mRNA_Ecto-sp13_S_contig14959.3759.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI) HSP 1 Score: 228 bits (581), Expect = 6.320e-74 Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRIPLGGXXXXXXXXXXGKVSIKGGAAATDGDTGS 420
DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKS++EEK DG+DG RKYHFVERS GKTSRSVRLPEAADTA ANADLTDGVL ITFPKKEAP S+RFRIPLGG XXXXXXX GKVSIKGGAAATDGDTGS
Sbjct: 68 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSEKEEKGDGKDGDRKYHFVERSYGKTSRSVRLPEAADTATANADLTDGVLTITFPKKEAPVSSRFRIPLGGGGXXXXXXXDGKVSIKGGAAATDGDTGS 207
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE) HSP 1 Score: 224 bits (571), Expect = 7.830e-73 Identity = 129/140 (92.14%), Postives = 134/140 (95.71%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRIPLGGXXXXXXXXXXGKVSIKGGAAATDGDTGS 420
DFHETKDGFELIADLPGMK+EDVSIDVDQESGVLTVSGERKSKREEK D +DG RKYHFVERS GKTSRSVRLPEAA+TANANADLTDGVL ITFPKKEAPAS+RFRIPLGGXXXXXXXXXX KVSIKGGAAAT+GDTGS
Sbjct: 38 DFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLGGXXXXXXXXXXXKVSIKGGAAATEGDTGS 177
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE) HSP 1 Score: 217 bits (553), Expect = 2.820e-69 Identity = 128/143 (89.51%), Postives = 134/143 (93.71%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRIPLGGXXXXXXXXXXG---KVSIKGGAAATDGDTGS 420
DFHETKDGFELIADLPGMK+EDVSIDVDQESGVLTVSGERKS+REEK D +DG RKYHFVERS GKTSRSVRLPEAA+TANANADLTDGVL ITFPKKEAPAS+RFRIPLGGXXXXXXXXXX KVSIKGGAAAT+GDTGS
Sbjct: 93 DFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSEREEKRDDKDGDRKYHFVERSYGKTSRSVRLPEAANTANANADLTDGVLTITFPKKEAPASSRFRIPLGGXXXXXXXXXXXXXXKVSIKGGAAATEGDTGS 235
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: B3VMZ8_FUCSE (Heat shock protein 20 n=2 Tax=Fucus serratus TaxID=87148 RepID=B3VMZ8_FUCSE) HSP 1 Score: 148 bits (374), Expect = 9.250e-43 Identity = 70/111 (63.06%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRIPLG 333
DFHET G+EL ADLPGMKKED+ +D+D ESGVLTV+GERK +REEK +G++ RKYHF+ERS GKT+RSVRLP+ A T+ A+A+ +GVL I FPK+E P++ R +IP+G
Sbjct: 67 DFHETNKGYELSADLPGMKKEDIKVDIDSESGVLTVTGERKQEREEKSEGDNEQRKYHFLERSYGKTTRSVRLPDTAATSKASAEYVNGVLKINFPKREPPSARRLQIPIG 177
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A0D2UFN1_CAPO3 (Small HspC2 heat shock protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFN1_CAPO3) HSP 1 Score: 96.7 bits (239), Expect = 1.620e-22 Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRI 324
D HE+ DG+ + ADLPGMKK+++S++ E+G+LT+SGE+K ++E K D YH ERS G+ SR++RLP AD++ ANA TDGVL + K+ PA +R I
Sbjct: 77 DVHESSDGYHISADLPGMKKDEISVNC--ENGILTISGEKKQEQE-KSD-----HTYHVFERSVGRVSRTLRLPRDADSSKANAKYTDGVLTLDIAKRALPAGSRIAI 176
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A6H5JPQ3_9PHAE (HSP20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ3_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 8.570e-22 Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRL 219
DFHETKDGFELIADLPGMK+EDVSIDVDQESGVLTVSGERKSKRE K DG++G R ER+ G + L
Sbjct: 38 DFHETKDGFELIADLPGMKQEDVSIDVDQESGVLTVSGERKSKRE-KLDGKNGDRS---TERNFGAVMGCLEL 106
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A660RGY2_9THEM (Hsp20/alpha crystallin family protein n=2 Tax=Thermotogales TaxID=2419 RepID=A0A660RGY2_9THEM) HSP 1 Score: 87.0 bits (214), Expect = 5.110e-19 Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKE 297
D +ETKD + +LPGM K+DV + + E+ VLT+SGE+KS+REEK R Y VERS GK RS +P+ DT N A G+L IT PKKE
Sbjct: 50 DIYETKDAINIDVELPGMDKKDVKVKI--ENNVLTISGEKKSEREEK------GRNYRVVERSFGKFERSFIIPDTVDTKNVKAKFEKGILKITLPKKE 140
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: UPI000C1D11E1 (17.8 kDa class I heat shock protein-like n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D11E1) HSP 1 Score: 85.9 bits (211), Expect = 1.630e-18 Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKE 297
D+ ET +G ADLPG+KKE+V ++V +E GVL +SGER ++EEK D K+H VERS GK R RLPE A T A + +GVL +T PK+E
Sbjct: 55 DWKETPEGHVFKADLPGLKKEEVKVEV-EEGGVLQISGERSKEQEEKND------KWHRVERSSGKFLRRFRLPENAKTDQVKASMENGVLTVTVPKEE 146
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A1R3HFU4_9ROSI (SHSP domain-containing protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HFU4_9ROSI) HSP 1 Score: 84.7 bits (208), Expect = 2.710e-18 Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNR 315
D+ ET + I+DLPG+KKE+V ++VD E VL ++GERK ++++K D K+H VER GK RS RLPE A T A + DGVL +T PK+E R
Sbjct: 31 DWKETPEAHVFISDLPGLKKEEVKVEVDDER-VLKITGERKVEKDDKND------KWHRVERCRGKFQRSFRLPETAKTDEIKASMEDGVLVVTVPKQEVKKPER 128
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Match: A0A2H6B979_9BACT (Spore protein SP21 n=1 Tax=bacterium HR41 TaxID=2035436 RepID=A0A2H6B979_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 3.950e-18 Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 1 DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGEDGARKYHFVERSCGKTSRSVRLPEAADTANANADLTDGVLAITFPKKEAPASNRFRIPLGG 336
D +ET D + L ADLPG+ + DVSI+V E+GVLT+SGER+S+REEK DG + ER+ G+ SRS+ LPE D A+ GVL + PK E +R +I G
Sbjct: 35 DLYETDDAYVLKADLPGLSENDVSIEV--ENGVLTISGERRSEREEKRDG------WIRAERTFGRFSRSLTLPEGVDPNRITAEFDKGVLTVRVPKPEQHRPHRVQIRAAG 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14959.3759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14959.3759.1 >prot_Ecto-sp13_S_contig14959.3759.1 ID=prot_Ecto-sp13_S_contig14959.3759.1|Name=mRNA_Ecto-sp13_S_contig14959.3759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp DFHETKDGFELIADLPGMKKEDVSIDVDQESGVLTVSGERKSKREEKCDGback to top mRNA from alignment at Ecto-sp13_S_contig14959:3356..4290- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14959.3759.1 ID=mRNA_Ecto-sp13_S_contig14959.3759.1|Name=mRNA_Ecto-sp13_S_contig14959.3759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=935bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14959:3356..4290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14959:3356..4290- >mRNA_Ecto-sp13_S_contig14959.3759.1 ID=mRNA_Ecto-sp13_S_contig14959.3759.1|Name=mRNA_Ecto-sp13_S_contig14959.3759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14959:3356..4290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |