mRNA_Ecto-sp13_S_contig14951.3758.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: D7G819_ECTSI (UDP-sulfoquinovose: diacylglycerol alpha-sulfoquinovosyltransferase SQD2, C-terminal, family GT4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G819_ECTSI) HSP 1 Score: 332 bits (851), Expect = 2.380e-113 Identity = 178/184 (96.74%), Postives = 179/184 (97.28%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRAFKALFVARSEDAVVATAANEA 552
VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVK LLED+ALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRA KAL RSEDAVVATAANEA
Sbjct: 85 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKALLEDKALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRALKALLATRSEDAVVATAANEA 268
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A6H5JM44_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM44_9PHAE) HSP 1 Score: 328 bits (842), Expect = 8.580e-109 Identity = 181/197 (91.88%), Postives = 182/197 (92.39%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGK-------------TGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRAFKALFVARSEDAVVATAANEA 552
VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGK TGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETE+WSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRA KALF ARSEDAVVATAANEA
Sbjct: 300 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKVVCSWMSLRGVFLTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETEKWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAVLFPFRALKALFAARSEDAVVATAANEA 496
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A7S4K019_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K019_9STRA) HSP 1 Score: 187 bits (476), Expect = 8.040e-57 Identity = 98/148 (66.22%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRR 444
V TG +SG+ LS AFASAD F+MPSDSETLGFVVLESMASGVPV+GANAGGIPD+I+DG TG+LV GD +A D VK L +D+ R M K R E ERW WEAATS LRNVQY+KA++NF SRA GG G+PR+ LR+ GYR +R
Sbjct: 72 VFTGQLSGDDLSSAFASADAFMMPSDSETLGFVVLESMASGVPVIGANAGGIPDIIDDGDTGFLVTPGDTKAFVDCVKQL-QDKDFREAMGKRARAEAERWGWEAATSQLRNVQYEKALINFHSRAFGGFGRPRTAGALRLLGYRTKR 218
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A835ZJ95_9STRA (Glycosyl transferase, group 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ95_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.580e-56 Identity = 104/155 (67.10%), Postives = 124/155 (80.00%), Query Frame = 1
Query: 7 TGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAKGAV 471
TG M+G ALSQAFASADVF+MPSD+ETLGFVVLE+MASGVPVV A AGGIPDLIEDG+TG+L GD A ++R + LLED ALR +++ AGR ETE+ SWEAATS LRNVQY++AI+NFK+RA GLG PR+RTK R + RR V A + AV
Sbjct: 290 TGAMTGTALSQAFASADVFLMPSDTETLGFVVLEAMASGVPVVAARAGGIPDLIEDGRTGFLCTPGDAAAWAERTRALLEDAALRQRVAAAGRAETEQHSWEAATSYLRNVQYKRAIMNFKTRAFAGLGLPRTRTKWRFVLMQCRRVVLAVQRAV 444
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: B7GDV1_PHATC (Glycosyl transferase, group 1 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDV1_PHATC) HSP 1 Score: 194 bits (492), Expect = 3.020e-56 Identity = 100/150 (66.67%), Postives = 120/150 (80.00%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSV 450
V TG + G+ LS AFASADVFVMPSDSETLGFVVLESMASGVPVVGA AGGIPD+I+DGKTG+LVP GD+ R+++L + R +M+KA R+ETERW WEAATS LRNVQY+KA++NF SRA GG G+PRS T R+ G+R RR +
Sbjct: 326 VFTGQLDGDELSSAFASADVFVMPSDSETLGFVVLESMASGVPVVGAAAGGIPDIIDDGKTGFLVPPGDIAGFVSRLESL-RNAKFRTQMAKAARKETERWGWEAATSYLRNVQYEKALINFHSRAFGGFGRPRSGTMWRLLGWRMRRVI 474
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A7S4JZT8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZT8_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.460e-54 Identity = 98/148 (66.22%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRR 444
V TG +SG+ LS AFASAD F+MPSDSETLGFVVLESMASGVPV+GANAGGIPD+I+DG TG+LV GD +A D VK L +D+ R M K R E ERW WEAATS LRNVQY+KA++NF SRA GG G+PR+ LR+ GYR +R
Sbjct: 329 VFTGQLSGDDLSSAFASADAFMMPSDSETLGFVVLESMASGVPVIGANAGGIPDIIDDGDTGFLVTPGDTKAFVDCVKQL-QDKDFREAMGKRARAEAERWGWEAATSQLRNVQYEKALINFHSRAFGGFGRPRTAGALRLLGYRTKR 475
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A7S2A9M7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9M7_TRICV) HSP 1 Score: 177 bits (448), Expect = 2.060e-53 Identity = 89/148 (60.14%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRR 444
V TG M G+ LS AFASAD F+MPSDSETLGFVVLE+MASG+PVVGANAGGIP +I+DG T +L GD++ +++ L D RG+M K R E ERW WEAATSVLRNVQY++A++NF SRA GG G+P ++ R+ GYR +R
Sbjct: 9 VFTGQMGGDDLSSAFASADAFIMPSDSETLGFVVLEAMASGIPVVGANAGGIPSIIDDGNTSFLAETGDIDDFVGKLEQL-RDPKFRGEMGKRARAEAERWGWEAATSVLRNVQYERALINFHSRAFGGFGRPGTKGVWRLMGYRMKR 155
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A6V2AA61_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AA61_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.920e-53 Identity = 99/166 (59.64%), Postives = 118/166 (71.08%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRT--------------KLRMAGYRFRRSVSA 456
V TG + G+ LS+AFASAD FVMPSDSETLGFVVLESMASGVPVVG +AGGIPD+I+DG+T +LVP GD +A DR+ T L D R KM KA R E ERW WEAATS LRNVQY++A++NF SRA GG G+P S++ KLR+ G+R R A
Sbjct: 164 VFTGQLGGDDLSRAFASADAFVMPSDSETLGFVVLESMASGVPVVGVDAGGIPDIIDDGETSFLVPIGDTDAFVDRL-TKLRDPVFRKKMGKAARAEAERWGWEAATSYLRNVQYERAMINFHSRAFGGFGRPGSKSLWRLLRVRVGRLLQKLRVPGFRRNRGADA 328
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A7S1BEZ9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEZ9_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.250e-52 Identity = 95/154 (61.69%), Postives = 114/154 (74.03%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRTKLRMAGYRFRRSVSAAK 462
V TG + G+ LS+AFASADVFVMPSDSETLGFVVLESMASGVPVVGA AGGI +LI+DG+ G+L G+ + DR+ L E+ LR M KA R E ERWSWEAATSVLRN+QY++A+VNF RA GG GKPRS R+ +R R ++ K
Sbjct: 43 VFTGQIRGDDLSKAFASADVFVMPSDSETLGFVVLESMASGVPVVGARAGGIQNLIKDGEDGFLCEVGNTDMYVDRLMQLKENLELRKAMGKASRREAERWSWEAATSVLRNIQYERALVNFHMRAFGGFGKPRSGGAWRLFKFRLVRLLAFLK 196
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Match: A0A6V2AAT1_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AAT1_9STRA) HSP 1 Score: 181 bits (460), Expect = 9.080e-52 Identity = 99/166 (59.64%), Postives = 118/166 (71.08%), Query Frame = 1
Query: 1 VLTGVMSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLIEDGKTGYLVPAGDVEAMSDRVKTLLEDRALRGKMSKAGREETERWSWEAATSVLRNVQYQKAIVNFKSRALGGLGKPRSRT--------------KLRMAGYRFRRSVSA 456
V TG + G+ LS+AFASAD FVMPSDSETLGFVVLESMASGVPVVG +AGGIPD+I+DG+T +LVP GD +A DR+ T L D R KM KA R E ERW WEAATS LRNVQY++A++NF SRA GG G+P S++ KLR+ G+R R A
Sbjct: 312 VFTGQLGGDDLSRAFASADAFVMPSDSETLGFVVLESMASGVPVVGVDAGGIPDIIDDGETSFLVPIGDTDAFVDRL-TKLRDPVFRKKMGKAARAEAERWGWEAATSYLRNVQYERAMINFHSRAFGGFGRPGSKSLWRLLRVRVGRLLQKLRVPGFRRNRGADA 476 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14951.3758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14951.3758.1 >prot_Ecto-sp13_S_contig14951.3758.1 ID=prot_Ecto-sp13_S_contig14951.3758.1|Name=mRNA_Ecto-sp13_S_contig14951.3758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp MSGEALSQAFASADVFVMPSDSETLGFVVLESMASGVPVVGANAGGIPDLback to top mRNA from alignment at Ecto-sp13_S_contig14951:2356..4290- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14951.3758.1 ID=mRNA_Ecto-sp13_S_contig14951.3758.1|Name=mRNA_Ecto-sp13_S_contig14951.3758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1935bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14951:2356..4290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14951:2356..4290- >mRNA_Ecto-sp13_S_contig14951.3758.1 ID=mRNA_Ecto-sp13_S_contig14951.3758.1|Name=mRNA_Ecto-sp13_S_contig14951.3758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14951:2356..4290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |