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRLDGATTVSATAALAALAGIQVFVTGGIGGVHRGGEATMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEVLETLGVPVAAYGTDEFPAFFTPRSGCQAPARVDSPKEAAALLDAG 218
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A7S2TTA8_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTA8_9EUKA) HSP 1 Score: 254 bits (649), Expect = 1.780e-80 Identity = 133/238 (55.88%), Postives = 177/238 (74.37%), Query Frame = 1
Query: 22 LLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
+LP+A+G R + ++ ++ + + P VQ AL++G+P+VALESTIISHGMPYP+N+ AR VED++R+ GA PAT+A+L G+ VGLT++QLE L G + RKCSRRDLA+ +AQ +GATTVAAT YLA LAG+ VFVTGG+GGVHRG E++ D+SADL EL +T + VVCAG KS+LDI +TLE LET+GVPVV T FPAFF+ SG P+PL L++P+E+A
Sbjct: 18 VLPEATG-------ERSGAMEVKTSASSPHPMINLSPEVQTALKQGKPVVALESTIISHGMPYPQNVNTARRVEDVVRKYGATPATIAILDGKVLVGLTSNQLEKLGTLGSKCRKCSRRDLALVVAQKGNGATTVAATMYLAKLAGISVFVTGGIGGVHRGVESSMDISADLTELGKTSVTVVCAGAKSILDIPRTLEFLETHGVPVVGYQTKHFPAFFTRESGCPAPLTLNSPAEIA 248
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: G4R5Y7_PELHB (Pseudouridine-5'-phosphate glycosidase n=5 Tax=Hyphomicrobiales TaxID=356 RepID=G4R5Y7_PELHB) HSP 1 Score: 252 bits (644), Expect = 3.120e-80 Identity = 129/207 (62.32%), Postives = 160/207 (77.29%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
L+I P ++ AL +G+P+VALESTII+HGMPYP+NL A VE ++R+ GAVPAT+AV+ G+ HVG+ LE LA G +A K SRRDLA L +G+ TTVA T +A++AG+KVF TGG+GGVHRGAE+TFD+SADL EL+QTP+ VVCAG KS+LDI KTLEVLE+NGVPV+ GTD FPAFF+ SG RLDTP EVAA
Sbjct: 5 LEISPEIKYALADGQPVVALESTIITHGMPYPQNLETALAVEQVVRDNGAVPATIAVMGGKCHVGVAGETLEELARTGLKAAKASRRDLAAILVKGLTAGTTVATTMQIAAMAGIKVFATGGIGGVHRGAESTFDISADLTELSQTPVAVVCAGAKSILDIPKTLEVLESNGVPVIGYGTDAFPAFFARESGHGVDYRLDTPDEVAA 211
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A250XM37_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XM37_9CHLO) HSP 1 Score: 253 bits (645), Expect = 3.520e-80 Identity = 126/202 (62.38%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 130 PGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
P V RAL+EGRP+VALESTIISHGMPYP+N+ A VE+++ ++GAVPAT+A++ G+P +GLT QLE +A+AGP RK SRRDL + +A+G+DGATTV+AT LA+ +G+ VFVTGG+GGVHRG E+T D+SADL ELA+TP+ V+CAG KS+LDI +TLE LET+GV V + TD+FPAFF+ SSG +P R D+P EVA
Sbjct: 12 PEVARALQEGRPVVALESTIISHGMPYPQNIQTATEVEEVVSQQGAVPATIAIIGGKPCIGLTREQLEHIAKAGPAVRKVSRRDLPLVIAKGLDGATTVSATMLLAARSGINVFVTGGIGGVHRGGESTMDISADLTELARTPVAVICAGAKSVLDIPRTLEFLETHGVTVTAYQTDEFPAFFTRSSGCKAPCRSDSPLEVA 213
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A8J4D4U1_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4D4U1_9CHLO) HSP 1 Score: 253 bits (647), Expect = 4.400e-80 Identity = 131/207 (63.29%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAA 738
L+I P VQ AL EGRPIVALESTII+HGMP+P+NL+ A VE+++R GAVPAT+A+++G PH+G+ QLE +A G +K SRRDL V +A+ +DGATTV+ATS LA+LAG+ VFVTGG+GGVHRG E D+SADL EL +TPI VVCAG KS+LDI +TLEVLET GV V S GT++FPAFF+P SG SP R+D+P+E AA
Sbjct: 6 LEISPEVQAALSEGRPIVALESTIITHGMPWPDNLSTALEVEEVVRASGAVPATIAIIKGVPHIGMQREQLEYIARNGTAVQKVSRRDLPVVMAKQLDGATTVSATSALAALAGIHVFVTGGIGGVHRGGEINMDISADLTELGRTPIAVVCAGAKSILDIPRTLEVLETWGVAVASYGTNEFPAFFTPRSGCRSPARVDSPAEAAA 212
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Match: A0A7Y2SKT8_9CHLR (Pseudouridine-5'-phosphate glycosidase n=2 Tax=Chloroflexales TaxID=32064 RepID=A0A7Y2SKT8_9CHLR) HSP 1 Score: 251 bits (642), Expect = 5.880e-80 Identity = 130/206 (63.11%), Postives = 163/206 (79.13%), Query Frame = 1
Query: 118 LQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSLLDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVA 735
L+I + AL+EGRPIVALEST+ISHG+PYP+NL +AR +ED +R GAVPATV V G P VG+ A+++E A + RK SRRD+A A+AQG DGATTVAAT LA+ AGV+VF TGG+GGVHRGAE T+D+SADL ELA+TP++VVCAG K++LD+ TLE LET GVP+V LGTD+FPAF+S SSG+P P R + P+EVA
Sbjct: 2 LRISAELTAALDEGRPIVALESTVISHGLPYPQNLELARAMEDEVRAAGAVPATVGVSAGVPTVGMAAAEIERFATRSAQVRKLSRRDVAAAIAQGADGATTVAATMALAAAAGVEVFATGGIGGVHRGAELTWDISADLTELARTPVIVVCAGAKAILDLSATLEYLETLGVPLVGLGTDEFPAFYSRSSGLPVPARANDPAEVA 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1497.3764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1497.3764.1 >prot_Ecto-sp13_S_contig1497.3764.1 ID=prot_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MNRAARTLLPKASGGQLACLQHRGRLLPLRRCLAAWGSSLQIEPGVQRALback to top mRNA from alignment at Ecto-sp13_S_contig1497:14718..16629+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1497.3764.1 ID=mRNA_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1912bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:14718..16629+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1497:14718..16629+ >mRNA_Ecto-sp13_S_contig1497.3764.1 ID=mRNA_Ecto-sp13_S_contig1497.3764.1|Name=mRNA_Ecto-sp13_S_contig1497.3764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:14718..16629+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |