mRNA_Ecto-sp13_S_contig1497.3763.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1497.3763.1
Unique NamemRNA_Ecto-sp13_S_contig1497.3763.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5KQ71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ71_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 2.420e-142
Identity = 321/484 (66.32%), Postives = 336/484 (69.42%), Query Frame = 2 
Query: 1256 MSGQEEELVDFEHEKDQQQDXXXXXXXXXXXXXXXDEEDELRIWRSPRSRLAPMKALLQDASSEDLSAAFRNGDITLRDIVSTCLSSDVPRPVPPFELDMSQEEISRFPRDDYDALLQLSEHWHGRVTEDLRAEAESVAEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXQFEERVRQVQAIMARTNRLRAGVLPEEPGTPTLFPSPVSPSXXXXXXXXXXXXXXPRPVGHPRMPRAQASIDSSRGTGAMESGRPVDTPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPASSTSDEDNTSHRSASGRGSGDGV 2707
            MSGQE+ELVDFEHEKDQQQD               D EDE RIWR PR RLA ++ALLQDASSEDLSAAFR+GDITLRDIVSTCLSSDVPRPVPPF+LDMS EEISR P DDYDALLQLSEHWHGR+TE+LRAEAE+VAEKA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXQFEER+RQ                                                   GH                                                       RQSADIAFLHRSVGMPSRDVTFH QDQ DADTAWGACRQ VLDAVRPTPIS VTF TLFNKGFIKKLTPFQQ+NVFRLAHALRRATFRD  QGS LV P G  QPPLNRAA TTDQR+ITSSNYGKA QRDS HF+RGSGEGRNHSEF APASSTSDED+TSH+SASG GSGDG+
Sbjct:    1 MSGQEKELVDFEHEKDQQQDQGPQRSSGGSGSSSEDVEDESRIWRRPRFRLARVQALLQDASSEDLSAAFRDGDITLRDIVSTCLSSDVPRPVPPFDLDMSHEEISRLPPDDYDALLQLSEHWHGRLTENLRAEAEAVAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFEERLRQ---------------------------------------------------GH-------------------------------------------------------RQSADIAFLHRSVGMPSRDVTFHHQDQSDADTAWGACRQVVLDAVRPTPISQVTFGTLFNKGFIKKLTPFQQQNVFRLAHALRRATFRDEPQGSILVTPSGGLQPPLNRAASTTDQRDITSSNYGKATQRDSSHFSRGSGEGRNHSEFTAPASSTSDEDSTSHKSASGCGSGDGL 378
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5KRB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB0_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.730e-99
Identity = 262/338 (77.51%), Postives = 268/338 (79.29%), Query Frame = 2 
Query:  236 MDESTGKNSGKRKDKTRSKKPGKNAHNVRMDGEPSRSSKHPQYHKKRPHPPGESGKKXXXXXXXXXXXXXXXXXXXPPSSSSLSRRVDDIRLVLDSTPSDEELAKKVRGVVLELEAVDRALADEGTYLGIVDKAELEKRRYILVKRRFVLREERELGQKLRVEVKKAEEERAAAERSERQPSLSPGSKSXXXXXXXXXXXXXXXXXXXX-PPTRAPAAPAAQAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPRTSMYQPSSSKTGGGDIGEFIKKNSAAMGKELAGVRPSSSAGTTAAGRTSTSAGSGVT 1246
            MDESTGK SGK KDKTRSKKPGKNAHN  + G+PS SSKHPQYHKKR HPPGESGKK                   PPSSSSLSRRVDD+RLVLDSTPSDEELAKKVR VVLEL+AVDRALADEGTYLGIVDKAELEKRRYILVKRRFVLREERELGQKLRVEVKK E  RAAAERSERQ SLSPGSK XXXXXXXXXXXXXXXXXXXX PPTRAPAAPAAQAP XXXXXXXXXXXXXXXXXXXXXXXXXX                          SKPRTSM QPSSSKTGGGDIGEFI KNSAAMGK+LAG RPSSSAG+TAAG       SGVT
Sbjct:    1 MDESTGKISGKHKDKTRSKKPGKNAHNAHVHGKPSSSSKHPQYHKKRLHPPGESGKKRVATTPSH-----------PPSSSSLSRRVDDMRLVLDSTPSDEELAKKVRDVVLELKAVDRALADEGTYLGIVDKAELEKRRYILVKRRFVLREERELGQKLRVEVKK-EXXRAAAERSERQASLSPGSKXXXXXXXXXXXXXXXXXXXXXXPPTRAPAAPAAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPT----------------------SKPRTSMDQPSSSKTGGGDIGEFITKNSAAMGKKLAGARPSSSAGSTAAGXXXXXXXSGVT 304
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: D8LLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN2_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 7.810e-46
Identity = 106/166 (63.86%), Postives = 109/166 (65.66%), Query Frame = 2 
Query:  236 MDESTGKNSGKRKDKTRSKKPGKNAHNVRMDGEPSRSSKHPQYHKKRPHPPGESGKKXXXXXXXXXXXXXXXXXXXPPSSSSLSRRVDDIRLVLDSTPSDEELAKKVRGVVLELEAVDRALADEGTYLGIVDKAELEKRRYILVKRRFVLREERELGQKLRVEVKK 733
            MDESTGKNSGK KDKTR KKPGKNAHNV M G+P  SSKHPQYHKKRPHPPGE                                                ELAKKVR  VLEL+AVDRALADEGTYLGIVDKAELEKRRYILV+RRFVLREEREL QKLRVEVKK
Sbjct:    1 MDESTGKNSGKHKDKTRRKKPGKNAHNVHMRGKPCSSSKHPQYHKKRPHPPGE-----------------------------------------------RELAKKVRDAVLELKAVDRALADEGTYLGIVDKAELEKRRYILVRRRFVLREERELVQKLRVEVKK 119
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5KIU6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU6_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.950e-21
Identity = 173/493 (35.09%), Postives = 234/493 (47.46%), Query Frame = 2 
Query: 1394 PRSRLAPMKALLQDASSED---LSAAFRNGDITLRDIVSTC-LSSDVPRPVPPFELDMSQEEISRFPRDDYDALLQLSEHW----HGRVTED------LRAEAESVAEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXQFEERVRQVQAIMARTNRLRAGVLPEEPGTPTLFPSPVSPSXXXXXXXXXXXXXXPRPVGHPRM-------PRAQASIDSSRGTGAMESGRPVD-------------TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPAS---------------STSDEDNTSHRSASGRGSGDGVTGGTQG 2725
            P S +  +  LL + ++ D   L  A+  G ++L DIV    LSSD P  VPPF L   ++ +   P D++ A  +L+E W     G++ E        R +AE +AE+ A           XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX      ER   +QA  A+   LR+ +   EP                           PR   HPR         ++Q  + S R     E  R V              TP F VTLG  +  + DG         Y+    D AFL R + MP+  VTFH++D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +        +AP++ S     GSGE ++ S  AAP S               S +D+ + S +S+ GRG GD   G T G
Sbjct:   93 PMSMVFTVDDLLDNIATADPAELERAYNTGRVSLEDIVEAAHLSSDSPLFVPPFSLP-PEDRLILLPHDEFMAYQRLNEMWCDGLAGKIAEAEAREQAKREDAERLAEREAALAAAARKQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----EREAYLQAARAKQGALRSRLKELEP-----------------------RHQDPRAAPHPRRRVIVPPPTQSQVHLGSHRTASPHEKEREVAASPTNEQERKRTATPEFSVTLGLPAGAE-DGASFAAATTVYEFHVGDTAFLSRPLEMPAEGVTFHDEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFPEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----QAPRQASSRPAHGSGEDKDFSRSAAPVSKSWKNRWGDRDSTAKSGTDDHHRSTQSSRGRGVGDNRRGRTVG 548
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5JWW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW7_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.560e-19
Identity = 84/225 (37.33%), Postives = 117/225 (52.00%), Query Frame = 2 
Query: 2096 TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPASST-----SDEDNTS-------HR---SASGRGSGDGVTGGTQG 2725
            TP F VTLG  +  + DG         Y     D AFL R + MP++ VTFH++D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +         AP++ S     GSGE ++ S+ AAP S +      D D+T+       HR   S+ GRG GD   G T G
Sbjct:   11 TPEFSVTLGLPAGAE-DGASFAAATTVYVFHVGDTAFLSRPLEMPAQGVTFHDEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----PAPRQASSRLAHGSGENKDFSKSAAPVSKSWKNRSGDRDSTAKSRTDDHHRFTQSSRGRGVGDHRRGRTVG 227
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5KH34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH34_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.610e-18
Identity = 84/225 (37.33%), Postives = 117/225 (52.00%), Query Frame = 2 
Query: 2096 TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPASST-----SDEDNTS-------HR---SASGRGSGDGVTGGTQG 2725
            TP F VTLG  +  + DG         Y+    D AFL R + MP+  VTFH++D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +        +AP++ S     GSGE ++ S  AAP S +      D D+T+       HR   S+ GRG GD   G T G
Sbjct:  254 TPEFSVTLGLPAGAE-DGASFAAATTVYEFHVGDTAFLSRPLEMPAEGVTFHDEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----QAPRQASSRPAHGSGEDKDFSRSAAPVSKSWKNRWGDRDSTAKSGTDDHHRFTQSSRGRGVGDNRRGRTVG 470
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5KRJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ8_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.170e-18
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 2 
Query: 2096 TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPAS 2641
            TP F VTLG  +  + DG         Y+    D AFL R + MP+  VTFH++D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +        +AP++ S     GSGE ++ S  AAP S
Sbjct:  446 TPEFSVTLGLPAGAE-DGASFAAATTVYEFHVGDTAFLSRPLEMPAEGVTFHDEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----QAPRQASSRPAHGSGENKDFSRSAAPVS 619
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5K020_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K020_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.000e-18
Identity = 84/225 (37.33%), Postives = 116/225 (51.56%), Query Frame = 2 
Query: 2096 TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPASST-----SDEDNTS-------HR---SASGRGSGDGVTGGTQG 2725
            TP F VTLG  +  + DG         Y+    D AFL R + MP+  VTFH +D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +        +AP++ S   T GSG  ++ S  AAP S +      D D+T+       HR   S+ GRG GD   G T G
Sbjct:  162 TPEFSVTLGLPAGAE-DGASFAAATTVYEFHVGDTAFLSRPLEMPAEGVTFHNEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----QAPRQASSRPTHGSGGDKDFSRSAAPVSKSWKNRWGDRDSTAKSGTDDHHRFTQSSRGRGVGDNRRGRTVG 378
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5K5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I1_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 9.060e-17
Identity = 170/493 (34.48%), Postives = 230/493 (46.65%), Query Frame = 2 
Query: 1394 PRSRLAPMKALLQDASSED---LSAAFRNGDITLRDIVSTC-LSSDVPRPVPPFELDMSQEEISRFPRDDYDALLQLSEHW----HGRVTED------LRAEAESVAEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXQFEERVRQVQAIMARTNRLRAGVLPEEPGTPTLFPSPVSPSXXXXXXXXXXXXXXPRPVGHPRM-------PRAQASIDSSRGTGAMESGRPV-------------DTPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAPASST-----SDEDNTS-------HR---SASGRGSGDGVTGGTQG 2725
            P S +  +  LL + ++ D   L  A+  G ++L DIV    LSS     VPPF L  S++ +   P D++    +L+E W     G++ E        R +AE +AE+ A           XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX      ER   +QA  A+   LR+ +   EP                           PR   HPR         ++Q  + S R     E  R V              T  F VTLG  +  +  G      +  Y+    D AFL R + MP+  VTFH++D+  A  AW   +Q V  A  P P + V F  ++   ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D +        +AP++       GSGE ++ S  AAP S +      D D+T+       HR   S+ GRG GD   G T G
Sbjct:  101 PMSMVFTVDDLLDNIATADPAELERAYNTGRVSLEDIVEAAHLSSGSFLFVPPFSLP-SEDRLILLPHDEFIVYQRLNEMWCDGLAGKIAEAEAREHAKREDAERLAEREAALAAAARKQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----EREAYLQAARAKQGALRSRLKELEP-----------------------RHQDPRAAPHPRRRVIVPPPTQSQVHLGSHRTASPHEKEREVAASPTNEQERERTTTLEFSVTLGLPAGAE-GGASFAAAITVYEFHVGDTAFLSRPLEMPAEGVTFHDEDRLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYRTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTNDFKHDL-----QAPRQAPSRPAHGSGEDKDFSRSAAPVSKSWKNRWGDRDSTAKSGTDDHHRFTQSSRGRGVGDNRRGRTVG 556
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Match: A0A6H5JT78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT78_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.900e-15
Identity = 58/144 (40.28%), Postives = 81/144 (56.25%), Query Frame = 2 
Query: 2096 TPRFFVTLGGTSRPDPDGVHEKDVLAPYDRQSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPISHVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGGVSQPPLNRAAVTTD 2527
            TP F VTLG  +  + DG         Y+    D AFL R + MP+  VTFH++D+  A  AW   +Q V  A  P P + V F  +++  ++ KL P  +++VF+L  ALRRATF +G QG+++V   G  Q PL RAA T D
Sbjct:  346 TPEFSVTLGLPAGAE-DGASFAAATTVYEFHVGDTAFLSRPLEMPAEGVTFHDEDKLAALFAWAGIKQLVR-AQFPPPHT-VAFGHIYHTPYLAKLPPSSRQSVFQLLFALRRATFHEGPQGTSVVTQEGGLQLPLARAASTND 486
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1497.3763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KQ71_9PHAE2.420e-14266.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRB0_9PHAE1.730e-9977.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN2_ECTSI7.810e-4663.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIU6_9PHAE3.950e-2135.09Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW7_9PHAE2.560e-1937.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH34_9PHAE1.610e-1837.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRJ8_9PHAE5.170e-1838.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K020_9PHAE9.000e-1837.33NADAR domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5K5I1_9PHAE9.060e-1734.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT78_9PHAE1.900e-1540.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1497contigEcto-sp13_S_contig1497:4236..14490 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3598
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-04_005100.1
Cds size3363
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1497.3763.1prot_Ecto-sp13_S_contig1497.3763.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1497 4236..14255 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462797.6126459-CDS-Ecto-sp13_S_contig1497:4235..47161681462797.6126459-CDS-Ecto-sp13_S_contig1497:4235..4716Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 4236..4716 -
1681462797.6268258-CDS-Ecto-sp13_S_contig1497:5076..69461681462797.6268258-CDS-Ecto-sp13_S_contig1497:5076..6946Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 5077..6946 -
1681462797.6416428-CDS-Ecto-sp13_S_contig1497:12095..126081681462797.6416428-CDS-Ecto-sp13_S_contig1497:12095..12608Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 12096..12608 -
1681462797.6512601-CDS-Ecto-sp13_S_contig1497:12901..130011681462797.6512601-CDS-Ecto-sp13_S_contig1497:12901..13001Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 12902..13001 -
1681462797.6593833-CDS-Ecto-sp13_S_contig1497:13856..142551681462797.6593833-CDS-Ecto-sp13_S_contig1497:13856..14255Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1497 13857..14255 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462797.6727505-UTR-Ecto-sp13_S_contig1497:14255..144901681462797.6727505-UTR-Ecto-sp13_S_contig1497:14255..14490Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1497 14256..14490 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1497.3763.1

>prot_Ecto-sp13_S_contig1497.3763.1 ID=prot_Ecto-sp13_S_contig1497.3763.1|Name=mRNA_Ecto-sp13_S_contig1497.3763.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1121bp
MDESTGKNSGKRKDKTRSKKPGKNAHNVRMDGEPSRSSKHPQYHKKRPHP
PGESGKKKRVATPEESSKKRVATTPSPPSSSSLSRRVDDIRLVLDSTPSD
EELAKKVRGVVLELEAVDRALADEGTYLGIVDKAELEKRRYILVKRRFVL
REERELGQKLRVEVKKAEEERAAAERSERQPSLSPGSKSSSGNKNGGNNS
SVTTAQQSSPPTRAPAAPAAQAPALAPAPAPAPAPAPAPAPAPAPAPAPA
PAPARAPAPAPAPAPAPAPAPAVSPTSKPRTSMYQPSSSKTGGGDIGEFI
KKNSAAMGKELAGVRPSSSAGTTAAGRTSTSAGSGVTEERMSGQEEELVD
FEHEKDQQQDQRPQRSSGGSGSSLEDEEDELRIWRSPRSRLAPMKALLQD
ASSEDLSAAFRNGDITLRDIVSTCLSSDVPRPVPPFELDMSQEEISRFPR
DDYDALLQLSEHWHGRVTEDLRAEAESVAEKAAAEEAAAAAAARAEAEQV
AAEQAAAKQAAAEEADAAATAAAVEEKAAAEQAQFEERVRQVQAIMARTN
RLRAGVLPEEPGTPTLFPSPVSPSPSAVSPRPPLSSPHPRPVGHPRMPRA
QASIDSSRGTGAMESGRPVDTPRFFVTLGGTSRPDPDGVHEKDVLAPYDR
QSADIAFLHRSVGMPSRDVTFHEQDQPDADTAWGACRQFVLDAVRPTPIS
HVTFSTLFNKGFIKKLTPFQQRNVFRLAHALRRATFRDGHQGSTLVPPGG
VSQPPLNRAAVTTDQREITSSNYGKAPQRDSFHFTRGSGEGRNHSEFAAP
ASSTSDEDNTSHRSASGRGSGDGVTGGTQGSPRNPRGERWGDLPPTDNIQ
STAARSKKPRSERWGDLPPTDNSRSTAAPSRKPGGERWGDLPPTDKTRST
AVPSRKPGSKRWGDLPPTDNTRSTAAPSSKPDGERWGDLPPTDNTRSTAA
PSTKPGSERWGDKPPTESTRPTVVPSRKPGSERWRDQPPTDSTRSTAACH
LGGKNIENEDRRRSNRSPPVRLCGRSRSRSAGRSRTHRSPPARRRSSSRN
RSEDRSRANRSTVGRRRNWSRSRSKDRSRANRSTSRRRRSRSRTRTEDRS
MATSRGNGRWCRSEAEAQQR*
back to top

mRNA from alignment at Ecto-sp13_S_contig1497:4236..14490-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1497.3763.1 ID=mRNA_Ecto-sp13_S_contig1497.3763.1|Name=mRNA_Ecto-sp13_S_contig1497.3763.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:4236..14490- (Ectocarpus species13 EcNAP12_S_4_19m)
CTACACAGCACAGCAGTGCTAGTGCTACGAGGCCATCGCCACCGCACCCA
TAGCAGACCCGTCACTCACGACACAACTACGCTCACACCGCATTCGTTGA
TTGTGCGCGTGTTAGGTAGCCTGAAAGAAAAGCGGGCCCCATCGCGTAAC
TCGCCAGCAACCTCAAACACTGGAGCGCCGGCCTGCCCGACTTCACTTAA
CACTCGTTGTTTGAGACACGATTCGGTAGTGGAGTATGGACGAGAGCACG
GGGAAGAACAGTGGCAAGCGTAAGGACAAGACCAGGAGCAAGAAACCAGG
CAAGAATGCGCACAATGTTCGCATGGACGGCGAACCCAGCAGGAGCAGCA
AACACCCCCAGTACCACAAGAAGAGGCCGCATCCGCCGGGGGAGAGTGGC
AAGAAAAAAAGAGTCGCCACGCCGGAGGAGAGTAGCAAGAAAAGGGTCGC
CACGACCCCGTCCCCTCCTTCTTCTTCGTCGTTGTCCCGCCGTGTGGATG
ATATACGGCTGGTGCTCGACTCCACCCCCTCTGATGAGGAACTGGCGAAG
AAGGTGCGCGGTGTCGTTTTAGAGCTAGAGGCCGTGGACCGAGCCCTGGC
CGACGAAGGCACGTACCTGGGTATCGTGGACAAGGTGAGCAAATCTACGC
CGGGCGGGCTGGAATATTAAGAGCATGCCTCGATAAACAACCGCAGCAGC
AGCAGCAGATGGCGTTGGACGTGTGTAGCCGCACGCACAAACGTATGGTT
CTTTACTCACCATAACTGAGTAATGCCCTGTACAAAAGAGAGTGTTGAAG
CTAACGTTTGGAATCTTCATGCCTTACACGTTGGCCTATTCGTAGCAATT
TTTGTTGCCGCTGACATCATGGTCCCTCGTTTTTACGTGTGTTTCCAGGA
CTTCGATGTGTGTCTCTCCCCTCCACTCTCGCGCGTGTGCGCAACTCCCT
TTGCGGTGCCATATGGTGCGAGATGTTGACGCTTGCGCTGTAAGAGCAGG
ATGAACGAATCTACTAGTCCCCCAAGTCATGATCCTATGTGTGTGTGCGG
CGTCTGTCGAACCATGTGGCACATCGATTGACTTGATGTGGTCGCGTGAG
TGCTGTTGCTGCTGCTGCCAAGAGTGTGTTACGCTCTCCCTCCTCCCATT
TCCTCATCAATACCACGGCGTCACTGATGGCCCCTGCTGTGCTGTGCGTG
TGCTATTGGCGGGCACCAAGACACGTGTTTCTTTGCGGCATTCGTGCGTG
TGTTTCACATATGGTGTGTCTAACGTACATGTGTTGTCTAGGTAGATGTG
GGTTTTCTTCGCGTGCGTGAACCGGTGTGCTCTTGGCCCCATGGAAGGCC
AATAGAGAAGTTAGTCGTATGGCACATGCCAATTTCAAGCTCCACCGTAT
GAGATTTTATCTACCGCGTGTTGTATCGTGTGCATCAAACAAGAATTTTG
TATCATCGTCGATATTCCCTCATCACGCTCGACAACCAGGCCGAGCTCGA
GAAACGGAGGTACATTCTGGTGAAGAGGCGCTTCGTCCTCAGGGAGGAAA
GGGAGTTGGGGCAGAAACTTCGCGTCGAGGTTAAGAAAGGTGCGAGGGCG
GCGCCTAGTGACGGTCTGCAGCACGCTTATGGCCTCACTTTCTTGTCGCT
TGAAGGATGCACTTGTGGTCGCTCGCTCCGTCCGGCCGTAGGGTTGTTTG
CTTTGCAGTTTGAAAACGTCTGGAGGCAAGCCGTGGAGCATATCTTCTCG
CCACAAGTACACACCAGAGTGCCCGGCCTACTCAGCAGCAAGACGTGAAC
CTTTTTATCTACATATGCGTCACAACTCGTCCCGTTCTTACCGGACGGTC
TACCATGAAACGTCTCGCTCCCGCTCCAAAAGCAGAGGAAGAGCGCGCCG
CGGCCGAGCGAAGTGAACGGCAACCATCCTTGTCCCCAGGGTCCAAAAGC
AGCAGCGGCAACAAGAACGGCGGCAACAACAGTAGCGTCACCACAGCACA
ACAATCTTCCCCGCCAACCCGAGCACCAGCAGCGCCAGCAGCACAAGCAC
CGGCACTAGCACCAGCACCGGCACCAGCACCGGCACCGGCACCAGCACCG
GCACCGGCACCAGCACCAGCACCAGCACCGGCGCCAGCGCCGGCACGAGC
ACCGGCACCAGCGCCGGCACCGGCACCGGCACCAGCACCAGCACCAGCAG
TATCGCCAACGTCGAAACCTCGTACCAGCATGTATCAGCCATCGTCCTCG
AAGACCGGCGGTGGGGACATCGGGGAGTTCATAAAAAAGAACTCGGCCGC
GATGGGGAAGGAGCTGGCCGGAGTGAGGCCTTCCTCGTCGGCGGGCACGA
CCGCTGCTGGAAGAACTAGCACCTCGGCTGGCAGTGGCGTCACGGGTAAG
TCTCTCTGATTCGTGTTTGGTCGATTGCTAATGGTAAGCGGCGGCCGCAA
CGCAACGGGCCGAACAGAGCCTTTGTCAACGGATGGAAAGAGCCGGTTGG
AGCGGGTGCAAGACCATGTCGGAGCACGGCGGGTGCTCGCTGAAGCGAAG
GCCATTGCTTGTCTGCTCGTGTTAGGTTTGGGGCTGTTGATCATGTTGAA
TTAGCCCGGAAGTCCATGATAACTCGCTAGTCCATGGTTCGAGAGGTTTT
GCCCGTATGGTGTGGTACTGTTTGAGGTAAGCAGGAACCATCCATAGGGC
GATACTAGACAACAGCCCCGAGGATCTGGTTGGCGGTGTCAGCAGGGCAG
CCTTGCCCTATTCGTGTCGCATGTACATAGATTACTGTTGGACTTGATAG
ATATGACGAGGCAGAGATGGGGAGCGCGAACCTTCTTCCTTTCTGCCACT
CTTCCGGCGCTCAACTAGATGAGGCCCAGTGCCAATTAAAGTGAGTCAAA
AAACAGCTCTGCTTCGACTTCGCCGCTTCCTACCGCACTTGCCGTTTCCG
GCTTCGATACTGCTGGTAGCCCAACTAGACCTCTTAGCTCGCGCTGCGAC
CGTGTCAACCTGCTTGGCGAGGCGGCACCAATTTTTACCAATTGTCGCAA
AAACTCCTGTGGTTGTGGATTCCCACCCGATCCCAGCTTCGCTGCTGTTA
ACCCATGATATATCGCCACCTGCCTTCATGGAAATTATCATCGATGATAG
TACATGCAGCACATTCGTGGCTGATTCGCCTCCCTAAACTGTGCTAGCTC
CTCGGTTGCGGACACTTTCCCCGCGGTCCGCACGTCTATGAGTTCAGCTA
CATGTCCACACGGTGAAAAGCAGGAGATCCCCAACGCAACTCCGGCCGTG
CCGTTGAGAGCGCGTTTGGTGCGTGCTGGGTGCACCAATCTCCGGCTCTG
CCGACTTGAGCAACACCGCCTCCGGAGCATCCGTCGGACACGTCCCTCCG
CTGTCAGCAGCACACTGGAAATCAAGCCTGAACACCCCGATCAACCTGTT
CGGGTATGCCTCTCTGACGGGTCGCGCATGTGATTGAGAGAGATACTCAC
CGCAAGTTGCCCCCGGCGCACGCAACAAGTTGCCGCGGAAGAACATGCAA
ACTTGGGCCCATCGCCGGTCACTGCCGCAACGATTTGTGGCGACGATGGC
ATGCCCCCCTGCTCTCGTGACCATGCTTTTTTTGTTGCTGGATTACAGAG
TGGTTACCACCAATGAATATCAAATCGGTGACACAGCCCACACCGCTGAC
GAAGTCACATGAGCGCCAGCAACGCGCAACGTAGATGAAGGTGTACTAGG
TGGAGCCGCCAGCAACCCGCCCTGAAATAGACGTCGCGCACCCACTTTCG
TGTTGACAGCGACACTATTGCTATACTGGTAGTTGAAGGCACACCGTCGG
TGCCCATGTTGGTTCCTGCTGTGACGATTGCTGCTTTGCCCTCTCTCGCT
GTTTTTCAGCTACGCATGTCCACCTACGCACGCCGCCATCCCTAACGCCC
GGACACCTCCCGCAAACACCGACAGAGGCTGCCGTCCAACCGCTGGTCGA
CATCATGACGGACTTTGCAGACAACGCTGGAAGCGGCCGCATACGCCTGC
ACCACAAGCAGTTCCCTCCGGCTTCGCCGTTGAGATCGATTGTCCCAAAT
CTTACTCCGGCTTTGCCGTGGAGTTCCCCCCCTCCGGTCCACCCGTTGGG
CATTCAGACCCACGAAGAAATTCCGGTAGCACCGTCCGAGCCCGTCGCTG
CTCGCTTTTGGCTGGCCATAATTGAACACGATCCGATTGGGACACACTTC
CCAAAAGATCACGCTGGCGCCACCTTTCATTCCGTACGGCCGTCGCCGAA
ACCCACGCGGCCGCTCATGCCAAATTAGCTTCGTCCCGAGGACGGCGGGA
TTCTCGCCGGGGACGATATGGCTCCGCTTCAGGCCGTGGGAGACGGGGCT
CCAGCTCCGCTCCCGGCCGTGAAAAGAGGGAGCGCTAGCTCAACCGGTTC
GTCCAGCGCAGCCCGCGGGGCCCGCCAGTCCTTCACAACAACCTTCTCGG
GCGGTGAGGCAGGACGGAAGAGTGACAAGCGCATCCGCCGCGACTCCTCC
GGACGCCCCAAGAAGAAACCTGCGGTAAAGATCGCCTAGTTCCCAAGATC
CGCAAGGCCCGCAACACCGACCGCTAAGGAGGCGATGTCCACCGTGCAGA
CAAACCCCAAAGTCGTAGCGGAGGAAACACCGGCGCTAGGTAACACACCC
CACCTCACTGCAAGCGCATCCGCTCCTCCTGCAGAGGAAGTAATCACGGT
CCTTGTTGCCACCATCGCAGCGGCAGCTCCAGTAGCAGGTTCAGCAACGA
CAACATTGCTGCCTCAGTGCACGGTGGGCCTCACACTAGCCACTGCCGCA
GCGCTTTGAAGGGCTCCAAGCACAGGCAAGCTCCTTTTCGTTCGGAGATA
GATCGGAACCAAACTTCAAGCCTCAAAGACACGATTTAAATTATCCCCGA
TTTGGCTGATGATTTTTGCGCTTGCGTACAGCGCGACCACCGGACATTGG
GGATCTAGATGGAATTAACCCCTTGTAATTTTTCACCCCTATCCTTCCTT
CAACCTCTGTGATTACCAGCGGCTCTCACAAATGTTTGGACAACTCCCTA
TTGACTCCGACAGACTCAGGTGCCCCGCAACAGCTCAGCCGTTTGGGGAA
CCTGATACTCAATACGGATCTACGGAGATTCCGGGGGTCCCGTGGATATG
TGTTGCTAGGGTAGTTGGGAGACAACCCCGCCAGCAGAGCTCCACGCTCT
GTCTCTCTCTCGGATCCCTAATCTCTTCTATTACCATGGTATATATCAAC
GTTCTTGGGATCAACGGTTTGCTTCCCGAGCTGGTGACAACAAGCTGTCT
CCTCCAAACACGATCTTTAGATCACGAGGATATGGATGGGGCAATTCACT
TGCGAGGAATAACCCGGCTGCTACCCGAACTCATAGCACATCGACAATCG
ACACCATTGTGTCCGAGAGCGTGTAGTGCGGGGGGCATTAAAGATAGTTC
AGGTGCGATCAGACCTTAAACAAAGAGATTTCCTGACAAAGCCCCTGTCT
AAAGAAACTTTTTGCGTCCGCCGAAAATGCGTCATGACTTTGCGTTGAAA
AGGTTTGGCGCTGCGTTGTTTGCCCCCATTTCTAGCTGCAGGGTGGCTAT
CGATGTTGGGTTTTCTCTTGGGCATGCGTCATATTTTGTTGTGTTTGGAC
GGGGGGCGTTACCAGGGAAGATATATCGTACTGCTGGCCGTATTAACCGA
CCGCGTTAGGTACTCTGTTTTTCGTGTTCTTTCTGCTCTTTTCTGGCATC
TCATTTCCGCCGTTGTTTTGGTTTTGCTTTGATGGGCTGGAAGTATCAGG
TGTGCTCAATTCGTGAACGTTGCGCGGAATCATCTGCTGGTTACACTGCC
ATCGACACTCATGGGGGGGGGATGTCTTACCACAGATTCCCGCCGCAGTG
AAGCAGTGTTTGTGGCGTGGCATACATTTGTTATCGGTGTTTGATGTTTG
GACTTTGGTTTCTTGTTGCACCGGAAGAACATTGCTTGAGGGTTATGATG
TGATCATTTTGTTCAGGGAGGATGCCCCGGCAGGAGGGGCTGTTGTTAAG
GAGTGTGGCTGTTGGCATGAATAGGGTATATCTTATTGATAGGAAGCTGG
ATGGTCAGGAGGTATACTTCCATGGTGCAGTACCCATACCACATCAGAAT
TGTCCGCTATGCGTGTCCCCTGAGATGAAAGTTGGGTCCTTACTTCATCT
CAGACCTTCTCTCGGTGAAACGAACACCTTTGCCATCCTACACGTTCGTG
AAGCGAGAGCATCGAACGACATTTTCCTTTTCCTTTCCCTAGGACAACGC
TTCCACCTACGGCTTGTGCTCCTTCATATTTGGCGCTAACAGCAGGATAC
TGGTTTGAGTCTCCTCGGGTGCATATTTTTCTCCTGACTTGGATATTTCT
CCCGAGGACACCAATGTGTGCCAGTCCTTAGAGTACCTCTTGGAGTCGAT
CTTACAAATACTATGTGATACTTCCATCGAAGTTCCCGTCCTCGTCACAA
AAGGTTCCCAGTTGAGGGTAAACTACATGGGTGGAGAGTGTTAAGAGCGG
ACCCGATTCGCAGGATATCCGTCGATTGACTTTTACCAGAATCGTCAGCG
GCATTAATGCTAAGCGAGTACTAGACGTACGACCCTCCCTGCCGTTGTCG
CCTGGATCCCATCTCTGCAGTCACGTGTCACCTGTTATTAGGTCTCACCA
CTTCACGAGAAACTATGTTTGACACATCGCTCTCCTTCTTTGCGATTCTG
GTAGAGATGGGGACTTGCGATGCATTTGCCAAGCGTTTACGAGACTGGGA
CCTCGCGAAGGATACACGATAGGAGGTTGTCGAGATGCCGCAGGGGACTT
CTCTTACAGCCGCCGTTCTTCTCGAGCTGTTTTCTCAGTTTCATCGGTGC
ATGAAGTGATTGCAATGGCGGACAAGTGTTGCACACAGCGGCCTAAGGTG
CTGGCCATGTGTAGTCGTGCTGGAGATTACACTCTCAGATTTGACTCCGC
TCACTCAGAGTTGGCGAGCGCTGTCGGACGGAAATATGGCGTGCTGCACG
ACACCTGTCTTCCTAATTTTTCCAGTTATCTGGCACTCTTTTTTGGAGAA
TCGTTCACCGTCAAAGAGCATGAGTTGGCCAATCTTCTTCCGCGTAAACC
CCCAGCAGTTTGTGCTCGCACTTCGGCCAAGGTTGCAGTAGAGCGGCGTG
CTGCGCTGCGCACCTTTGGTCGGACAACCTCGTGTCTCCGTCGAACACGG
GTACTTTTTTGTGCTAGCCTATACGGCTGTTTGCTTGTGGCACGGTATCA
TTTTCGATGCGTTTGCTGCTTGGTTGGAACTGCTTCACCTTGCGCATCAA
GTTTTTGTCATCGGCTGTATGCTGTCACGCGGATTTCGGCCAGTTTCATT
GGGGCCTGTGCATGTTTCTGCTCTTCCTGGCATTACTGCTGCTTCTCCCG
AAATAGCGGTCGCCCTAACCCCGACCCTGTCCCCATAAAAAAAGAGGAGC
GCATGTCGGGCCAGGAAGAAGAATTGGTGGACTTCGAGCACGAGAAGGAC
CAGCAACAAGACCAGAGGCCCCAGCGGTCCTCGGGCGGCTCGGGTAGCTC
GTTGGAGGATGAGGAGGACGAGTTGAGGATCTGGCGCAGCCCCCGTTCCC
GTTTGGCTCCGATGAAGGCCTTGCTTCAGGATGCGTCTTCGGAGGACCTG
TCTGCTGCCTTTCGTAACGGCGACATCACTCTTCGAGATATTGTGTCCAC
GTGTTTGTCGTCCGATGTCCCTCGTCCCGTTCCCCCCTTCGAGCTAGATA
TGTCGCAGGAGGAAATTTCACGCTTCCCCCGCGATGACTACGACGCATTG
CTCCAACTCAGCGAACACTGGCACGGGCGTGTGACGGAGGATCTTCGCGC
GGAGGCGGAGTCGGTGGCAGAGAAAGCGGCTGCAGAGGAAGCAGCGGCGG
CAGCTGCGGCGAGAGCGGAGGCGGAACAAGTGGCTGCGGAGCAAGCGGCG
GCGAAGCAAGCGGCGGCGGAGGAAGCGGATGCAGCAGCAACGGCGGCAGC
GGTGGAGGAGAAAGCGGCTGCGGAACAAGCGCAGTTTGAAGAACGTGTTC
GACAGGTGCAAGCTATCATGGCTAGAACCAACAGGCTACGAGCGGGCGTT
CTTCCGGAGGAGCCTGGCACACCAACTCTGTTTCCCTCTCCCGTTTCGCC
CTCTCCGAGTGCTGTCTCGCCGCGCCCGCCCCTTTCGTCTCCCCACCCTC
GTCCCGTTGGACATCCTCGTATGCCGCGCGCTCAAGCATCTATTGATTCT
AGCAGGGGCACAGGTGCGATGGAGTCAGGGCGGCCCGTGGACACCCCGCG
ATTTTTCGTCACTCTCGGTGGAACCTCCAGACCTGACCCCGACGGTGTGC
ACGAGAAGGACGTACTTGCGCCATACGACAGGCAGTCGGCGGATATCGCA
TTTCTTCATCGCAGCGTCGGGATGCCCTCTCGCGATGTCACGTTCCACGA
ACAAGACCAACCAGACGCGGACACTGCTTGGGGGGCCTGTCGCCAATTCG
TCCTGGATGCCGTTCGCCCAACACCCATCTCGCACGTTACGTTCAGCACC
CTCTTCAACAAAGGGTTCATCAAGAAACTCACGCCCTTCCAGCAGCGGAA
CGTTTTCAGGCTTGCACATGCTCTACGACGGGCTACATTCCGCGATGGAC
ATCAAGGATCTACCCTGGTCCCCCCGGGTGGTGTTTCACAGCCGCCTCTC
AACCGCGCGGCCGTGACCACCGACCAGCGTGAGATCACCAGCTCGAACTA
CGGCAAGGCGCCCCAGCGGGATTCTTTTCACTTCACCCGTGGCTCGGGCG
AGGGGCGCAACCACTCGGAGTTTGCGGCACCGGCGTCTTCTACGTCGGAT
GAGGATAACACGAGTCACAGATCGGCCTCCGGTCGTGGTTCCGGAGATGG
TGTCACGGGCGGTACGCAGGGTTCTCCGAGAAATCCCCGCGGCGAGCGTT
GGGGGGATCTACCTCCGACGGACAATATCCAGTCTACGGCAGCGCGTTCG
AAGAAGCCCCGCAGCGAGCGTTGGGGGGATCTACCTCCGACGGACAATTC
CCGGTCTACGGCAGCGCCTTCGAGGAAGCCCGGCGGCGAGCGTTGGGGGG
ATCTGCCTCCGACGGACAAAACCCGGTCTACGGCAGTGCCTTCGAGGAAG
CCCGGCAGCAAGCGCTGGGGGGATCTGCCTCCGACGGACAACACCCGATC
TACGGCTGCGCCTTCGAGCAAACCCGACGGCGAGCGTTGGGGGGATCTAC
CTCCGACGGACAATACCCGGTCTACGGCTGCGCCTTCGACGAAACCCGGC
AGCGAGCGTTGGGGGTATCAACCTGCGACGGATATTACCCGGTCTAAGGC
TGCGCCTTCGAGCAAACCCGACGGCGAGCGTTGGGGGGATCAACCTTCGA
CGGACAATACTCGGTCTACGGCTGCGCCTTCGACGGAACCCGGCAGCGAG
CGTTGGGGGGATCAACCTCCGACGGACAACACCCGGTCTACGGCTGCGCC
TTCGACGAAGTCCGGCGGCGAGCGTTGGGGGGATCAACCTCCGACGGACA
ACACCCGGTCTACGGCTGCGCCTTCGACGAAGTCCGGCGGCGAGCGTTGG
GGGGATCAACCTGCGACGGATAACACCCGGTCTAAGGCTGCGCCTTCGAG
AAAGCCCGGCAGCGAGCGTAGGAGGGATAAACCTCCTACGGAAAGTACCC
GGCCTACGGTAGTGCCTTCGAGGAAGCCCGGCAGTGAGCGTTGGAGGGAT
CAACCTCCGACGGATAGTACCCGGTCTACGGCTGCGTGTCATCTCGGCGG
GAAGAACATTGAGAACGAGGATCGTCGCCGGTCCAACAGGTCTCCACCCG
TACGTCTCTGCGGCAGGAGCAGAAGCCGGAGCGCCGGTAGGAGCCGGACC
CACAGGTCTCCGCCAGCGCGTCGTCGCAGCTCGAGCAGGAACCGGAGCGA
GGATCGGAGCAGGGCTAACAGGTCTACGGTTGGACGTCGCCGCAACTGGA
GCAGGAGCCGGAGCAAGGATCGGAGCAGGGCTAACAGGTCTACGTCTAGA
CGCCGCCGCAGCCGGAGCAGGACCCGGACCGAGGACCGCAGCATGGCCAC
TAGCCGTGGCAATGGAAGGTGGTGTCGATCGGAAGCGGAAGCACAGCAAC
GGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1497:4236..14490-

>mRNA_Ecto-sp13_S_contig1497.3763.1 ID=mRNA_Ecto-sp13_S_contig1497.3763.1|Name=mRNA_Ecto-sp13_S_contig1497.3763.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3363bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1497:4236..14490- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGAGAGCACGGGGAAGAACAGTGGCAAGCGTAAGGACAAGACCAG
GAGCAAGAAACCAGGCAAGAATGCGCACAATGTTCGCATGGACGGCGAAC
CCAGCAGGAGCAGCAAACACCCCCAGTACCACAAGAAGAGGCCGCATCCG
CCGGGGGAGAGTGGCAAGAAAAAAAGAGTCGCCACGCCGGAGGAGAGTAG
CAAGAAAAGGGTCGCCACGACCCCGTCCCCTCCTTCTTCTTCGTCGTTGT
CCCGCCGTGTGGATGATATACGGCTGGTGCTCGACTCCACCCCCTCTGAT
GAGGAACTGGCGAAGAAGGTGCGCGGTGTCGTTTTAGAGCTAGAGGCCGT
GGACCGAGCCCTGGCCGACGAAGGCACGTACCTGGGTATCGTGGACAAGG
CCGAGCTCGAGAAACGGAGGTACATTCTGGTGAAGAGGCGCTTCGTCCTC
AGGGAGGAAAGGGAGTTGGGGCAGAAACTTCGCGTCGAGGTTAAGAAAGC
AGAGGAAGAGCGCGCCGCGGCCGAGCGAAGTGAACGGCAACCATCCTTGT
CCCCAGGGTCCAAAAGCAGCAGCGGCAACAAGAACGGCGGCAACAACAGT
AGCGTCACCACAGCACAACAATCTTCCCCGCCAACCCGAGCACCAGCAGC
GCCAGCAGCACAAGCACCGGCACTAGCACCAGCACCGGCACCAGCACCGG
CACCGGCACCAGCACCGGCACCGGCACCAGCACCAGCACCAGCACCGGCG
CCAGCGCCGGCACGAGCACCGGCACCAGCGCCGGCACCGGCACCGGCACC
AGCACCAGCACCAGCAGTATCGCCAACGTCGAAACCTCGTACCAGCATGT
ATCAGCCATCGTCCTCGAAGACCGGCGGTGGGGACATCGGGGAGTTCATA
AAAAAGAACTCGGCCGCGATGGGGAAGGAGCTGGCCGGAGTGAGGCCTTC
CTCGTCGGCGGGCACGACCGCTGCTGGAAGAACTAGCACCTCGGCTGGCA
GTGGCGTCACGGAGGAGCGCATGTCGGGCCAGGAAGAAGAATTGGTGGAC
TTCGAGCACGAGAAGGACCAGCAACAAGACCAGAGGCCCCAGCGGTCCTC
GGGCGGCTCGGGTAGCTCGTTGGAGGATGAGGAGGACGAGTTGAGGATCT
GGCGCAGCCCCCGTTCCCGTTTGGCTCCGATGAAGGCCTTGCTTCAGGAT
GCGTCTTCGGAGGACCTGTCTGCTGCCTTTCGTAACGGCGACATCACTCT
TCGAGATATTGTGTCCACGTGTTTGTCGTCCGATGTCCCTCGTCCCGTTC
CCCCCTTCGAGCTAGATATGTCGCAGGAGGAAATTTCACGCTTCCCCCGC
GATGACTACGACGCATTGCTCCAACTCAGCGAACACTGGCACGGGCGTGT
GACGGAGGATCTTCGCGCGGAGGCGGAGTCGGTGGCAGAGAAAGCGGCTG
CAGAGGAAGCAGCGGCGGCAGCTGCGGCGAGAGCGGAGGCGGAACAAGTG
GCTGCGGAGCAAGCGGCGGCGAAGCAAGCGGCGGCGGAGGAAGCGGATGC
AGCAGCAACGGCGGCAGCGGTGGAGGAGAAAGCGGCTGCGGAACAAGCGC
AGTTTGAAGAACGTGTTCGACAGGTGCAAGCTATCATGGCTAGAACCAAC
AGGCTACGAGCGGGCGTTCTTCCGGAGGAGCCTGGCACACCAACTCTGTT
TCCCTCTCCCGTTTCGCCCTCTCCGAGTGCTGTCTCGCCGCGCCCGCCCC
TTTCGTCTCCCCACCCTCGTCCCGTTGGACATCCTCGTATGCCGCGCGCT
CAAGCATCTATTGATTCTAGCAGGGGCACAGGTGCGATGGAGTCAGGGCG
GCCCGTGGACACCCCGCGATTTTTCGTCACTCTCGGTGGAACCTCCAGAC
CTGACCCCGACGGTGTGCACGAGAAGGACGTACTTGCGCCATACGACAGG
CAGTCGGCGGATATCGCATTTCTTCATCGCAGCGTCGGGATGCCCTCTCG
CGATGTCACGTTCCACGAACAAGACCAACCAGACGCGGACACTGCTTGGG
GGGCCTGTCGCCAATTCGTCCTGGATGCCGTTCGCCCAACACCCATCTCG
CACGTTACGTTCAGCACCCTCTTCAACAAAGGGTTCATCAAGAAACTCAC
GCCCTTCCAGCAGCGGAACGTTTTCAGGCTTGCACATGCTCTACGACGGG
CTACATTCCGCGATGGACATCAAGGATCTACCCTGGTCCCCCCGGGTGGT
GTTTCACAGCCGCCTCTCAACCGCGCGGCCGTGACCACCGACCAGCGTGA
GATCACCAGCTCGAACTACGGCAAGGCGCCCCAGCGGGATTCTTTTCACT
TCACCCGTGGCTCGGGCGAGGGGCGCAACCACTCGGAGTTTGCGGCACCG
GCGTCTTCTACGTCGGATGAGGATAACACGAGTCACAGATCGGCCTCCGG
TCGTGGTTCCGGAGATGGTGTCACGGGCGGTACGCAGGGTTCTCCGAGAA
ATCCCCGCGGCGAGCGTTGGGGGGATCTACCTCCGACGGACAATATCCAG
TCTACGGCAGCGCGTTCGAAGAAGCCCCGCAGCGAGCGTTGGGGGGATCT
ACCTCCGACGGACAATTCCCGGTCTACGGCAGCGCCTTCGAGGAAGCCCG
GCGGCGAGCGTTGGGGGGATCTGCCTCCGACGGACAAAACCCGGTCTACG
GCAGTGCCTTCGAGGAAGCCCGGCAGCAAGCGCTGGGGGGATCTGCCTCC
GACGGACAACACCCGATCTACGGCTGCGCCTTCGAGCAAACCCGACGGCG
AGCGTTGGGGGGATCTACCTCCGACGGACAATACCCGGTCTACGGCTGCG
CCTTCGACGAAACCCGGCAGCGAGCGTTGGGGGGATAAACCTCCTACGGA
AAGTACCCGGCCTACGGTAGTGCCTTCGAGGAAGCCCGGCAGTGAGCGTT
GGAGGGATCAACCTCCGACGGATAGTACCCGGTCTACGGCTGCGTGTCAT
CTCGGCGGGAAGAACATTGAGAACGAGGATCGTCGCCGGTCCAACAGGTC
TCCACCCGTACGTCTCTGCGGCAGGAGCAGAAGCCGGAGCGCCGGTAGGA
GCCGGACCCACAGGTCTCCGCCAGCGCGTCGTCGCAGCTCGAGCAGGAAC
CGGAGCGAGGATCGGAGCAGGGCTAACAGGTCTACGGTTGGACGTCGCCG
CAACTGGAGCAGGAGCCGGAGCAAGGATCGGAGCAGGGCTAACAGGTCTA
CGTCTAGACGCCGCCGCAGCCGGAGCAGGACCCGGACCGAGGACCGCAGC
ATGGCCACTAGCCGTGGCAATGGAAGGTGGTGTCGATCGGAAGCGGAAGC
ACAGCAACGGTGA
back to top