mRNA_Ecto-sp13_S_contig14931.3752.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI) HSP 1 Score: 1068 bits (2762), Expect = 0.000e+0 Identity = 580/675 (85.93%), Postives = 588/675 (87.11%), Query Frame = 1
Query: 1 QQELYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPAPPAVQRPILPTPSPSSXXXXXXXATGGTIAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERSQELAGESERALAAXXXXXLVEPPAAGEVVGGEDGKDLYEAARGTSRRRLSDGTWVAGGASQSQSAAETPVASTPVVAVPSAPPAPFGTTPAVHRPXXXPFQLRCPSAPAGGRIDGEHGLAAAAAXXXESEGRRDGGDPLQLEGFAPARGIEESGRYGCPAEGVGGDEAPATVVSPFSSPGLPSIVEPHPREDGAPDVVNVKRPRENEEAEQESVAGTERHTSPKRQRI-GDTTSHAGGVLGACRRG 2022
+QELYPESQVR NLTWR PCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGS TCSESPFSFNGSTDF EDDILGAMQKLVGQIHQTKSGSAEQQAIRPR FSDNLRKIGEKFRRGRQEDAHEFLRHLVDKM GSYLERRGVDPFA +RLAETTPIH VFGGYLRSQLKCS CGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLV+AEKNLSVFKPPNALVFQLKRFGFTNGPRK DHISFGDKLNLEVSGPER ANYDLTGVVVHSGKTMSSGHYYAYVRSSAG WARMNDSVVTKVTLDTVL+DKAYVLFYTR P PAPPAVQRPILPTPSPS A GGT AAGA XXXXXXXXXXXXX RSQE A E ERALAA LVEPPAAG VVGGEDGKD YEAARGTSRRRLSDGT V GG SQSQ A ETPVASTPVVAVPSAPPAP GTTPAVHRP PF LRCPSAPAGG IDGEHGLAA A XX DGGDPLQLEGFAPARGIEESGR GCPAEGVGGD A ATVVSP SSPGLPSI EPHPREDGAPDVVNVKR RE+EEAE+ESVAGTER+TSPKRQR+ GDTTS AG VLGACRRG
Sbjct: 111 EQELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSFNGSTDFCEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRTFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAPPAVQRPILPTPSPSLASSSSSPAVGGTAAAGADGASSVGKGPPTHPAAXXXXXXXXXXXXX------RSQEQAREIERALAAAAGAALVEPPAAGAVVGGEDGKDPYEAARGTSRRRLSDGTCVGGGVSQSQGATETPVASTPVVAVPSAPPAPSGTTPAVHRPPP-PFHLRCPSAPAGGGIDGEHGLAAVAEEXXXXXXXXDGGDPLQLEGFAPARGIEESGRNGCPAEGVGGDAATATVVSPSSSPGLPSIDEPHPREDGAPDVVNVKRSREDEEAEEESVAGTERYTSPKRQRLDGDTTSQAGDVLGACRRG 778
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE) HSP 1 Score: 1055 bits (2727), Expect = 0.000e+0 Identity = 590/764 (77.23%), Postives = 603/764 (78.93%), Query Frame = 1
Query: 1 QQELYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQ----------------------------IHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQ---------------------------------EDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTK-------------------VTLDTVLKDKAYVLFYTRCPAPAPPAVQRPILPTPSPSSXXXXXXXATGGTIAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------RERSQELAGESERALAAXXXXXLVEPPAAGEVVGGEDGKDLYEAARGTSRRRLSDGTWVAGGASQSQSAAETPVASTPVVAVPSAPPAPFGTTPAVHRPXXXPFQLRCPSAPAGGRIDGEHGLAAAAAXXXESEGRRDGGDPLQLEGFAPARGIEESGRYGCPAEGVGGDEAPATVVSPFSSPGLPSIVEPHPREDGAPDVVNVKRPRENEEAEQESVAGTERHTSPKRQRIGDTTSHAGGVLGACRRGNFNP 2034
QQELYPESQVR NLTWR PCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNG YSQGSQ TCSESP NGSTDFGEDDILGAMQKLVGQ IHQTKSGSA+QQAIRPR FSDNLRKIGEKFRRGRQ EDAHE LRHLVDKM GSYLERRGVDPFA +RL ETTPIH VFGGYLRSQL+CS CGFCSDTFDPFMDLAMNVEKVDS GVAM ERSLQAALRRFTAPETLGAGNEWKCGGCNKLV+AEKNLSVFKPPNALVFQLKRFGFTNGPRK NDHISFGDKLNLEVSGPER NYDLTGVV+HSGKTMSSGHYYAYVRSSAGCWARMNDSVVTK VTLDTVL+DKAYVLFYTRCP PAPPAVQRPILPTPSPS ATGGT+AAGA XXXXXXXXXXXXXXXX R+R QELAGESERALAAXXXXX PPAAG VGGE GKD YEAARGTSRRRLSDG WVAGGASQSQ AAETPVA TPVVAVPSAPPAP GTTPAVHRP PFQLRCPSAPAGG IDGEHGLAA AA E +GRRDGGDPLQLEGFAPARGIEESGR GCPAEGVGGD APATVVSP SSPG P IVEPHPREDGAPDVVNVKRPRE+EEA++ESVAGTERHTSPKRQR+GDTTS AGGVLGACRRG P
Sbjct: 111 QQELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGGYSQGSQATCSESPLPLNGSTDFGEDDILGAMQKLVGQVLLQHQMSARVLYLSALLGISRDLPLFQIHQTKSGSADQQAIRPRTFSDNLRKIGEKFRRGRQVMNLASRTRPISLRCFSFLPDQRTSGDATPYGQEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSKCGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKDQGQLNPSSTRTRSLACIQVTLDTVLRDKAYVLFYTRCPVPAPPAVQRPILPTPSPSLASSSSSPATGGTVAAGADGASSVGKGSPTHAAALXXXXXXXXXXXXXXXXDNESRKRKRFQELAGESERALAAXXXXXXXXPPAAGAAVGGEAGKDPYEAARGTSRRRLSDGIWVAGGASQSQGAAETPVALTPVVAVPSAPPAPSGTTPAVHRPPP-PFQLRCPSAPAGGGIDGEHGLAATAAAAGEGKGRRDGGDPLQLEGFAPARGIEESGRNGCPAEGVGGDAAPATVVSPSSSPGRPYIVEPHPREDGAPDVVNVKRPREDEEAQEESVAGTERHTSPKRQRLGDTTSQAGGVLGACRRGTPTP 873
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 1.190e-135 Identity = 225/372 (60.48%), Postives = 271/372 (72.85%), Query Frame = 1
Query: 7 ELYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPAPPAVQRPILPTPSPS 1122
ELY +S+++A L W++ ++G GL N+GNTC+LN+ LQCLSY+PPLAQHLLNG Y G Q S P G +F + +IL AM++ Q+HQ + AI P+ NLR IG +FR+GRQEDAHEFLRHL+DKMV YL+R+GV A RLAETTPI+ +FGGYLRS+LKC+ CG CSDTFDPFMDL+M++ S GV RS++ ALRRF A E LG+GNEW+CGGC K V AEK+LSVFKPPNALV QLKRF FT K DHI F D LNL VSGPER A YDLTGVVVH+G +MSSGHYYAYVRS AG WARM+D V+KV +TVL+D+AYVLFYTR PAP P P P+ SP+
Sbjct: 246 ELYLDSKIKACLQWKQVHRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGHGPQGIASRGPRPMGGFREFTKVEILAAMEQHTKQVHQGQFTGLG--AISPKVLVQNLRMIGRQFRQGRQEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDL----SRGV----RSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFYTRRPAPQPVVASIPPAPSLSPA 607
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.770e-92 Identity = 156/346 (45.09%), Postives = 209/346 (60.40%), Query Frame = 1
Query: 40 LTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPA 1077
L WR ++G GL+N+GNTC+LN+ LQCL Y PPL QHLLN Y G+ + G Q + + S+ AI P+ N+R IG++FR GRQEDAHEFLR LVD M + L R GV A RL ETT I+ VFGGYLR+Q++C+ C +CS+T++ +MDL++++ N SL+ AL+RF A ETL + N W+CGGC + V A K L++ PNALV LKRF + K H+++ + L+L+VSGPE+R YDL GVVVH G TM GHY+AY+R+S W RM+D+ V L+ +AY+LFYTR P PA
Sbjct: 1 LEWRELSKVGPGLQNLGNTCFLNATLQCLLYCPPLVQHLLNHKY----------------GAPAAAQQAHHGRAQLNLVSNTAAVARSSAYSAISPKTIVANIRTIGKQFRPGRQEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDM--------VGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTIHTAPNALVLHLKRFAYGRQSTKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFYTRTPDPA 322
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC) HSP 1 Score: 288 bits (736), Expect = 1.390e-85 Identity = 158/378 (41.80%), Postives = 226/378 (59.79%), Query Frame = 1
Query: 10 LYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGE--DDILGAMQKLVGQIHQTKSGSAE-------------QQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVE-KVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPAPPAVQR 1095
++PES++ +TW R ++G GL N+GNTC+LN+ LQCL+Y+PPLAQ+ L S + + SP + G G+ LG ++ L+ +H T SG+ + I P+A NL+ + FR GRQEDAHEFLRHL+D + L+ V A RLAETT +H +FGGYLRSQ++C+ CG CS+T+D F+DL++ + KV L+ AL RFTA ETL N W+C C++LV A+K LS PN QLKRF F + K + ++++ + L L +SGPE A Y L GV+VH+G +++ GHYY+ V+++ GCW M+D+ V +V L TVL AY+LFY + PPA+ R
Sbjct: 116 IFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFL--SKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMH-TGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFRVGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGR---------LEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.730e-81 Identity = 155/377 (41.11%), Postives = 223/377 (59.15%), Query Frame = 1
Query: 10 LYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGE--DDILGAMQKLVGQIHQTKSG------------SAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVE-KVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPAPPAVQR 1095
++PES++ +TW R ++G GL N+GNTC+LN+ LQCL+Y+PPLAQ+ L+ + + S P + G G+ LG ++ L+ +H + I P+A NL+ + FR GRQEDAHEFLRHL+D + L+ V A RLAETT +H +FGGYLRSQ++C+ CG CS+T+D F+DL++ + KV L+ AL RFTA ETL N WKC C++LV A+K LS PN QLKRF F + K + ++++ + L L +SGPE A Y L GV+VH+G +++ GHYY+ V+++ GCW M+D+ V +V L TVL+ AY+LFY + PPA+ R
Sbjct: 116 IFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEESVPSVLS--PGAGQGHRGGGQARGGWLGLVRDLIANMHTGXXXXXXXXXXXLARREGGRSPISPKAIVGNLKALNRHFRVGRQEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGR---------LEEALARFTAVETLDRANRWKCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLRQHAYLLFYVKVGPSPPPALDR 481
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA) HSP 1 Score: 288 bits (736), Expect = 2.710e-81 Identity = 158/378 (41.80%), Postives = 226/378 (59.79%), Query Frame = 1
Query: 10 LYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGE--DDILGAMQKLVGQIHQTKSGSAE-------------QQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVE-KVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPAPAPPAVQR 1095
++PES++ +TW R ++G GL N+GNTC+LN+ LQCL+Y+PPLAQ+ L S + + SP + G G+ LG ++ L+ +H T SG+ + I P+A NL+ + FR GRQEDAHEFLRHL+D + L+ V A RLAETT +H +FGGYLRSQ++C+ CG CS+T+D F+DL++ + KV L+ AL RFTA ETL N W+C C++LV A+K LS PN QLKRF F + K + ++++ + L L +SGPE A Y L GV+VH+G +++ GHYY+ V+++ GCW M+D+ V +V L TVL AY+LFY + PPA+ R
Sbjct: 116 IFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFL--SKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMH-TGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFRVGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGR---------LEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A2G5BJ47_COERN (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BJ47_COERN) HSP 1 Score: 265 bits (677), Expect = 3.200e-78 Identity = 152/360 (42.22%), Postives = 209/360 (58.06%), Query Frame = 1
Query: 10 LYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEV----SGPERRANYDLT--GVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTRCPA 1071
L+P Q+ A RP IG GL N+GNTC+LNS+LQCL+Y PPLA+H+L +S G + GE +L + V + + GS+ I P+A L+ + + R GRQEDAHEFLR LVD S L G+DP R+ ETT H VFGGYL+SQ+ C CG+ S+TFDP +D++++++ +++ ALR FT PETL N ++C CNKLVDA K +++++ P L QLKRF G K ++ F LN++ + PER A+YD T V+VH+G T SGHYY +V+S AG W +NDS V +V+ TVL+ AY+LFY RC A
Sbjct: 95 LFPAEQLAAGWQTMRP--IGPGLSNLGNTCFLNSVLQCLTYTPPLAEHMLTREHSAGCRV---------------GESCMLCRFEAHVVRALSKREGSS----ISPKAIVGRLKLVAKHMRVGRQEDAHEFLRLLVDAFQRSLLT--GIDPKIDRRIQETTLTHQVFGGYLQSQVSCGRCGYDSNTFDPLLDISLDIQ---------GGSTIEKALRSFTRPETLTTSNRYRCEKCNKLVDATKQMTIYQLPRILTLQLKRFSVFGGG-KIGRYVEFPLNLNMKSYVSRNSPER-ASYDYTLYAVLVHAGGTSRSGHYYCFVKSPAGVWYELNDSTVHQVSERTVLRQSAYMLFYQRCAA 420
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A197K9E0_9FUNG (Cysteine proteinase (Fragment) n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K9E0_9FUNG) HSP 1 Score: 259 bits (662), Expect = 5.790e-77 Identity = 144/351 (41.03%), Postives = 206/351 (58.69%), Query Frame = 1
Query: 22 SQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTT--CSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLEVSGPERR----ANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFY 1056
S+ + ++ W +P IG GL N+GNTC+LNS+LQCL+Y PLA +LL+G +S +TT C ++ ++ VG+ + +AI P+A LR I ++FR GRQED+HEF R+LVD + S L G D DR+ ETT +H +FGGY +SQ+KC CG S+TF+ ++D++++++ DS +Q A R +T PE L GN++KC C LVDA+K ++++ PN L LKRF FT +K N H+ F L+L + + NY L V+VH+G + SGHYY YV+SS G W MNDS V V+L+TVL AY+LFY
Sbjct: 31 SKEKVHVIWPQPRPIGPGLNNLGNTCFLNSVLQCLTYTAPLANYLLSGHHSNSCKTTNFC-----------------MMCLLETHVGRCFTRQMS----EAISPKAIVGRLRNIAKQFRIGRQEDSHEFARYLVDALQRSCL--LGYDSKLDDRIKETTVVHQIFGGYFQSQVKCLRCGHESNTFETYLDVSLDIKGADS---------VQKAFRDYTTPEILSKGNQYKCEKCKILVDAKKQMTIYDAPNILSIHLKRFTFTG--QKINRHVRFEPTLSLNSFMSKNKDHGDLNYSLYAVLVHAGGSCHSGHYYCYVKSSNGLWYSMNDSHVGVVSLNTVLSQNAYMLFY 347
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Match: A0A485KQZ8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQZ8_9STRA) HSP 1 Score: 266 bits (679), Expect = 3.020e-76 Identity = 162/375 (43.20%), Postives = 217/375 (57.87%), Query Frame = 1
Query: 10 LYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSQTTCSESPFSFNGSTDFGEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRAFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMVGSYLERRGVDPFAHDRLAETTPIHLVFGGYLRSQLKCSGCGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVDAEKNLSVFKPPNALVFQLKRFGFTNGPRKANDHISFGDKLNLE----VSGPERRANYDLTGVVVHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKVTLDTVLKDKAYVLFYTR-CP--APAPPAVQRPILPTP 1113
L + A + W +P +IG GL N+GNTCYLNS+LQCL Y P AQ+LL + + S T NG F + AM +LV Q+H + Q PR NL+++ + FR GRQED+HEF RHL+D M + L++ GV + + A TT +H VFGG LRS ++C+ C F S+ +PF+DL++ + SSG++ +++AAL FTA ETL A N WKCGGC++ A K L++ PNALV LKRF G K HI+F + L+L +S E A Y LT V+VHSG + GHYYA+V+S AG W MND V V + TVL+ +AY+LFYTR P APP V P P
Sbjct: 59 LVASEDIHALVAWEKPRKIGPGLMNLGNTCYLNSVLQCLMYSPAFAQYLLPRAKAAESSTK------QHNG---FHAEK---AMARLVAQMHAPNAPRVTQ----PREIVVNLKQLAKFFRIGRQEDSHEFFRHLMDGMHKASLKQAGVKDTSSE--ATTTLVHSVFGGTLRSHVQCAKCKFVSERLEPFLDLSLEI----SSGIS----TVKAALAHFTAVETLDAENAWKCGGCSQRSRASKGLNIHAVPNALVLHLKRFDAFYG--KLKKHIAFDEVLSLNQGKVLSQAEEHATYTLTAVLVHSGSSPDCGHYYAFVKSPAGTWHEMNDETVRVVNVQTVLQQRAYMLFYTRKLPKVVKAPPVVVAAAAPKP 405 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14931.3752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14931.3752.1 >prot_Ecto-sp13_S_contig14931.3752.1 ID=prot_Ecto-sp13_S_contig14931.3752.1|Name=mRNA_Ecto-sp13_S_contig14931.3752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=681bp QQELYPESQVRANLTWRRPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQback to top mRNA from alignment at Ecto-sp13_S_contig14931:58..4269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14931.3752.1 ID=mRNA_Ecto-sp13_S_contig14931.3752.1|Name=mRNA_Ecto-sp13_S_contig14931.3752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14931:58..4269+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14931:58..4269+ >mRNA_Ecto-sp13_S_contig14931.3752.1 ID=mRNA_Ecto-sp13_S_contig14931.3752.1|Name=mRNA_Ecto-sp13_S_contig14931.3752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2043bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14931:58..4269+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |